| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
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The map label for this gene is 238026847
Identifier: 238026847
GI number: 238026847
Start: 1318870
End: 1320426
Strand: Direct
Name: 238026847
Synonym: bglu_1g12100
Alternate gene names: NA
Gene position: 1318870-1320426 (Clockwise)
Preceding gene: 238026846
Following gene: 238026848
Centisome position: 33.76
GC content: 65.0
Gene sequence:
>1557_bases ATGCCGAACAGCCCCGTCATGCCGAGTGTTGAGCAATACCAGGCACTGCTCGCCGAACGCGATGCGCTGCGCGGTGAGCT TCGGCTCGTGACGGCTCAGCGCGATCTGGCCGAAGAGAAACTGCGGGCCTACAAGCACGAACTGTTCGGCGCCTCGAGCG AGGCGCGCCATGCCGACCAGCTCGGCCTGTTCAACGAAGCCGAGGCGCTGGCGACGACTGCCGACGCGCCCGCGCGCGAG GATATGCCCGGTACATCGGTCGCGGCCCACACGCGAGGCAAGCGCGGGCGCAAACCACTCGATCCGAATCTGCCGCGCGA GGTCGTGCGGCACGAGCTGCCCGAGTCCGAACGGTTCTGCGCCCATGACGGCCAGGCCCTCGTCGAGATCGGCGTGGAAA CGAGCGAACAGCTCGACGTGATTCCCGAGCAAGTGCGCGTCGTTCAGCACCAGCGGGTCAAGTACGCGTGCCCATGCTGC GATCTCGGCATCAAGGTCACGCTGGCGCCGACGCGCATCATTCCGCGCGGGCTGCTCACGGAATCCGCGCTGGCGTGGAT CATCACTGGCAAGTACCAGTACGGCATGCCGCTGTATCGTCAGGCCACACTGCTGCGTCGCTTCGGCGGTGACATCTCGT CGAATACGCTGGCCGCCAGCGTGGTGCGGGTAGGTCTGGCCACGCAGCCGGTGATCAACCTGATGCGCGACGCGCTGCTC GAATCGAACTTGATCTACGGCGACGAAACCACGTTCCAGGTGCTGAAGGAACCAGGACGAAGGCCGCAGACGAAGAGTTA CCTGTGGGCGCAGGTCAACGGCTCGGGGCCGCCCGTGCGGATGTTCTCCTACTCGCCCGGGCGCGGTGCTCAACATGCGC AGAAGCTGTATGCCGGTGTACAGCCCGGCACTGCGCTGATGACGGATGGCTACGAGCTCTATAACGGCATCGCCCACGAT CACCAACTCGTGCATCTCGGATGCTGGGCACACGTGCGCCGCGGCTTCATCAAGGCCGAGGAGTCGGTGCCGAAGGCGGC ACGCCCACCGGATCTGCTGGCCACACGCTTCGTGGCACTGATCGGCAAGCTGTTCGCGGCCGAGGCGCGCAGCGCGAAGT GGGAGTCTGAACGCCGGCAGCGATTACGCGCCCGCTACAGCGCCCGCGTGCTCACCCTCATCGAGCGCATGCTGATCGAG CATCTGCCGGGCGTCGTGCCGTCGAGTTTGCTCGGCAAGGCATTGCAGTACATGAACGGACAGTGGCCCAAGCTGGTCCG CTACGTCGAGAACGGCAACTGGCCGATCTCGAACAACCCTTGCGAGAATGCGATCCGACCGTTCGTCGTCGGCCGCAAGG GCTGGCTGTTCTCTGATACGGTCGCCGGTGCGCAGGCCAGTGCCAACCTGTACTCCCTCGTCGAGACGTGCAAGGCGAAC GGCATCGAGCCGTATCGCTATCTGGTCTGGCTGTTCACCAGGTTGCCGCTCGCTGCAACCGCCGACGACTACGCCGATCT CATGCCTTGGAGAATGTCTGCTGGCCTCAACCGCTGA
Upstream 100 bases:
>100_bases CTGCTCGACGGCATCGACCTGGCCGTGATCCAGAAGCATCCCCAGCGATATTACGCGCGGATGAGCTGAACACCACGCAG GTGGCGTGGTCTAATTGGCC
Downstream 100 bases:
>100_bases GGGGCGTCGTTAAAAGACCGCGTACTTTCAAAAGCCGTCATCCACGAATCAAATGATGGGCGCAACTGGTGGCTGTCATC ACGCCCGGGAGATGGTCACT
Product: transposase and inactivated derivatives
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 518; Mature: 517
Protein sequence:
>518_residues MPNSPVMPSVEQYQALLAERDALRGELRLVTAQRDLAEEKLRAYKHELFGASSEARHADQLGLFNEAEALATTADAPARE DMPGTSVAAHTRGKRGRKPLDPNLPREVVRHELPESERFCAHDGQALVEIGVETSEQLDVIPEQVRVVQHQRVKYACPCC DLGIKVTLAPTRIIPRGLLTESALAWIITGKYQYGMPLYRQATLLRRFGGDISSNTLAASVVRVGLATQPVINLMRDALL ESNLIYGDETTFQVLKEPGRRPQTKSYLWAQVNGSGPPVRMFSYSPGRGAQHAQKLYAGVQPGTALMTDGYELYNGIAHD HQLVHLGCWAHVRRGFIKAEESVPKAARPPDLLATRFVALIGKLFAAEARSAKWESERRQRLRARYSARVLTLIERMLIE HLPGVVPSSLLGKALQYMNGQWPKLVRYVENGNWPISNNPCENAIRPFVVGRKGWLFSDTVAGAQASANLYSLVETCKAN GIEPYRYLVWLFTRLPLAATADDYADLMPWRMSAGLNR
Sequences:
>Translated_518_residues MPNSPVMPSVEQYQALLAERDALRGELRLVTAQRDLAEEKLRAYKHELFGASSEARHADQLGLFNEAEALATTADAPARE DMPGTSVAAHTRGKRGRKPLDPNLPREVVRHELPESERFCAHDGQALVEIGVETSEQLDVIPEQVRVVQHQRVKYACPCC DLGIKVTLAPTRIIPRGLLTESALAWIITGKYQYGMPLYRQATLLRRFGGDISSNTLAASVVRVGLATQPVINLMRDALL ESNLIYGDETTFQVLKEPGRRPQTKSYLWAQVNGSGPPVRMFSYSPGRGAQHAQKLYAGVQPGTALMTDGYELYNGIAHD HQLVHLGCWAHVRRGFIKAEESVPKAARPPDLLATRFVALIGKLFAAEARSAKWESERRQRLRARYSARVLTLIERMLIE HLPGVVPSSLLGKALQYMNGQWPKLVRYVENGNWPISNNPCENAIRPFVVGRKGWLFSDTVAGAQASANLYSLVETCKAN GIEPYRYLVWLFTRLPLAATADDYADLMPWRMSAGLNR >Mature_517_residues PNSPVMPSVEQYQALLAERDALRGELRLVTAQRDLAEEKLRAYKHELFGASSEARHADQLGLFNEAEALATTADAPARED MPGTSVAAHTRGKRGRKPLDPNLPREVVRHELPESERFCAHDGQALVEIGVETSEQLDVIPEQVRVVQHQRVKYACPCCD LGIKVTLAPTRIIPRGLLTESALAWIITGKYQYGMPLYRQATLLRRFGGDISSNTLAASVVRVGLATQPVINLMRDALLE SNLIYGDETTFQVLKEPGRRPQTKSYLWAQVNGSGPPVRMFSYSPGRGAQHAQKLYAGVQPGTALMTDGYELYNGIAHDH QLVHLGCWAHVRRGFIKAEESVPKAARPPDLLATRFVALIGKLFAAEARSAKWESERRQRLRARYSARVLTLIERMLIEH LPGVVPSSLLGKALQYMNGQWPKLVRYVENGNWPISNNPCENAIRPFVVGRKGWLFSDTVAGAQASANLYSLVETCKANG IEPYRYLVWLFTRLPLAATADDYADLMPWRMSAGLNR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the transposase 25 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004291 [H]
Pfam domain/function: PF03050 Transposase_25 [H]
EC number: NA
Molecular weight: Translated: 57669; Mature: 57538
Theoretical pI: Translated: 9.30; Mature: 9.30
