| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
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The map label for this gene is 238026858
Identifier: 238026858
GI number: 238026858
Start: 1337290
End: 1337652
Strand: Direct
Name: 238026858
Synonym: bglu_1g12260
Alternate gene names: NA
Gene position: 1337290-1337652 (Clockwise)
Preceding gene: 238026857
Following gene: 238026859
Centisome position: 34.23
GC content: 70.25
Gene sequence:
>363_bases ATGAAAAGCTTGCGTGTTGCTTCGCTCGTGACTGGTCTGGCTGCGTTGTTCGTGTCCGGCGCCGCAATGGCGGGCGTCAA TATCGGCATCAATCTGGGGGCGCCGGCCTACGTGGCGCCGGCGCCGGTCTATGCGCCGCCGCCTCCCGTCGTCTATCAGC CCGCACCGGTCTATGCGCCGCCGCCCGCAATCGTGATCGGCTGGCACGGCGATCGTTACTGGGATGGCCGCCGCTACTGG GGCCGCGAGGAATGGTATCGCCGCCACGGCGGCTGGCATGGCGACGGTCCGGGTTGGCACGGTGGTCCGGGTTGGCGCGG CGGCCCGGGCTGGCACGGCGATCACGGCGGCTGGCGCCACTGA
Upstream 100 bases:
>100_bases GCGCGACGCCACGCATCAGTTCTTACAAAGTGGAAATATGCGGGTGGGGCGTGAGTCGTTATAGTCGAATCACCTAATCA AACCACCGTAAGGGGACTCC
Downstream 100 bases:
>100_bases CGCCGGCGCGGTGCGGGCCGGCGGCCATGCCGGCGCCGTACGGACCGACGGCTGGCGCGCGTCACGCGCGCTCGAAATAC CGCCCGGCTGCGGGCGGTTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 120; Mature: 120
Protein sequence:
>120_residues MKSLRVASLVTGLAALFVSGAAMAGVNIGINLGAPAYVAPAPVYAPPPPVVYQPAPVYAPPPAIVIGWHGDRYWDGRRYW GREEWYRRHGGWHGDGPGWHGGPGWRGGPGWHGDHGGWRH
Sequences:
>Translated_120_residues MKSLRVASLVTGLAALFVSGAAMAGVNIGINLGAPAYVAPAPVYAPPPPVVYQPAPVYAPPPAIVIGWHGDRYWDGRRYW GREEWYRRHGGWHGDGPGWHGGPGWRGGPGWHGDHGGWRH >Mature_120_residues MKSLRVASLVTGLAALFVSGAAMAGVNIGINLGAPAYVAPAPVYAPPPPVVYQPAPVYAPPPAIVIGWHGDRYWDGRRYW GREEWYRRHGGWHGDGPGWHGGPGWRGGPGWHGDHGGWRH
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12951; Mature: 12951
Theoretical pI: Translated: 9.95; Mature: 9.95
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKSLRVASLVTGLAALFVSGAAMAGVNIGINLGAPAYVAPAPVYAPPPPVVYQPAPVYAP CCCCHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCEECCCCCCCCCCCCEECCCCCCCC PPAIVIGWHGDRYWDGRRYWGREEWYRRHGGWHGDGPGWHGGPGWRGGPGWHGDHGGWRH CCEEEEECCCCEEECCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MKSLRVASLVTGLAALFVSGAAMAGVNIGINLGAPAYVAPAPVYAPPPPVVYQPAPVYAP CCCCHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCEECCCCCCCCCCCCEECCCCCCCC PPAIVIGWHGDRYWDGRRYWGREEWYRRHGGWHGDGPGWHGGPGWRGGPGWHGDHGGWRH CCEEEEECCCCEEECCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA