Definition Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence.
Accession NC_012724
Length 3,906,507

Click here to switch to the map view.

The map label for this gene is yfcB [C]

Identifier: 238026889

GI number: 238026889

Start: 1376043

End: 1376969

Strand: Reverse

Name: yfcB [C]

Synonym: bglu_1g12570

Alternate gene names: 238026889

Gene position: 1376969-1376043 (Counterclockwise)

Preceding gene: 238026890

Following gene: 238026888

Centisome position: 35.25

GC content: 70.33

Gene sequence:

>927_bases
ATGACGACCCCCACGCCCACCACGCCGTTCCAGACCGTCCGCGACCTGGTCCGCTATGCGGTGACGCGCTTCTCGGCCGC
GCAGCTCGCGTTCGGCCACGGCTCGGACAACGCCTACGACGAAGCCGTCTATCTGGTGCTGCATACGCTGCACCTGCCGC
TCGACACGCTCGAGCCGTTCCTCGACGCGCGCCTGCTGGCCGACGAGATCGACGCGGTATTGCAGCGCATCGAGCGCCGC
GCCGGGGAGCGCCTGCCGGCTGCCTACTTGACCAACGAGGCGTGGATGCACGGCCACCGCTTCTACGTCGACGAGCGCGT
GATCGTGCCGCGCTCGTTCATCGGCGAGTTGCTCGACGACGGCCTGCAGCCCTACGTGGCCGACCCCGAGCAGGTCGGTG
CCGTGCTCGAGCTCTGCACCGGCTCGGGCTGCCTCGCGGTGCTCGCGGCCGAGGCGTTCCCGAACGCCGAGATCGACGCG
GTCGACCTGTCCGAGGACGCTCTCGCCGTGGCCGAGATCAACGTGGCGGACTACCGGCTCGACCACCGCATCGCGCTGCA
CCACGGCGACCTCTACGCGCCGCTGCCCGCCGAGCGGCTCGCCGATCCGGAGCTGCGCTACGACGTGATCCTGAGCAATC
CGCCCTACGTGAACGCCGCCTCGATGGCCGCGCTGCCCGACGAGTACCGCCACGAGCCCGAGATGGCGCTGGCGGGCGGC
GACGACGGCATGGACGTGGTGCGGCGGATCCTGCGCGAGGCGAAGAAGTGGCTGAAGGAAGACGGCGTGCTGGTGGTCGA
GATCGGCAACGAGCGGCCGCACGTCGAGGCCGCGTTCGGCGGGCTCGACCTGATCTGGCTGCCGACCAGCGCCGGCGACG
ACTGCGTGTTCCTGATCCACGCCGCCGATCTGCCGCATTCGGCATAA

Upstream 100 bases:

>100_bases
ATCCACAAGATCGACGAGCACATCGAGCTGCGCTTCGTCGACCCGCTCAAGAACGTGTACCGCCGCGTGCTCGAACAACT
GATCGCCTGACGGAGCCGCC

Downstream 100 bases:

>100_bases
GGCGACGCGGGACGGCCGGCGCGGGACGGATGGCCCGCAACTCGCGCCGGACGGCGCGGTTCGATAAGATGCAGGACCGG
CTGCCGCATCCCGCGGCGCG

Product: N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 308; Mature: 307

Protein sequence:

>308_residues
MTTPTPTTPFQTVRDLVRYAVTRFSAAQLAFGHGSDNAYDEAVYLVLHTLHLPLDTLEPFLDARLLADEIDAVLQRIERR
AGERLPAAYLTNEAWMHGHRFYVDERVIVPRSFIGELLDDGLQPYVADPEQVGAVLELCTGSGCLAVLAAEAFPNAEIDA
VDLSEDALAVAEINVADYRLDHRIALHHGDLYAPLPAERLADPELRYDVILSNPPYVNAASMAALPDEYRHEPEMALAGG
DDGMDVVRRILREAKKWLKEDGVLVVEIGNERPHVEAAFGGLDLIWLPTSAGDDCVFLIHAADLPHSA

Sequences:

>Translated_308_residues
MTTPTPTTPFQTVRDLVRYAVTRFSAAQLAFGHGSDNAYDEAVYLVLHTLHLPLDTLEPFLDARLLADEIDAVLQRIERR
AGERLPAAYLTNEAWMHGHRFYVDERVIVPRSFIGELLDDGLQPYVADPEQVGAVLELCTGSGCLAVLAAEAFPNAEIDA
VDLSEDALAVAEINVADYRLDHRIALHHGDLYAPLPAERLADPELRYDVILSNPPYVNAASMAALPDEYRHEPEMALAGG
DDGMDVVRRILREAKKWLKEDGVLVVEIGNERPHVEAAFGGLDLIWLPTSAGDDCVFLIHAADLPHSA
>Mature_307_residues
TTPTPTTPFQTVRDLVRYAVTRFSAAQLAFGHGSDNAYDEAVYLVLHTLHLPLDTLEPFLDARLLADEIDAVLQRIERRA
GERLPAAYLTNEAWMHGHRFYVDERVIVPRSFIGELLDDGLQPYVADPEQVGAVLELCTGSGCLAVLAAEAFPNAEIDAV
DLSEDALAVAEINVADYRLDHRIALHHGDLYAPLPAERLADPELRYDVILSNPPYVNAASMAALPDEYRHEPEMALAGGD
DGMDVVRRILREAKKWLKEDGVLVVEIGNERPHVEAAFGGLDLIWLPTSAGDDCVFLIHAADLPHSA

Specific function: Unknown

COG id: COG2890

COG function: function code J; Methylase of polypeptide chain release factors

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the N(4)/N(6)-methyltransferase family [H]

Homologues:

Organism=Homo sapiens, GI7705409, Length=254, Percent_Identity=28.3464566929134, Blast_Score=87, Evalue=2e-17,
Organism=Escherichia coli, GI87082085, Length=295, Percent_Identity=47.7966101694915, Blast_Score=285, Evalue=3e-78,
Organism=Escherichia coli, GI1787463, Length=206, Percent_Identity=29.6116504854369, Blast_Score=76, Evalue=2e-15,
Organism=Drosophila melanogaster, GI24582226, Length=199, Percent_Identity=29.1457286432161, Blast_Score=66, Evalue=3e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002052
- InterPro:   IPR004556
- InterPro:   IPR017127
- InterPro:   IPR007848 [H]

Pfam domain/function: PF05175 MTS [H]

EC number: =2.1.1.72 [H]

Molecular weight: Translated: 33891; Mature: 33759

Theoretical pI: Translated: 4.31; Mature: 4.31

Prosite motif: PS00092 N6_MTASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTPTPTTPFQTVRDLVRYAVTRFSAAQLAFGHGSDNAYDEAVYLVLHTLHLPLDTLEPF
CCCCCCCCHHHHHHHHHHHHHHHHHHHHEEECCCCCCHHHHHHHHHHHHHHCCHHHHHHH
LDARLLADEIDAVLQRIERRAGERLPAAYLTNEAWMHGHRFYVDERVIVPRSFIGELLDD
HHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCHHHHCCCEEEECCEEECCHHHHHHHHHC
GLQPYVADPEQVGAVLELCTGSGCLAVLAAEAFPNAEIDAVDLSEDALAVAEINVADYRL
CCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCEEEECCCCCEEEEEEEHHHEEE
DHRIALHHGDLYAPLPAERLADPELRYDVILSNPPYVNAASMAALPDEYRHEPEMALAGG
CCEEEEECCCEECCCCHHHCCCCCCEEEEEECCCCCCCHHHHHHCCHHHCCCCCEEEECC
DDGMDVVRRILREAKKWLKEDGVLVVEIGNERPHVEAAFGGLDLIWLPTSAGDDCVFLIH
CCCHHHHHHHHHHHHHHHHHCCEEEEEECCCCCCEEEECCCEEEEEEECCCCCCEEEEEE
AADLPHSA
ECCCCCCC
>Mature Secondary Structure 
TTPTPTTPFQTVRDLVRYAVTRFSAAQLAFGHGSDNAYDEAVYLVLHTLHLPLDTLEPF
CCCCCCCHHHHHHHHHHHHHHHHHHHHEEECCCCCCHHHHHHHHHHHHHHCCHHHHHHH
LDARLLADEIDAVLQRIERRAGERLPAAYLTNEAWMHGHRFYVDERVIVPRSFIGELLDD
HHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCHHHHCCCEEEECCEEECCHHHHHHHHHC
GLQPYVADPEQVGAVLELCTGSGCLAVLAAEAFPNAEIDAVDLSEDALAVAEINVADYRL
CCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCEEEECCCCCEEEEEEEHHHEEE
DHRIALHHGDLYAPLPAERLADPELRYDVILSNPPYVNAASMAALPDEYRHEPEMALAGG
CCEEEEECCCEECCCCHHHCCCCCCEEEEEECCCCCCCHHHHHHCCHHHCCCCCEEEECC
DDGMDVVRRILREAKKWLKEDGVLVVEIGNERPHVEAAFGGLDLIWLPTSAGDDCVFLIH
CCCHHHHHHHHHHHHHHHHHCCEEEEEECCCCCCEEEECCCEEEEEEECCCCCCEEEEEE
AADLPHSA
ECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10710307 [H]