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPNSPVMPSVEQYQALLAERDALRGELRLVTAQRDLAEEKLRAYKHELFGASSEARHADQ CCCCCCCCCHHHHHHHHHHHHHHCCCEEEEEHHHHHHHHHHHHHHHHHHCCCCHHHHHHH LGLFNEAEALATTADAPAREDMPGTSVAAHTRGKRGRKPLDPNLPREVVRHELPESERFC HCCCCHHHHHHHCCCCCCCCCCCCCCEEHHCCCCCCCCCCCCCCCHHHHHHHCCCCCCHH AHDGQALVEIGVETSEQLDVIPEQVRVVQHQRVKYACPCCDLGIKVTLAPTRIIPRGLLT HCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCHHHCCHHHHH ESALAWIITGKYQYGMPLYRQATLLRRFGGDISSNTLAASVVRVGLATQPVINLMRDALL HHHEEEEEECCCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHH ESNLIYGDETTFQVLKEPGRRPQTKSYLWAQVNGSGPPVRMFSYSPGRGAQHAQKLYAGV HCCCEECCCHHHHHHHCCCCCCCCCCEEEEEECCCCCCEEEEECCCCCCHHHHHHHHHCC QPGTALMTDGYELYNGIAHDHQLVHLGCWAHVRRGFIKAEESVPKAARPPDLLATRFVAL CCCCEEEECCHHHHHCCCCCCEEEEEHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHH IGKLFAAEARSAKWESERRQRLRARYSARVLTLIERMLIEHLPGVVPSSLLGKALQYMNG HHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCC QWPKLVRYVENGNWPISNNPCENAIRPFVVGRKGWLFSDTVAGAQASANLYSLVETCKAN CHHHHHHHHHCCCCCCCCCCHHHCCCCEEECCCCCEECCHHCCCHHHHHHHHHHHHHHCC GIEPYRYLVWLFTRLPLAATADDYADLMPWRMSAGLNR CCCHHHHHHHHHHHCCCCCCCCHHHHHCCHHHHCCCCC >Mature Secondary Structure PNSPVMPSVEQYQALLAERDALRGELRLVTAQRDLAEEKLRAYKHELFGASSEARHADQ CCCCCCCCHHHHHHHHHHHHHHCCCEEEEEHHHHHHHHHHHHHHHHHHCCCCHHHHHHH LGLFNEAEALATTADAPAREDMPGTSVAAHTRGKRGRKPLDPNLPREVVRHELPESERFC HCCCCHHHHHHHCCCCCCCCCCCCCCEEHHCCCCCCCCCCCCCCCHHHHHHHCCCCCCHH AHDGQALVEIGVETSEQLDVIPEQVRVVQHQRVKYACPCCDLGIKVTLAPTRIIPRGLLT HCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCHHHCCHHHHH ESALAWIITGKYQYGMPLYRQATLLRRFGGDISSNTLAASVVRVGLATQPVINLMRDALL HHHEEEEEECCCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHH ESNLIYGDETTFQVLKEPGRRPQTKSYLWAQVNGSGPPVRMFSYSPGRGAQHAQKLYAGV HCCCEECCCHHHHHHHCCCCCCCCCCEEEEEECCCCCCEEEEECCCCCCHHHHHHHHHCC QPGTALMTDGYELYNGIAHDHQLVHLGCWAHVRRGFIKAEESVPKAARPPDLLATRFVAL CCCCEEEECCHHHHHCCCCCCEEEEEHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHH IGKLFAAEARSAKWESERRQRLRARYSARVLTLIERMLIEHLPGVVPSSLLGKALQYMNG HHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCC QWPKLVRYVENGNWPISNNPCENAIRPFVVGRKGWLFSDTVAGAQASANLYSLVETCKAN CHHHHHHHHHCCCCCCCCCCHHHCCCCEEECCCCCEECCHHCCCHHHHHHHHHHHHHHCC GIEPYRYLVWLFTRLPLAATADDYADLMPWRMSAGLNR CCCHHHHHHHHHHHCCCCCCCCHHHHHCCHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9163424 [H]