Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
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Accession | NC_012724 |
Length | 3,906,507 |
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The map label for this gene is rimI [H]
Identifier: 238026878
GI number: 238026878
Start: 1363674
End: 1364171
Strand: Direct
Name: rimI [H]
Synonym: bglu_1g12460
Alternate gene names: 238026878
Gene position: 1363674-1364171 (Clockwise)
Preceding gene: 238026877
Following gene: 238026879
Centisome position: 34.91
GC content: 66.27
Gene sequence:
>498_bases ATGAGCGGCGTGCTGATGACCGACCGTTACCTCGCGCCGATGACCGATGCCGACCTGGACGAGGTGGTGGCGATCGAGAA GGTCGCCTACGAGTTTCCGTGGTCGCGCGGCAATTTCGAGGATTCGCTGCGCAACGGCTATTTCGGCGTTTGCATGCGGC ATGTGACGGGTACGCTGCTCGGCTATTGCGTGCTGATGCCGGTGGTTGACGAGATGCATCTGCTGAACCTGTGCGTGGCG CCGGTCGCGCAGCGCAGCGGCTGCGGCCTGGCGCTGCTGCGCGAGGCGGTGCGGCTCACGCGGGCCGAGCGGCTGGTGGG CGTGCTGCTCGAGGTGCGGCCCTCGAATCCGCGCGCGATCGAGCTGTACGAGCGCTTCGGCTTCGAGACCATCGGCCGGC GCAAGCACTACTACCCGGCGAAGCATCGGATGCGTGAGGACGCGATCGTGATGCGGCTGTCGCTGAATTCCCAAGGAGGC GCGCATGAGCTGGCTTGA
Upstream 100 bases:
>100_bases ACTACGTCCGCAACAAGGTCGCGCAGACCACGGCCGAGCGGCTTGCCGCGCGTGCGGGCGCGAAGGGCGGGGAGCGCGCG GGGGGGAAGGGGAGCGGCCG
Downstream 100 bases:
>100_bases CTCGGCACTCGACGAAATGGGCCTCGGGCCGCTCTGGGTGCGGCGTAGTGCCGCCGACGCGCCGGCGGCGGCCGAGGGTG CGGTGGCGCTGGCCGATGAC
Product: Ribosomal-protein-alanine acetyltransferase
Products: NA
Alternate protein names: Acetylating enzyme for N-terminal of ribosomal protein S18 [H]
Number of amino acids: Translated: 165; Mature: 164
Protein sequence:
>165_residues MSGVLMTDRYLAPMTDADLDEVVAIEKVAYEFPWSRGNFEDSLRNGYFGVCMRHVTGTLLGYCVLMPVVDEMHLLNLCVA PVAQRSGCGLALLREAVRLTRAERLVGVLLEVRPSNPRAIELYERFGFETIGRRKHYYPAKHRMREDAIVMRLSLNSQGG AHELA
Sequences:
>Translated_165_residues MSGVLMTDRYLAPMTDADLDEVVAIEKVAYEFPWSRGNFEDSLRNGYFGVCMRHVTGTLLGYCVLMPVVDEMHLLNLCVA PVAQRSGCGLALLREAVRLTRAERLVGVLLEVRPSNPRAIELYERFGFETIGRRKHYYPAKHRMREDAIVMRLSLNSQGG AHELA >Mature_164_residues SGVLMTDRYLAPMTDADLDEVVAIEKVAYEFPWSRGNFEDSLRNGYFGVCMRHVTGTLLGYCVLMPVVDEMHLLNLCVAP VAQRSGCGLALLREAVRLTRAERLVGVLLEVRPSNPRAIELYERFGFETIGRRKHYYPAKHRMREDAIVMRLSLNSQGGA HELA
Specific function: This enzyme acetylates the N-terminal alanine of ribosomal protein S18 [H]
COG id: COG0456
COG function: function code R; Acetyltransferases
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 N-acetyltransferase domain [H]
Homologues:
Organism=Escherichia coli, GI2367381, Length=146, Percent_Identity=34.2465753424658, Blast_Score=87, Evalue=8e-19,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000182 - InterPro: IPR016181 - InterPro: IPR006464 [H]
Pfam domain/function: PF00583 Acetyltransf_1 [H]
EC number: =2.3.1.128 [H]
Molecular weight: Translated: 18629; Mature: 18498
Theoretical pI: Translated: 7.50; Mature: 7.50
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 4.8 %Met (Translated Protein) 7.3 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 4.3 %Met (Mature Protein) 6.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSGVLMTDRYLAPMTDADLDEVVAIEKVAYEFPWSRGNFEDSLRNGYFGVCMRHVTGTLL CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHCCHHHHHHHHHHHHHH GYCVLMPVVDEMHLLNLCVAPVAQRSGCGLALLREAVRLTRAERLVGVLLEVRPSNPRAI HHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEE ELYERFGFETIGRRKHYYPAKHRMREDAIVMRLSLNSQGGAHELA HHHHHHCHHHHCCCCCCCCHHHHHCCCCEEEEEECCCCCCCCCCC >Mature Secondary Structure SGVLMTDRYLAPMTDADLDEVVAIEKVAYEFPWSRGNFEDSLRNGYFGVCMRHVTGTLL CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHCCHHHHHHHHHHHHHH GYCVLMPVVDEMHLLNLCVAPVAQRSGCGLALLREAVRLTRAERLVGVLLEVRPSNPRAI HHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEE ELYERFGFETIGRRKHYYPAKHRMREDAIVMRLSLNSQGGAHELA HHHHHHCHHHHCCCCCCCCHHHHHCCCCEEEEEECCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]