Definition Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence.
Accession NC_012724
Length 3,906,507

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The map label for this gene is yejA [C]

Identifier: 238026859

GI number: 238026859

Start: 1338031

End: 1339857

Strand: Direct

Name: yejA [C]

Synonym: bglu_1g12270

Alternate gene names: 238026859

Gene position: 1338031-1339857 (Clockwise)

Preceding gene: 238026858

Following gene: 238026860

Centisome position: 34.25

GC content: 68.42

Gene sequence:

>1827_bases
TTGACGGCCGTGCTGCTGGCCCTCTGCGGTGCCGCCGCGCCGCTTTCCGCCCACGCGGCCTATGCGATCGCCCAATACGG
GGAGCCGAAATACCCGCCCGGCTTCCGGCATTTCGACTACGTGAATCCCGATGCGCCGAAGGGCGGTACGCTGGTGCTCG
CGAACCCGAACCGGCTCACCACCTTCGACAAGTTCAATCCGTTCACGCTGCGCGGCAACCCGGCCCCCGGGCTCGGCACG
ATCTTCGAAAGCCTGACCACCGGCAGCGCCGACGAGCCGGCGAGTGCCTATGGGCTGCTCGCCGACGACATCGCGATTGC
CCCGGACCACCTGTCGGTGACGTTCCACCTGAACCCGCGCGCGCGCTTCTCGAACGGCGACCCGGTCACGGCGGCCGACG
TCAAGTATTCGTTCGATACGCTGAAGAGCCCGCAGGCCGCGCCGCAGTATGCCGCCTATTTCTCCGAGATCGCGCGCGTG
GTGGTGGTCGATCCGGCCACGGTACGCTTCGAGTTCACGCGCACCGACCGCGAGCTGCCGCTGATCGCGGGTGCCGTGCC
GGTGTTCTCGCGCAAGTGGGGGGCGAGGCCGGACGGCACGCGGGTGCCGTTCGACCAGCTCGCGTTCCAGCCGCCGATCG
GCAGCGGCCCCTATCTGATCGACCACTATGACAGCGGGCGCACCATCACTTACCGGCGCGATCCCCACTACTGGGGGGCC
GCGCTGCCGGTGCGGGTCGGCACCGACAACTTCGACCGGATCGTCTACAAGCTCTATGGCGACAGCGTCGCGCGGCTCGA
GGCCTTCAAGGCCGGCGAGTACGACGTGCTGGTCGAATACATCGCGCGCAACTGGGTACGGCGCGACGTGGGCAAGCGTT
TCGACGACGGCGAGCTGATCAAGCGCGAGTTTCGCCAGCACAACGGCGCCGGCATGCAGGGCTTCCTGATGAACCTGCGC
CGGCCGCTGTTTCAGGACGTGCGCGTGCGCGAGGCGCTCGATCTCGCATTCGATTTCGAATGGCTGAACCGGCAGCTGTT
CTACGGCGGCTACACGCGCCTGAACAGCTACTTCGCCGACACCGAACTGCAGGCGCGCGGCACGCCGGGCGCGGGCGAGC
TAGCGATCCTCGAGCCGCTGCGCAAGCAGCTCGACCCGGCCGTGTTCGGACCGATGCCGGTGCAGCCCGACACGAACCCG
CCCGGCTCGCTGCGCGCCAATCTGCTCAAGGCGCGCGCGCTGCTGGCCGAGGCCGGCTGGACCTATCGCGACGGCGCGCT
GCGCAACGCGAAGGGCGAGCCGTTCCGCTTCGAGATCCTCGACGATTCGGGCGGCGGGATGGAACCGGTGGTCACCGCCT
ATCAGCGCAATCTTGCCAAGCTCGGCATCGAGGCGCGCTTTCGCACCGCCGATTTCGCGCTGCTGCAAAAGCGCCTCGAC
GCGTTCGACTACGATATGACGACGGTGCGCTATCCGGGCGTGCAGGTGCCCGGCGCCGAGCAGGCCACGCGCTTCGCGAG
CCGCTATGCGGACCAGCCCGGCTCGAGCAATCTGATCGGGCTGAAGTCGCCGGCCGTCGACGCGATCCTGAAGGCGCTGC
TGCAGGCGCAGACGCGCGAGCAACTGCTCGACGCCACCCACGCGCTCGACCGCGTGCTGATGCACGGCTACTACGTGGTG
CCGCAGTGGTACAGCACGGTGCACCGCGTCGCCTACCAGCACACGCTCGCCTATCCGGCCACGCTGCCGCTGTACTATTC
GGCCGATGACTGGGTGGCGTCGATGTGGTGGGCGAAACCCGACGCGGCGGCGCACCCTGCACCTTGA

Upstream 100 bases:

>100_bases
TTCCGCCTTCATGCCGACTTCCCCGTTTCGGGCCGCCGTGCCTCGTCGTGTTTCCGATGTCCGTGTCCCGGATGGCCGCG
AGCCCGGCTGGTGGCGCTGG

Downstream 100 bases:

>100_bases
GCGCCTCGCCGCATTCCGCATGCGGCGGCCGGGCCGGCCGCCGCTTCCTCAACCGCGCCGCGCGCGCCGCATGCCGACCT
CGCCTATGTGGAGCTATATC

Product: family 5 extracellular solute-binding protein

Products: ADP; phosphate; oligopeptides [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 608; Mature: 607

Protein sequence:

>608_residues
MTAVLLALCGAAAPLSAHAAYAIAQYGEPKYPPGFRHFDYVNPDAPKGGTLVLANPNRLTTFDKFNPFTLRGNPAPGLGT
IFESLTTGSADEPASAYGLLADDIAIAPDHLSVTFHLNPRARFSNGDPVTAADVKYSFDTLKSPQAAPQYAAYFSEIARV
VVVDPATVRFEFTRTDRELPLIAGAVPVFSRKWGARPDGTRVPFDQLAFQPPIGSGPYLIDHYDSGRTITYRRDPHYWGA
ALPVRVGTDNFDRIVYKLYGDSVARLEAFKAGEYDVLVEYIARNWVRRDVGKRFDDGELIKREFRQHNGAGMQGFLMNLR
RPLFQDVRVREALDLAFDFEWLNRQLFYGGYTRLNSYFADTELQARGTPGAGELAILEPLRKQLDPAVFGPMPVQPDTNP
PGSLRANLLKARALLAEAGWTYRDGALRNAKGEPFRFEILDDSGGGMEPVVTAYQRNLAKLGIEARFRTADFALLQKRLD
AFDYDMTTVRYPGVQVPGAEQATRFASRYADQPGSSNLIGLKSPAVDAILKALLQAQTREQLLDATHALDRVLMHGYYVV
PQWYSTVHRVAYQHTLAYPATLPLYYSADDWVASMWWAKPDAAAHPAP

Sequences:

>Translated_608_residues
MTAVLLALCGAAAPLSAHAAYAIAQYGEPKYPPGFRHFDYVNPDAPKGGTLVLANPNRLTTFDKFNPFTLRGNPAPGLGT
IFESLTTGSADEPASAYGLLADDIAIAPDHLSVTFHLNPRARFSNGDPVTAADVKYSFDTLKSPQAAPQYAAYFSEIARV
VVVDPATVRFEFTRTDRELPLIAGAVPVFSRKWGARPDGTRVPFDQLAFQPPIGSGPYLIDHYDSGRTITYRRDPHYWGA
ALPVRVGTDNFDRIVYKLYGDSVARLEAFKAGEYDVLVEYIARNWVRRDVGKRFDDGELIKREFRQHNGAGMQGFLMNLR
RPLFQDVRVREALDLAFDFEWLNRQLFYGGYTRLNSYFADTELQARGTPGAGELAILEPLRKQLDPAVFGPMPVQPDTNP
PGSLRANLLKARALLAEAGWTYRDGALRNAKGEPFRFEILDDSGGGMEPVVTAYQRNLAKLGIEARFRTADFALLQKRLD
AFDYDMTTVRYPGVQVPGAEQATRFASRYADQPGSSNLIGLKSPAVDAILKALLQAQTREQLLDATHALDRVLMHGYYVV
PQWYSTVHRVAYQHTLAYPATLPLYYSADDWVASMWWAKPDAAAHPAP
>Mature_607_residues
TAVLLALCGAAAPLSAHAAYAIAQYGEPKYPPGFRHFDYVNPDAPKGGTLVLANPNRLTTFDKFNPFTLRGNPAPGLGTI
FESLTTGSADEPASAYGLLADDIAIAPDHLSVTFHLNPRARFSNGDPVTAADVKYSFDTLKSPQAAPQYAAYFSEIARVV
VVDPATVRFEFTRTDRELPLIAGAVPVFSRKWGARPDGTRVPFDQLAFQPPIGSGPYLIDHYDSGRTITYRRDPHYWGAA
LPVRVGTDNFDRIVYKLYGDSVARLEAFKAGEYDVLVEYIARNWVRRDVGKRFDDGELIKREFRQHNGAGMQGFLMNLRR
PLFQDVRVREALDLAFDFEWLNRQLFYGGYTRLNSYFADTELQARGTPGAGELAILEPLRKQLDPAVFGPMPVQPDTNPP
GSLRANLLKARALLAEAGWTYRDGALRNAKGEPFRFEILDDSGGGMEPVVTAYQRNLAKLGIEARFRTADFALLQKRLDA
FDYDMTTVRYPGVQVPGAEQATRFASRYADQPGSSNLIGLKSPAVDAILKALLQAQTREQLLDATHALDRVLMHGYYVVP
QWYSTVHRVAYQHTLAYPATLPLYYSADDWVASMWWAKPDAAAHPAP

Specific function: Possible binding-protein with either a transport or enzymatic activity [H]

COG id: COG4166

COG function: function code E; ABC-type oligopeptide transport system, periplasmic component

Gene ontology:

Cell location: Periplasm (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial solute-binding protein 5 family [H]

Homologues:

Organism=Escherichia coli, GI87082063, Length=588, Percent_Identity=38.6054421768707, Blast_Score=386, Evalue=1e-108,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000914 [H]

Pfam domain/function: PF00496 SBP_bac_5 [H]

