| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
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The map label for this gene is 238026810
Identifier: 238026810
GI number: 238026810
Start: 1282850
End: 1283446
Strand: Direct
Name: 238026810
Synonym: bglu_1g11690
Alternate gene names: NA
Gene position: 1282850-1283446 (Clockwise)
Preceding gene: 238026809
Following gene: 238026811
Centisome position: 32.84
GC content: 75.54
Gene sequence:
>597_bases ATGACGACCCGGTTCGATCGTGAAGGGCTGCATCAGCTGCTGTACCAGGCGCGCGAAACCAGCTTGCGCGCGGCGGCCGT CTACGAGGCGGCGCTGGCCTGCGCCGCGCGCGACGAGCTTGCCGACGAGTGGCGCGCGCACCGCGACGCGGCGCGGCGCC GGGCGCAGGTGTTCGGCACGGCGTTCGACGCGCTCGGGCTCGACGCGGACGCCACCTCGCACGGCCGCACGGCCGCCGCC GCGCTCGGCAAGTCGCTGCTCGAGGTGATCGCCTATGCGGCGCAGGGCGACGACCGCGCCGCGGCCCTGCGCGTGGCGGC CGAGTGCGTGCTGCTGATCGAGACCAAGGACCAGTTGAACCGCACGCTGCTCGGGATCGCGGCCGAGCGCATCACCGGGC CGGTGGCGCAGGTGCTGAAGGACCTGGTGGAGGCCATCGAGGCCGACGGCGAGCCGCGCGCGCTGCATGCGCGCGGCTGG TCGCGCGAACTGTGGCTCGACGCGCTCGGGCTGGCCGCCGTGCTGCCGCCGCCCGAGGAGGTGGTGCCGGGGCCGGTGCG CGGCGAACTCGGCGAACGGGGCGGGCTGACGCACTGA
Upstream 100 bases:
>100_bases GGCAACTGAGGCGCGGGCTTGGCGCGTGGCCGCGCCGCCGCCCGTTTCAGGCCGGCGGGAACGCCGGCATGCCAATGCCG AACAGGAGGGAGGGTGCACG
Downstream 100 bases:
>100_bases ACGGCGCGCGCGGCGGTGGCGACTGCGTCGGCGAGCCGCGCAGCCGCCGCCGTTTGCGGCGGCTCGGCCGCTGCCGGACA AAAAGAGAGCGCCCCTGAAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 198; Mature: 197
Protein sequence:
>198_residues MTTRFDREGLHQLLYQARETSLRAAAVYEAALACAARDELADEWRAHRDAARRRAQVFGTAFDALGLDADATSHGRTAAA ALGKSLLEVIAYAAQGDDRAAALRVAAECVLLIETKDQLNRTLLGIAAERITGPVAQVLKDLVEAIEADGEPRALHARGW SRELWLDALGLAAVLPPPEEVVPGPVRGELGERGGLTH
Sequences:
>Translated_198_residues MTTRFDREGLHQLLYQARETSLRAAAVYEAALACAARDELADEWRAHRDAARRRAQVFGTAFDALGLDADATSHGRTAAA ALGKSLLEVIAYAAQGDDRAAALRVAAECVLLIETKDQLNRTLLGIAAERITGPVAQVLKDLVEAIEADGEPRALHARGW SRELWLDALGLAAVLPPPEEVVPGPVRGELGERGGLTH >Mature_197_residues TTRFDREGLHQLLYQARETSLRAAAVYEAALACAARDELADEWRAHRDAARRRAQVFGTAFDALGLDADATSHGRTAAAA LGKSLLEVIAYAAQGDDRAAALRVAAECVLLIETKDQLNRTLLGIAAERITGPVAQVLKDLVEAIEADGEPRALHARGWS RELWLDALGLAAVLPPPEEVVPGPVRGELGERGGLTH
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21219; Mature: 21088
Theoretical pI: Translated: 5.13; Mature: 5.13
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 0.5 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 1.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTRFDREGLHQLLYQARETSLRAAAVYEAALACAARDELADEWRAHRDAARRRAQVFGT CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AFDALGLDADATSHGRTAAAALGKSLLEVIAYAAQGDDRAAALRVAAECVLLIETKDQLN HHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHEEECHHHHH RTLLGIAAERITGPVAQVLKDLVEAIEADGEPRALHARGWSRELWLDALGLAAVLPPPEE HHHHHHHHHHHCHHHHHHHHHHHHHHHCCCCCCEEECCCCCHHHHHHHHHHHHCCCCCHH VVPGPVRGELGERGGLTH HCCCCCCCCCCCCCCCCC >Mature Secondary Structure TTRFDREGLHQLLYQARETSLRAAAVYEAALACAARDELADEWRAHRDAARRRAQVFGT CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AFDALGLDADATSHGRTAAAALGKSLLEVIAYAAQGDDRAAALRVAAECVLLIETKDQLN HHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHEEECHHHHH RTLLGIAAERITGPVAQVLKDLVEAIEADGEPRALHARGWSRELWLDALGLAAVLPPPEE HHHHHHHHHHHCHHHHHHHHHHHHHHHCCCCCCEEECCCCCHHHHHHHHHHHHCCCCCHH VVPGPVRGELGERGGLTH HCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA