| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
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The map label for this gene is 238026848
Identifier: 238026848
GI number: 238026848
Start: 1320656
End: 1321444
Strand: Direct
Name: 238026848
Synonym: bglu_1g12130
Alternate gene names: NA
Gene position: 1320656-1321444 (Clockwise)
Preceding gene: 238026847
Following gene: 238026850
Centisome position: 33.81
GC content: 60.84
Gene sequence:
>789_bases GTGGATACTGATCGAACCATTGCTGCCACCTGCGAAGCTTCGAGCGAAGAGCGATCCTGGTCGCCCGCGCGTGTCCGACC GTGCGGCTCTCAACGGCATCCTGTTCGTGTTCAAAACGGGAATTCGTTGGAACCACTTGCCGACTCGTCTGGGCTTTGGC TCGGGCGCCACATGCTGGCGGCGATTGAGCGACTGGCAAAAGGCTGGTGTATGGGACCAACTGCACGAGTTGCTTCTCGA CAAGTTGCGTGCGGCCGGCCAAATCGATCTGTCATACGCTGCGGTCGATTCGTCGTCCGTGCGCGCCGTTGGGGCGGGCG AAAAACTGGCCCGAACCCCACCGATCGCGCGCGACCCGGTTCCAAGCACCACGTCCTCGTAGACGCCAACGGCGTTCCTC TCGTTGCGATCCTGACTGGCGCGAACACCAACGACGTCACGCAGTTGCTGCCGCTCGTTGATGCGATTCCACCCATTCGC GGCGTTCGTGGCCGACCGCTTCAGAAGCCCGGCGTCGTCTACGCCGATCGTGGCTACGATTCCACCCGACATCGTCGCGC GTTGCGCGAACGCGGTATCAAGCCCGTGATCGCCAAGCGCCGGACCGAGCATGGCAGTGGTCTGGGCAAGTATCGTTGGG TAGTCGAACGTACGCATTCCTGGCTCCACAATTTCCGTCGCCTACGCACTCGCTTCGAGCGACGTGCCTACATTCACGAA GCATTCCTCAAACTTGGCTGCTCGCTCATCTGTTGGAACATCTTCAGACGAGCTGAGCAGGGTTTTTGA
Upstream 100 bases:
>100_bases CTCCCGAGAGGGGCTGTTTACTTCCTCGGCAAGCTGTTAACCTTGGGCATCAGAACAACGGAAGTCCAAGGATGGAAGCG CCAATCATTGACGACGAACT
Downstream 100 bases:
>100_bases ACTGGCCTCTTAGGGATACCGCTCCACCGCCGTTGAGCCTGTCCTTGTCGAAAGGCGCTCATCGCTCAATCGGCTGCTCA GACCTTGACTGAATTCTTCA
Product: transposase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 262; Mature: 262
Protein sequence:
>262_residues MDTDRTIAATCEASSEERSWSPARVRPCGSQRHPVRVQNGNSLEPLADSSGLWLGRHMLAAIERLAKGWCMGPTARVASR QVACGRPNRSVIRCGRFVVRARRWGGRKTGPNPTDRARPGSKHHVLVDANGVPLVAILTGANTNDVTQLLPLVDAIPPIR GVRGRPLQKPGVVYADRGYDSTRHRRALRERGIKPVIAKRRTEHGSGLGKYRWVVERTHSWLHNFRRLRTRFERRAYIHE AFLKLGCSLICWNIFRRAEQGF
Sequences:
>Translated_262_residues MDTDRTIAATCEASSEERSWSPARVRPCGSQRHPVRVQNGNSLEPLADSSGLWLGRHMLAAIERLAKGWCMGPTARVASR QVACGRPNRSVIRCGRFVVRARRWGGRKTGPNPTDRARPGSKHHVLVDANGVPLVAILTGANTNDVTQLLPLVDAIPPIR GVRGRPLQKPGVVYADRGYDSTRHRRALRERGIKPVIAKRRTEHGSGLGKYRWVVERTHSWLHNFRRLRTRFERRAYIHE AFLKLGCSLICWNIFRRAEQGF >Mature_262_residues MDTDRTIAATCEASSEERSWSPARVRPCGSQRHPVRVQNGNSLEPLADSSGLWLGRHMLAAIERLAKGWCMGPTARVASR QVACGRPNRSVIRCGRFVVRARRWGGRKTGPNPTDRARPGSKHHVLVDANGVPLVAILTGANTNDVTQLLPLVDAIPPIR GVRGRPLQKPGVVYADRGYDSTRHRRALRERGIKPVIAKRRTEHGSGLGKYRWVVERTHSWLHNFRRLRTRFERRAYIHE AFLKLGCSLICWNIFRRAEQGF
Specific function: Involved in the transposition of the insertion sequence [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the transposase 11 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002559 [H]
Pfam domain/function: PF01609 Transposase_11 [H]
EC number: NA
Molecular weight: Translated: 29557; Mature: 29557
Theoretical pI: Translated: 11.98; Mature: 11.98
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.7 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 2.7 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDTDRTIAATCEASSEERSWSPARVRPCGSQRHPVRVQNGNSLEPLADSSGLWLGRHMLA CCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCHHHHHHHH AIERLAKGWCMGPTARVASRQVACGRPNRSVIRCGRFVVRARRWGGRKTGPNPTDRARPG HHHHHHHCCCCCCHHHHHHCHHCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC SKHHVLVDANGVPLVAILTGANTNDVTQLLPLVDAIPPIRGVRGRPLQKPGVVYADRGYD CCCEEEEECCCCEEEEEEECCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEECCCCC STRHRRALRERGIKPVIAKRRTEHGSGLGKYRWVVERTHSWLHNFRRLRTRFERRAYIHE HHHHHHHHHHCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AFLKLGCSLICWNIFRRAEQGF HHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MDTDRTIAATCEASSEERSWSPARVRPCGSQRHPVRVQNGNSLEPLADSSGLWLGRHMLA CCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCHHHHHHHH AIERLAKGWCMGPTARVASRQVACGRPNRSVIRCGRFVVRARRWGGRKTGPNPTDRARPG HHHHHHHCCCCCCHHHHHHCHHCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC SKHHVLVDANGVPLVAILTGANTNDVTQLLPLVDAIPPIRGVRGRPLQKPGVVYADRGYD CCCEEEEECCCCEEEEEEECCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEECCCCC STRHRRALRERGIKPVIAKRRTEHGSGLGKYRWVVERTHSWLHNFRRLRTRFERRAYIHE HHHHHHHHHHCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AFLKLGCSLICWNIFRRAEQGF HHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 1650732 [H]