EC number: NA

Molecular weight: Translated: 67495; Mature: 67364

Theoretical pI: Translated: 7.18; Mature: 7.18

Prosite motif: PS00210 HEMOCYANIN_2 ; PS01310 FXYD

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTAVLLALCGAAAPLSAHAAYAIAQYGEPKYPPGFRHFDYVNPDAPKGGTLVLANPNRLT
CHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCC
TFDKFNPFTLRGNPAPGLGTIFESLTTGSADEPASAYGLLADDIAIAPDHLSVTFHLNPR
EECCCCCEEEECCCCCCHHHHHHHHHCCCCCCCCHHHCEEHHCEEECCCCEEEEEEECCC
ARFSNGDPVTAADVKYSFDTLKSPQAAPQYAAYFSEIARVVVVDPATVRFEFTRTDRELP
CCCCCCCCCEEEEEEECHHHCCCCCCCHHHHHHHHHCCEEEEECCCEEEEEEECCCCCCC
LIAGAVPVFSRKWGARPDGTRVPFDQLAFQPPIGSGPYLIDHYDSGRTITYRRDPHYWGA
EEECCCHHHHHCCCCCCCCCCCCHHHHCCCCCCCCCCEEEEEECCCCEEEEECCCCCCCC
ALPVRVGTDNFDRIVYKLYGDSVARLEAFKAGEYDVLVEYIARNWVRRDVGKRFDDGELI
EEEEEECCCCHHHHHHHHHCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHH
KREFRQHNGAGMQGFLMNLRRPLFQDVRVREALDLAFDFEWLNRQLFYGGYTRLNSYFAD
HHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCHHHHHHHHCC
TELQARGTPGAGELAILEPLRKQLDPAVFGPMPVQPDTNPPGSLRANLLKARALLAEAGW
CEEEECCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCC
TYRDGALRNAKGEPFRFEILDDSGGGMEPVVTAYQRNLAKLGIEARFRTADFALLQKRLD
EECCCCCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHCCHHEECHHHHHHHHHHHH
AFDYDMTTVRYPGVQVPGAEQATRFASRYADQPGSSNLIGLKSPAVDAILKALLQAQTRE
HHCCCCEEEECCCCCCCCHHHHHHHHHHHCCCCCCCCEEECCCHHHHHHHHHHHHHHHHH
QLLDATHALDRVLMHGYYVVPQWYSTVHRVAYQHTLAYPATLPLYYSADDWVASMWWAKP
HHHHHHHHHHHHHHCCEEEECHHHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHCCCC
DAAAHPAP
CCCCCCCC
>Mature Secondary Structure 
TAVLLALCGAAAPLSAHAAYAIAQYGEPKYPPGFRHFDYVNPDAPKGGTLVLANPNRLT
HHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCC
TFDKFNPFTLRGNPAPGLGTIFESLTTGSADEPASAYGLLADDIAIAPDHLSVTFHLNPR
EECCCCCEEEECCCCCCHHHHHHHHHCCCCCCCCHHHCEEHHCEEECCCCEEEEEEECCC
ARFSNGDPVTAADVKYSFDTLKSPQAAPQYAAYFSEIARVVVVDPATVRFEFTRTDRELP
CCCCCCCCCEEEEEEECHHHCCCCCCCHHHHHHHHHCCEEEEECCCEEEEEEECCCCCCC
LIAGAVPVFSRKWGARPDGTRVPFDQLAFQPPIGSGPYLIDHYDSGRTITYRRDPHYWGA
EEECCCHHHHHCCCCCCCCCCCCHHHHCCCCCCCCCCEEEEEECCCCEEEEECCCCCCCC
ALPVRVGTDNFDRIVYKLYGDSVARLEAFKAGEYDVLVEYIARNWVRRDVGKRFDDGELI
EEEEEECCCCHHHHHHHHHCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHH
KREFRQHNGAGMQGFLMNLRRPLFQDVRVREALDLAFDFEWLNRQLFYGGYTRLNSYFAD
HHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCHHHHHHHHCC
TELQARGTPGAGELAILEPLRKQLDPAVFGPMPVQPDTNPPGSLRANLLKARALLAEAGW
CEEEECCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCC
TYRDGALRNAKGEPFRFEILDDSGGGMEPVVTAYQRNLAKLGIEARFRTADFALLQKRLD
EECCCCCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHCCHHEECHHHHHHHHHHHH
AFDYDMTTVRYPGVQVPGAEQATRFASRYADQPGSSNLIGLKSPAVDAILKALLQAQTRE
HHCCCCEEEECCCCCCCCHHHHHHHHHHHCCCCCCCCEEECCCHHHHHHHHHHHHHHHHH
QLLDATHALDRVLMHGYYVVPQWYSTVHRVAYQHTLAYPATLPLYYSADDWVASMWWAKP
HHHHHHHHHHHHHHCCEEEECHHHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHCCCC
DAAAHPAP
CCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; oligopeptides [Periplasm]; H2O [C]

Specific reaction: ATP + oligopeptides [Periplasm] + H2O = ADP + phosphate + oligopeptides [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9163424 [H]