Definition Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence.
Accession NC_012724
Length 3,906,507

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The map label for this gene is 238026811

Identifier: 238026811

GI number: 238026811

Start: 1284770

End: 1285669

Strand: Direct

Name: 238026811

Synonym: bglu_1g11700

Alternate gene names: NA

Gene position: 1284770-1285669 (Clockwise)

Preceding gene: 238026810

Following gene: 238026812

Centisome position: 32.89

GC content: 68.22

Gene sequence:

>900_bases
ATGATTCGATGCCGTGCCGTTCCCGTTTCCCCGCGCCGCCTGGGCCTGATGCGCCGCGCGGTCGTTCCGTCGCGGCTGAC
CGTCCTGACGGTGTGCTGCGCGGCCGCCGTGACGGCCCGCGCGCAGACGCCGGGCCCGCTCAGCGAGTGGCAGTACTCGG
CCGGCGTGCCGCTCGAGAGCCTGTTCAATCCGCACCCGCCCGACAAGTGGGACGTGCGGGTGGGCGTGGCCTCCACGTTC
CGGCCGCGGTACGACGGCTCCGACCAGTACCGCGCGATGGCCGGCCCGAGCATCGACGTGCGCTATCGCGACCTGCTGTT
CCTCTCGACCGGCGAGGGGCTGGGCGTGAATTTCCTGCGCGGCCGGAACTGGCGCGCGACGCTGTCGGTCGGCTACGATC
TCGGGCGCCGTTCGGCCGACGATCTCGGCCACCTGAACGGCCTCGACAACATCAATCCGGCACCGAAGATCAAGCTGTCG
GCGGACTACGTGCTGTCCAAGCGCTTTCCGCTGGTGCTGCGCGGCGACGTGCAGCGCTACATCGGCGGCGCGAACGGCTG
GGTGGCCGACTTCGCCGCCTACATGCCGCTGCCGGGCAGCTCGGAGCGCTTTTTCTGGTTCGCCGGCCCGAACGTCACGT
TCGCCGACTCGCGCTACATGAACAGCTGGTTCGGGGTAAACCAGGGGGAATCGGCGCGCTCGGGAATTCCGGCGTATTCT
GCGAAGGCGGGCCTGAGATCCTATGGCGGCGGCATCACCATGGTGTGGTTCTTCCGCAAGCACTGGTTCCTCACGGCCGA
CGGCGCGATCCAGCAGCTGGTGGGCAGCGCGCGTCACAGCCCGATCACGCAGAGTTCGGCGAACGCCACGTTCGATCTGT
CGATCAATTACCAGTTCTAG

Upstream 100 bases:

>100_bases
CACGCGCGCCGGCCGGCGCCCGGCACATGGCTGGCGCAGGGCTCGCGGGCGCGGTTGGGGACGCTCTCAGCAGAACGTAC
AACACGAAGAGGACAAGCTG

Downstream 100 bases:

>100_bases
TTCTGGCATCCATGCCCGCCGCACGGCCCGGCCGTGCGGCGAGAGAGGCACCCCGTACAGGAGGAGACGATGGAGCAGGC
ACGGAATCAAAACCCGGTGA

Product: outer membrane protein V

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 299; Mature: 299

Protein sequence:

>299_residues
MIRCRAVPVSPRRLGLMRRAVVPSRLTVLTVCCAAAVTARAQTPGPLSEWQYSAGVPLESLFNPHPPDKWDVRVGVASTF
RPRYDGSDQYRAMAGPSIDVRYRDLLFLSTGEGLGVNFLRGRNWRATLSVGYDLGRRSADDLGHLNGLDNINPAPKIKLS
ADYVLSKRFPLVLRGDVQRYIGGANGWVADFAAYMPLPGSSERFFWFAGPNVTFADSRYMNSWFGVNQGESARSGIPAYS
AKAGLRSYGGGITMVWFFRKHWFLTADGAIQQLVGSARHSPITQSSANATFDLSINYQF

Sequences:

>Translated_299_residues
MIRCRAVPVSPRRLGLMRRAVVPSRLTVLTVCCAAAVTARAQTPGPLSEWQYSAGVPLESLFNPHPPDKWDVRVGVASTF
RPRYDGSDQYRAMAGPSIDVRYRDLLFLSTGEGLGVNFLRGRNWRATLSVGYDLGRRSADDLGHLNGLDNINPAPKIKLS
ADYVLSKRFPLVLRGDVQRYIGGANGWVADFAAYMPLPGSSERFFWFAGPNVTFADSRYMNSWFGVNQGESARSGIPAYS
AKAGLRSYGGGITMVWFFRKHWFLTADGAIQQLVGSARHSPITQSSANATFDLSINYQF
>Mature_299_residues
MIRCRAVPVSPRRLGLMRRAVVPSRLTVLTVCCAAAVTARAQTPGPLSEWQYSAGVPLESLFNPHPPDKWDVRVGVASTF
RPRYDGSDQYRAMAGPSIDVRYRDLLFLSTGEGLGVNFLRGRNWRATLSVGYDLGRRSADDLGHLNGLDNINPAPKIKLS
ADYVLSKRFPLVLRGDVQRYIGGANGWVADFAAYMPLPGSSERFFWFAGPNVTFADSRYMNSWFGVNQGESARSGIPAYS
AKAGLRSYGGGITMVWFFRKHWFLTADGAIQQLVGSARHSPITQSSANATFDLSINYQF

Specific function: Unknown

COG id: COG3713

COG function: function code M; Outer membrane protein V

Gene ontology:

Cell location: Cell outer membrane; Peripheral membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the mipA/ompV family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010583 [H]

Pfam domain/function: PF06629 MipA [H]

EC number: NA

Molecular weight: Translated: 32982; Mature: 32982

Theoretical pI: Translated: 10.31; Mature: 10.31

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIRCRAVPVSPRRLGLMRRAVVPSRLTVLTVCCAAAVTARAQTPGPLSEWQYSAGVPLES
CEEEEECCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCHHHCCCCCCCCHHH
LFNPHPPDKWDVRVGVASTFRPRYDGSDQYRAMAGPSIDVRYRDLLFLSTGEGLGVNFLR
HCCCCCCCCEEEEEEEHHCCCCCCCCCCCEEEECCCCEEEEEEEEEEEECCCCCCEEEEE
GRNWRATLSVGYDLGRRSADDLGHLNGLDNINPAPKIKLSADYVLSKRFPLVLRGDVQRY
CCCEEEEEEECCCCCCCCHHHHHHCCCCCCCCCCCEEEEECCEEECCCCCEEEECCHHHH
IGGANGWVADFAAYMPLPGSSERFFWFAGPNVTFADSRYMNSWFGVNQGESARSGIPAYS
HCCCCCHHHHHHHHCCCCCCCCEEEEEECCCEEECCCHHHHHHCCCCCCCCHHCCCCCHH
AKAGLRSYGGGITMVWFFRKHWFLTADGAIQQLVGSARHSPITQSSANATFDLSINYQF
HHHHHHHHCCCEEEEEEEEEEEEEEECHHHHHHHHHHCCCCCCCCCCCEEEEEEEEECC
>Mature Secondary Structure
MIRCRAVPVSPRRLGLMRRAVVPSRLTVLTVCCAAAVTARAQTPGPLSEWQYSAGVPLES
CEEEEECCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCHHHCCCCCCCCHHH
LFNPHPPDKWDVRVGVASTFRPRYDGSDQYRAMAGPSIDVRYRDLLFLSTGEGLGVNFLR
HCCCCCCCCEEEEEEEHHCCCCCCCCCCCEEEECCCCEEEEEEEEEEEECCCCCCEEEEE
GRNWRATLSVGYDLGRRSADDLGHLNGLDNINPAPKIKLSADYVLSKRFPLVLRGDVQRY
CCCEEEEEEECCCCCCCCHHHHHHCCCCCCCCCCCEEEEECCEEECCCCCEEEECCHHHH
IGGANGWVADFAAYMPLPGSSERFFWFAGPNVTFADSRYMNSWFGVNQGESARSGIPAYS
HCCCCCHHHHHHHHCCCCCCCCEEEEEECCCEEECCCHHHHHHCCCCCCCCHHCCCCCHH
AKAGLRSYGGGITMVWFFRKHWFLTADGAIQQLVGSARHSPITQSSANATFDLSINYQF
HHHHHHHHCCCEEEEEEEEEEEEEEECHHHHHHHHHHCCCCCCCCCCCEEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11259647 [H]