Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
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Accession | NC_012724 |
Length | 3,906,507 |
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The map label for this gene is yeaZ [H]
Identifier: 238026877
GI number: 238026877
Start: 1362871
End: 1363677
Strand: Direct
Name: yeaZ [H]
Synonym: bglu_1g12450
Alternate gene names: 238026877
Gene position: 1362871-1363677 (Clockwise)
Preceding gene: 238026873
Following gene: 238026878
Centisome position: 34.89
GC content: 77.2
Gene sequence:
>807_bases ATGTCGGCCATGACGCAAAACGTGCTCCTCGCCATCGATACCTCGACCGAATTCTGCTCGGTCGCCCTGATTGCCGCGTC CGCCGGGGCGGACGCTTCCACCGCCACGCCGCGCGTCTGGTTCCGCCACGACGAGACGGGCGCCGTCTCCAGCACGCGCG TGCTGCCCGCCGTGCGCGAGCTGCTCGACGAGGCCGGCCGCACGCTCGCCGATTGCGCCGCGATCGCGTTCGGCGCCGGC CCCGGTTCGTTCACCGGACTGCGCACCGCCACCGGCGTCGCGCAGGGGCTCGCGTTCGGCCGCGACCTGCCGGTCGTGCC GGTCGGCACGCTGCTCGCCTGCGCCGAGCATGCGCGGCTCAACGCGCTCGAGGCGGGCCGCGAGCCGCCCGCGCGCGTGC TCGCCGCACTCGACGCGCGCATGGACGAAGCCTACTGGGCCGACTATGCATGGGATGCCGCCGCCGCGGACTGGCGCGTG CTGCAGCCGGCCTCGCTCGACGCGCCGGCCGCGCTGGTGGCGCCGGACGCCGCGTTCGTGCTGGCCGGCAACGCCGCCGC CGCGTTCGGCGCGCGGCTGCCGGCCGCCGCGCGCGCCGCGTTCGTCGATGCCGCCGCGCTGCCGCACGCCGTGCCGCTCG CCCATGTCGCGCTGCGCGCGTTTCGCGCCGGGCGCACCGTGCCGGCCGACCAGGCGGCGCCCGACTACGTCCGCAACAAG GTCGCGCAGACCACGGCCGAGCGGCTTGCCGCGCGTGCGGGCGCGAAGGGCGGGGAGCGCGCGGGGGGGAAGGGGAGCGG CCGATGA
Upstream 100 bases:
>100_bases GGCCGCCGCGCGGCTCGAACCTTTCTTCCAAACCGCGCCGGCGCCGCGAGCGCCATGCCGGCCGCCGGAAAGACCCGGCA TGGCGAGGTGCCGCATTACA
Downstream 100 bases:
>100_bases GCGGCGTGCTGATGACCGACCGTTACCTCGCGCCGATGACCGATGCCGACCTGGACGAGGTGGTGGCGATCGAGAAGGTC GCCTACGAGTTTCCGTGGTC
Product: peptidase M22, glycoprotease
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 268; Mature: 267
Protein sequence:
>268_residues MSAMTQNVLLAIDTSTEFCSVALIAASAGADASTATPRVWFRHDETGAVSSTRVLPAVRELLDEAGRTLADCAAIAFGAG PGSFTGLRTATGVAQGLAFGRDLPVVPVGTLLACAEHARLNALEAGREPPARVLAALDARMDEAYWADYAWDAAAADWRV LQPASLDAPAALVAPDAAFVLAGNAAAAFGARLPAAARAAFVDAAALPHAVPLAHVALRAFRAGRTVPADQAAPDYVRNK VAQTTAERLAARAGAKGGERAGGKGSGR
Sequences:
>Translated_268_residues MSAMTQNVLLAIDTSTEFCSVALIAASAGADASTATPRVWFRHDETGAVSSTRVLPAVRELLDEAGRTLADCAAIAFGAG PGSFTGLRTATGVAQGLAFGRDLPVVPVGTLLACAEHARLNALEAGREPPARVLAALDARMDEAYWADYAWDAAAADWRV LQPASLDAPAALVAPDAAFVLAGNAAAAFGARLPAAARAAFVDAAALPHAVPLAHVALRAFRAGRTVPADQAAPDYVRNK VAQTTAERLAARAGAKGGERAGGKGSGR >Mature_267_residues SAMTQNVLLAIDTSTEFCSVALIAASAGADASTATPRVWFRHDETGAVSSTRVLPAVRELLDEAGRTLADCAAIAFGAGP GSFTGLRTATGVAQGLAFGRDLPVVPVGTLLACAEHARLNALEAGREPPARVLAALDARMDEAYWADYAWDAAAADWRVL QPASLDAPAALVAPDAAFVLAGNAAAAFGARLPAAARAAFVDAAALPHAVPLAHVALRAFRAGRTVPADQAAPDYVRNKV AQTTAERLAARAGAKGGERAGGKGSGR
Specific function: Unknown
COG id: COG1214
COG function: function code O; Inactive homolog of metal-dependent proteases, putative molecular chaperone
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the peptidase M22 family [H]
Homologues:
Organism=Escherichia coli, GI1788109, Length=242, Percent_Identity=37.1900826446281, Blast_Score=122, Evalue=2e-29,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR022496 - InterPro: IPR000905 [H]
Pfam domain/function: PF00814 Peptidase_M22 [H]
EC number: NA
Molecular weight: Translated: 27247; Mature: 27116
Theoretical pI: Translated: 6.94; Mature: 6.94
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSAMTQNVLLAIDTSTEFCSVALIAASAGADASTATPRVWFRHDETGAVSSTRVLPAVRE CCCCCCCEEEEEECCCCHHHHHHHEECCCCCCCCCCCEEEEEECCCCCCCHHHHHHHHHH LLDEAGRTLADCAAIAFGAGPGSFTGLRTATGVAQGLAFGRDLPVVPVGTLLACAEHARL HHHHHCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHH NALEAGREPPARVLAALDARMDEAYWADYAWDAAAADWRVLQPASLDAPAALVAPDAAFV HHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEECCCCCCCCCEEECCCCEEE LAGNAAAAFGARLPAAARAAFVDAAALPHAVPLAHVALRAFRAGRTVPADQAAPDYVRNK EECCHHHHHHHCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHH VAQTTAERLAARAGAKGGERAGGKGSGR HHHHHHHHHHHHHCCCCCCCCCCCCCCC >Mature Secondary Structure SAMTQNVLLAIDTSTEFCSVALIAASAGADASTATPRVWFRHDETGAVSSTRVLPAVRE CCCCCCEEEEEECCCCHHHHHHHEECCCCCCCCCCCEEEEEECCCCCCCHHHHHHHHHH LLDEAGRTLADCAAIAFGAGPGSFTGLRTATGVAQGLAFGRDLPVVPVGTLLACAEHARL HHHHHCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHH NALEAGREPPARVLAALDARMDEAYWADYAWDAAAADWRVLQPASLDAPAALVAPDAAFV HHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEECCCCCCCCCEEECCCCEEE LAGNAAAAFGARLPAAARAAFVDAAALPHAVPLAHVALRAFRAGRTVPADQAAPDYVRNK EECCHHHHHHHCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHH VAQTTAERLAARAGAKGGERAGGKGSGR HHHHHHHHHHHHHCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9097040; 9278503 [H]