Definition Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence.
Accession NC_012724
Length 3,906,507

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The map label for this gene is 238026879

Identifier: 238026879

GI number: 238026879

Start: 1364158

End: 1365246

Strand: Direct

Name: 238026879

Synonym: bglu_1g12470

Alternate gene names: NA

Gene position: 1364158-1365246 (Clockwise)

Preceding gene: 238026878

Following gene: 238026880

Centisome position: 34.92

GC content: 74.84

Gene sequence:

>1089_bases
ATGAGCTGGCTTGACTCGGCACTCGACGAAATGGGCCTCGGGCCGCTCTGGGTGCGGCGTAGTGCCGCCGACGCGCCGGC
GGCGGCCGAGGGTGCGGTGGCGCTGGCCGATGACGGGGCCGCGCCGATGCCGGGCGCCGCGCTGGCGCGACCCGCCGCCG
GGCAGCGGCCGGCCGCCTCGGCCACTCGCGACGCGAGCGAGGCGCCCTTGCCGCCGGCCGGCACGGCGGCGCACGAGGCG
GTGCCGCCGCGCGGCGAGCCGGCGCACGCCGGGGCCCGCGCTGCCTCCGCTGCCTCGCTCGATGCCGCCGCCGAGGCGCA
TTCCGCGCCGGCCGCCGCGCGCCGGCGCGAGGCCCGCCCCGACACGGCCGCGCCCGCCGGCGCGGCCGACCAGATGCCGC
CCGACGCCGACCCGTCGCTCGAGGATCCGTCGTGGTTCGATCTGGTGCCCATGTCCGATGCCGGCCACTCATTCGAGCCG
GCGGAGCCGGCCGTCGCGCGCTCGCCCGTGGCCGGACTCGGCTGGGACGAACTGGAGGCGCGCGTCGCCGAATGCCGGCG
CTGCCGGCTTTGCGAGAAGCGCACCCGGACCGTGTTTGGCGTGGGCGACCGCGAGGCCGACTGGATGCTGATCGGCGAGG
CGCCCGGCGAGAACGAGGACAAGCAGGGCGAGCCGTTCGTCGGCCAGGCCGGCAAGCTGCTCGACAGCATGCTGCATGCG
CTGTCGCTCAAGCGCGGCGAGAACGTCTACATCGCGAACGTGATCAAGTGTCGCCCGCCCGGCAACCGCAATCCCGAGCC
CGACGAAGTGGCGCGCTGCGAGCCCTACCTGCAGCGTCAGGTCGAGCTCGTGAAGCCGAAGCTGATCGTCGCGATGGGCC
GCTTCGCCGCGCAGACGCTGCTGAAGTCCACGGGCAGCATCGCCTCGATGCGCGGCCGCATCCATCATTACGAAGGCGTG
CCGGTGGTGGTGTCCTACCATCCTGCCTACCTGCTGCGCAGCCTGCCCGACAAGGCGAAGGCCTGGGCCGATCTGTGCCT
CGCGCGCGACACCATCGGCGGGGCGGGCAAGGCGGCGGGCGACGCATGA

Upstream 100 bases:

>100_bases
GAGACCATCGGCCGGCGCAAGCACTACTACCCGGCGAAGCATCGGATGCGTGAGGACGCGATCGTGATGCGGCTGTCGCT
GAATTCCCAAGGAGGCGCGC

Downstream 100 bases:

>100_bases
CCGCCGTCGTGCAGTCCGTACCGTGGGTCGGGCTGCGCGACACGGCGGTGCGCGATCTCGGCTGGCTGCTGGCCAGCGCC
GACCTGCTGGCGGCTTCGGC

Product: phage SPO1 DNA polymerase-like protein

Products: NA

Alternate protein names: Uracil-DNA Glycosylase; Phage SPO1 DNA Polymerase-Like Protein; DNA Polymerase Bacteriophage-Type; DNA Polymerase; DNA-Directed DNA Polymerase; DNA Polymerase-Related Protein Bacteriophage-Type; Uracil-DNA Glycosylase Family 4 Protein; Uracil DNA Glycosylase Superfamily Protein; Phage Spo1 DNA Polymerase-Related Protein; DNA Glycosylase; Bacteriophage-Related DNA Polymerase; N-Terminus Of Bacteriophage-Type DNA Polymerase; DNA Polymerase-Related Protein; Phage SPO1 DNA Polymerase Domain-Containing Protein; DNA Polymerase Domain-Containing Protein; Phage Related DNA Polymerase; Uracil-DNA Glycosylase C-Terminal; Phage SpO1 DNA Polymerase-Related Protein; Arginine Biosynthesis Bifunctional Protein ArgJ; Bacteriophage-Type DNA Polymerase; DNA Polymerase Related Protein; Uracil DNA Glycosylase; Phage DNA Polymerase-Related Protein; DNA-Directed DNA Polymerase Bacteriophage-Type; Uracil-DNA Glycosylase Phage-Related Protein; Uracil-DNA Glycosylase Superfamily Protein; Phage Shock Protein E; C-Terminal Part Of DNA Polymerase Bacteriophage-Type; Phage DNA Polymerase; Phage Spo1 DNA Polymerase Domain Protein; Uracil-DNA Glycosylase C-Terminal Domain Protein; Uracil-DNA Glycosylase-Like Protein; Uracil-DNA Glycosylase-Related Protein; Bacteriophage-Type DNA Polymerase N-Terminal Domain Protein

Number of amino acids: Translated: 362; Mature: 361

Protein sequence:

