Definition Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence.
Accession NC_012724
Length 3,906,507

Click here to switch to the map view.

The map label for this gene is 238026810

Identifier: 238026810

GI number: 238026810

Start: 1282850

End: 1283446

Strand: Direct

Name: 238026810

Synonym: bglu_1g11690

Alternate gene names: NA

Gene position: 1282850-1283446 (Clockwise)

Preceding gene: 238026809

Following gene: 238026811

Centisome position: 32.84

GC content: 75.54

Gene sequence:

>597_bases
ATGACGACCCGGTTCGATCGTGAAGGGCTGCATCAGCTGCTGTACCAGGCGCGCGAAACCAGCTTGCGCGCGGCGGCCGT
CTACGAGGCGGCGCTGGCCTGCGCCGCGCGCGACGAGCTTGCCGACGAGTGGCGCGCGCACCGCGACGCGGCGCGGCGCC
GGGCGCAGGTGTTCGGCACGGCGTTCGACGCGCTCGGGCTCGACGCGGACGCCACCTCGCACGGCCGCACGGCCGCCGCC
GCGCTCGGCAAGTCGCTGCTCGAGGTGATCGCCTATGCGGCGCAGGGCGACGACCGCGCCGCGGCCCTGCGCGTGGCGGC
CGAGTGCGTGCTGCTGATCGAGACCAAGGACCAGTTGAACCGCACGCTGCTCGGGATCGCGGCCGAGCGCATCACCGGGC
CGGTGGCGCAGGTGCTGAAGGACCTGGTGGAGGCCATCGAGGCCGACGGCGAGCCGCGCGCGCTGCATGCGCGCGGCTGG
TCGCGCGAACTGTGGCTCGACGCGCTCGGGCTGGCCGCCGTGCTGCCGCCGCCCGAGGAGGTGGTGCCGGGGCCGGTGCG
CGGCGAACTCGGCGAACGGGGCGGGCTGACGCACTGA

Upstream 100 bases:

>100_bases
GGCAACTGAGGCGCGGGCTTGGCGCGTGGCCGCGCCGCCGCCCGTTTCAGGCCGGCGGGAACGCCGGCATGCCAATGCCG
AACAGGAGGGAGGGTGCACG

Downstream 100 bases:

>100_bases
ACGGCGCGCGCGGCGGTGGCGACTGCGTCGGCGAGCCGCGCAGCCGCCGCCGTTTGCGGCGGCTCGGCCGCTGCCGGACA
AAAAGAGAGCGCCCCTGAAG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 198; Mature: 197

Protein sequence:

>198_residues
MTTRFDREGLHQLLYQARETSLRAAAVYEAALACAARDELADEWRAHRDAARRRAQVFGTAFDALGLDADATSHGRTAAA
ALGKSLLEVIAYAAQGDDRAAALRVAAECVLLIETKDQLNRTLLGIAAERITGPVAQVLKDLVEAIEADGEPRALHARGW
SRELWLDALGLAAVLPPPEEVVPGPVRGELGERGGLTH

Sequences:

>Translated_198_residues
MTTRFDREGLHQLLYQARETSLRAAAVYEAALACAARDELADEWRAHRDAARRRAQVFGTAFDALGLDADATSHGRTAAA
ALGKSLLEVIAYAAQGDDRAAALRVAAECVLLIETKDQLNRTLLGIAAERITGPVAQVLKDLVEAIEADGEPRALHARGW
SRELWLDALGLAAVLPPPEEVVPGPVRGELGERGGLTH
>Mature_197_residues
TTRFDREGLHQLLYQARETSLRAAAVYEAALACAARDELADEWRAHRDAARRRAQVFGTAFDALGLDADATSHGRTAAAA
LGKSLLEVIAYAAQGDDRAAALRVAAECVLLIETKDQLNRTLLGIAAERITGPVAQVLKDLVEAIEADGEPRALHARGWS
RELWLDALGLAAVLPPPEEVVPGPVRGELGERGGLTH

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21219; Mature: 21088

Theoretical pI: Translated: 5.13; Mature: 5.13

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
0.5 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
1.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTRFDREGLHQLLYQARETSLRAAAVYEAALACAARDELADEWRAHRDAARRRAQVFGT
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AFDALGLDADATSHGRTAAAALGKSLLEVIAYAAQGDDRAAALRVAAECVLLIETKDQLN
HHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHEEECHHHHH
RTLLGIAAERITGPVAQVLKDLVEAIEADGEPRALHARGWSRELWLDALGLAAVLPPPEE
HHHHHHHHHHHCHHHHHHHHHHHHHHHCCCCCCEEECCCCCHHHHHHHHHHHHCCCCCHH
VVPGPVRGELGERGGLTH
HCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
TTRFDREGLHQLLYQARETSLRAAAVYEAALACAARDELADEWRAHRDAARRRAQVFGT
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AFDALGLDADATSHGRTAAAALGKSLLEVIAYAAQGDDRAAALRVAAECVLLIETKDQLN
HHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHEEECHHHHH
RTLLGIAAERITGPVAQVLKDLVEAIEADGEPRALHARGWSRELWLDALGLAAVLPPPEE
HHHHHHHHHHHCHHHHHHHHHHHHHHHCCCCCCEEECCCCCHHHHHHHHHHHHCCCCCHH
VVPGPVRGELGERGGLTH
HCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA