| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
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The map label for this gene is 238026846
Identifier: 238026846
GI number: 238026846
Start: 1318488
End: 1318838
Strand: Direct
Name: 238026846
Synonym: bglu_1g12090
Alternate gene names: NA
Gene position: 1318488-1318838 (Clockwise)
Preceding gene: 238026845
Following gene: 238026847
Centisome position: 33.75
GC content: 61.25
Gene sequence:
>351_bases GTGTTCCGGTTCGACGAAGGGCTGAAGGTCTACCTGCATCGCGATCCGGTCGACTTCCGCATGGGCATCAACGGGCTGTC GATCCTGGTCGAACAGGCGATGCGCCTGAACTCAATGACCTCGGCGCTGTTCGTCTTCGGCAACCGCCGTCGTGATCGAG TCAAGATCCTCGGCTGGGGCGGCAACGGTTTCTGGTTACTGCTCAAGCGACTCGAAGCCGACCGCTTCGTCTGGCCGAAC GGTGGCGACACGATCACGATCAGCACCGAGCAGTTGCACTGGCTGCTCGACGGCATCGACCTGGCCGTGATCCAGAAGCA TCCCCAGCGATATTACGCGCGGATGAGCTGA
Upstream 100 bases:
>100_bases CCTCGCTGAAGGTGCACTTACCAAACGGCGTTTCCTTGGAGCTGAGCCAGGCGAACTTCGATGAACTGACGATGCTCGTC CAGATGCTCGGGAGGCTGCC
Downstream 100 bases:
>100_bases ACACCACGCAGGTGGCGTGGTCTAATTGGCCATGCCGAACAGCCCCGTCATGCCGAGTGTTGAGCAATACCAGGCACTGC TCGCCGAACGCGATGCGCTG
Product: IS66 Orf2 family protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 116; Mature: 116
Protein sequence:
>116_residues MFRFDEGLKVYLHRDPVDFRMGINGLSILVEQAMRLNSMTSALFVFGNRRRDRVKILGWGGNGFWLLLKRLEADRFVWPN GGDTITISTEQLHWLLDGIDLAVIQKHPQRYYARMS
Sequences:
>Translated_116_residues MFRFDEGLKVYLHRDPVDFRMGINGLSILVEQAMRLNSMTSALFVFGNRRRDRVKILGWGGNGFWLLLKRLEADRFVWPN GGDTITISTEQLHWLLDGIDLAVIQKHPQRYYARMS >Mature_116_residues MFRFDEGLKVYLHRDPVDFRMGINGLSILVEQAMRLNSMTSALFVFGNRRRDRVKILGWGGNGFWLLLKRLEADRFVWPN GGDTITISTEQLHWLLDGIDLAVIQKHPQRYYARMS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the transposase 34 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008878 [H]
Pfam domain/function: PF05717 Transposase_34 [H]
EC number: NA
Molecular weight: Translated: 13555; Mature: 13555
Theoretical pI: Translated: 10.34; Mature: 10.34
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.3 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.3 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFRFDEGLKVYLHRDPVDFRMGINGLSILVEQAMRLNSMTSALFVFGNRRRDRVKILGWG CCEECCCCEEEEECCCCEEEECCCHHHHHHHHHHHHHHHHHEEEEECCCCCCEEEEEEEC GNGFWLLLKRLEADRFVWPNGGDTITISTEQLHWLLDGIDLAVIQKHPQRYYARMS CCCCEEHEEHHCCCCEECCCCCCEEEEEHHHEEEECCCCEEEEEECCCHHHHCCCC >Mature Secondary Structure MFRFDEGLKVYLHRDPVDFRMGINGLSILVEQAMRLNSMTSALFVFGNRRRDRVKILGWG CCEECCCCEEEEECCCCEEEECCCHHHHHHHHHHHHHHHHHEEEEECCCCCCEEEEEEEC GNGFWLLLKRLEADRFVWPNGGDTITISTEQLHWLLDGIDLAVIQKHPQRYYARMS CCCCEEHEEHHCCCCEECCCCCCEEEEEHHHEEEECCCCEEEEEECCCHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9163424 [H]