>362_residues
MSWLDSALDEMGLGPLWVRRSAADAPAAAEGAVALADDGAAPMPGAALARPAAGQRPAASATRDASEAPLPPAGTAAHEA
VPPRGEPAHAGARAASAASLDAAAEAHSAPAAARRREARPDTAAPAGAADQMPPDADPSLEDPSWFDLVPMSDAGHSFEP
AEPAVARSPVAGLGWDELEARVAECRRCRLCEKRTRTVFGVGDREADWMLIGEAPGENEDKQGEPFVGQAGKLLDSMLHA
LSLKRGENVYIANVIKCRPPGNRNPEPDEVARCEPYLQRQVELVKPKLIVAMGRFAAQTLLKSTGSIASMRGRIHHYEGV
PVVVSYHPAYLLRSLPDKAKAWADLCLARDTIGGAGKAAGDA

Sequences:

>Translated_362_residues
MSWLDSALDEMGLGPLWVRRSAADAPAAAEGAVALADDGAAPMPGAALARPAAGQRPAASATRDASEAPLPPAGTAAHEA
VPPRGEPAHAGARAASAASLDAAAEAHSAPAAARRREARPDTAAPAGAADQMPPDADPSLEDPSWFDLVPMSDAGHSFEP
AEPAVARSPVAGLGWDELEARVAECRRCRLCEKRTRTVFGVGDREADWMLIGEAPGENEDKQGEPFVGQAGKLLDSMLHA
LSLKRGENVYIANVIKCRPPGNRNPEPDEVARCEPYLQRQVELVKPKLIVAMGRFAAQTLLKSTGSIASMRGRIHHYEGV
PVVVSYHPAYLLRSLPDKAKAWADLCLARDTIGGAGKAAGDA
>Mature_361_residues
SWLDSALDEMGLGPLWVRRSAADAPAAAEGAVALADDGAAPMPGAALARPAAGQRPAASATRDASEAPLPPAGTAAHEAV
PPRGEPAHAGARAASAASLDAAAEAHSAPAAARRREARPDTAAPAGAADQMPPDADPSLEDPSWFDLVPMSDAGHSFEPA
EPAVARSPVAGLGWDELEARVAECRRCRLCEKRTRTVFGVGDREADWMLIGEAPGENEDKQGEPFVGQAGKLLDSMLHAL
SLKRGENVYIANVIKCRPPGNRNPEPDEVARCEPYLQRQVELVKPKLIVAMGRFAAQTLLKSTGSIASMRGRIHHYEGVP
VVVSYHPAYLLRSLPDKAKAWADLCLARDTIGGAGKAAGDA

Specific function: Unknown

COG id: COG1573

COG function: function code L; Uracil-DNA glycosylase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 37861; Mature: 37730

Theoretical pI: Translated: 5.46; Mature: 5.46

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSWLDSALDEMGLGPLWVRRSAADAPAAAEGAVALADDGAAPMPGAALARPAAGQRPAAS
CCHHHHHHHHHCCCHHHHCCCCCCCCCCCCCCEEEECCCCCCCCCHHHCCCCCCCCCCCH
ATRDASEAPLPPAGTAAHEAVPPRGEPAHAGARAASAASLDAAAEAHSAPAAARRREARP
HCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHCCC
DTAAPAGAADQMPPDADPSLEDPSWFDLVPMSDAGHSFEPAEPAVARSPVAGLGWDELEA
CCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCHHHCCCCCCCCHHHHHH
RVAECRRCRLCEKRTRTVFGVGDREADWMLIGEAPGENEDKQGEPFVGQAGKLLDSMLHA
HHHHHHHHHHHHHHCCEEEECCCCCCCEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHH
LSLKRGENVYIANVIKCRPPGNRNPEPDEVARCEPYLQRQVELVKPKLIVAMGRFAAQTL
HHHHCCCCEEEEEEEEECCCCCCCCCHHHHHHHCHHHHHHHHHHCHHHHHHHHHHHHHHH
LKSTGSIASMRGRIHHYEGVPVVVSYHPAYLLRSLPDKAKAWADLCLARDTIGGAGKAAG
HHHCCCHHHHHCCCEECCCCEEEEECCHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCC
DA
CC
>Mature Secondary Structure 
SWLDSALDEMGLGPLWVRRSAADAPAAAEGAVALADDGAAPMPGAALARPAAGQRPAAS
CHHHHHHHHHCCCHHHHCCCCCCCCCCCCCCEEEECCCCCCCCCHHHCCCCCCCCCCCH
ATRDASEAPLPPAGTAAHEAVPPRGEPAHAGARAASAASLDAAAEAHSAPAAARRREARP
HCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHCCC
DTAAPAGAADQMPPDADPSLEDPSWFDLVPMSDAGHSFEPAEPAVARSPVAGLGWDELEA
CCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCHHHCCCCCCCCHHHHHH
RVAECRRCRLCEKRTRTVFGVGDREADWMLIGEAPGENEDKQGEPFVGQAGKLLDSMLHA
HHHHHHHHHHHHHHCCEEEECCCCCCCEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHH
LSLKRGENVYIANVIKCRPPGNRNPEPDEVARCEPYLQRQVELVKPKLIVAMGRFAAQTL
HHHHCCCCEEEEEEEEECCCCCCCCCHHHHHHHCHHHHHHHHHHCHHHHHHHHHHHHHHH
LKSTGSIASMRGRIHHYEGVPVVVSYHPAYLLRSLPDKAKAWADLCLARDTIGGAGKAAG
HHHCCCHHHHHCCCEECCCCEEEEECCHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCC
DA
CC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA