Definition Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence.
Accession NC_012724
Length 3,906,507

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The map label for this gene is 238026799

Identifier: 238026799

GI number: 238026799

Start: 1271679

End: 1272377

Strand: Reverse

Name: 238026799

Synonym: bglu_1g11570

Alternate gene names: NA

Gene position: 1272377-1271679 (Counterclockwise)

Preceding gene: 238026800

Following gene: 238026798

Centisome position: 32.57

GC content: 75.11

Gene sequence:

>699_bases
ATGCCCTGTCGAATCGCACTCCTGATGTTTCCCGGCGTCCAGGCCCTCGACCTCGTCGGCCCGCACGACGTATTCGCGGC
ACTGCCCGACACCACGCTCCACCGCGTCGCGAAAAGCACCGCGCCGCTCGCCGCCGCCCACGGCCTGGTGATGACGCCCG
ACACCGATTTCGACGCCTGCCCCGACGTCGACGTGCTGTGCGTGCCAGGCGGCTCCGGCGTCGACGAACTGCTGCTCGAC
GACGCGACGCTCGCGTTCGTGCGGCGAGCGGCCGCCTCGGCGCGCTACCTCGGTTCGGTCTGCACCGGCGCGCTGGTACT
CGGCGCCGCAGGCCTGCTGCGTGGCCGCCGCGCGACCACCCATTGGGCCTCGCTGCCGCTGCTCGCGGCGTTCGGCGCCA
TGCCGGTGCAGGAGCGCGTGGTGCGCGACGGACGGCTCGTCACGGGCGGCGGGGTCACGGCCGGCATCGACTTCGCGCTG
ACCATCGCCCGCGAGCTGCACGGCGAGGCCGTCGCGCAGGCCGCGCAGCTGGCGATCGAATACGCGCCCGCGCCACCGTT
CGGTGCGGGCTGCCCCGCGACGGCGCCGTGCGCAGTGGTCGATGCCGAGCGGGCCCGCTACGCGCCGATCATCGCGGCAC
GCGAGGCACGGGTCGCGCAGGCGGCCGCGCGGCTCGCGGCCGACCATCCGGCGCGCTGA

Upstream 100 bases:

>100_bases
CGGCTGGCGCCGACGAGCGCCGTGCCGAATGAGCCGCTGAGCCGCCCCGCCCGCCCCCACCGCGAAGGCACCCGCCCCCG
CCATCACCCCGAGCCCCGTC

Downstream 100 bases:

>100_bases
GGGGCGGCAGCCGCCATTCCCGCTTGGCCACCGTTGCGCGGCACGCGCGGATTATCCGGAAATCGGCAATGGGGCGGCTA
AAGCAATCGATCAGGCCAAC

Product: DJ-1/PfpI family protein

Products: NA

Alternate protein names: ORF1 [H]

Number of amino acids: Translated: 232; Mature: 231

Protein sequence:

>232_residues
MPCRIALLMFPGVQALDLVGPHDVFAALPDTTLHRVAKSTAPLAAAHGLVMTPDTDFDACPDVDVLCVPGGSGVDELLLD
DATLAFVRRAAASARYLGSVCTGALVLGAAGLLRGRRATTHWASLPLLAAFGAMPVQERVVRDGRLVTGGGVTAGIDFAL
TIARELHGEAVAQAAQLAIEYAPAPPFGAGCPATAPCAVVDAERARYAPIIAAREARVAQAAARLAADHPAR

Sequences:

>Translated_232_residues
MPCRIALLMFPGVQALDLVGPHDVFAALPDTTLHRVAKSTAPLAAAHGLVMTPDTDFDACPDVDVLCVPGGSGVDELLLD
DATLAFVRRAAASARYLGSVCTGALVLGAAGLLRGRRATTHWASLPLLAAFGAMPVQERVVRDGRLVTGGGVTAGIDFAL
TIARELHGEAVAQAAQLAIEYAPAPPFGAGCPATAPCAVVDAERARYAPIIAAREARVAQAAARLAADHPAR
>Mature_231_residues
PCRIALLMFPGVQALDLVGPHDVFAALPDTTLHRVAKSTAPLAAAHGLVMTPDTDFDACPDVDVLCVPGGSGVDELLLDD
ATLAFVRRAAASARYLGSVCTGALVLGAAGLLRGRRATTHWASLPLLAAFGAMPVQERVVRDGRLVTGGGVTAGIDFALT
IARELHGEAVAQAAQLAIEYAPAPPFGAGCPATAPCAVVDAERARYAPIIAAREARVAQAAARLAADHPAR

Specific function: Unknown

COG id: COG0693

COG function: function code R; Putative intracellular protease/amidase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase C56 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002818 [H]

Pfam domain/function: PF01965 DJ-1_PfpI [H]

EC number: NA

Molecular weight: Translated: 23771; Mature: 23639

Theoretical pI: Translated: 6.50; Mature: 6.50

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.6 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
2.6 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPCRIALLMFPGVQALDLVGPHDVFAALPDTTLHRVAKSTAPLAAAHGLVMTPDTDFDAC
CCCEEEEEECCCCHHHHCCCCHHHHHHCCCHHHHHHHHHCCCHHHHCCEEECCCCCCCCC
PDVDVLCVPGGSGVDELLLDDATLAFVRRAAASARYLGSVCTGALVLGAAGLLRGRRATT
CCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCH
HWASLPLLAAFGAMPVQERVVRDGRLVTGGGVTAGIDFALTIARELHGEAVAQAAQLAIE
HHHHHHHHHHHCCCCHHHHHHHCCEEEECCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHE
YAPAPPFGAGCPATAPCAVVDAERARYAPIIAAREARVAQAAARLAADHPAR
ECCCCCCCCCCCCCCCEEEEECCHHHCCCHHHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure 
PCRIALLMFPGVQALDLVGPHDVFAALPDTTLHRVAKSTAPLAAAHGLVMTPDTDFDAC
CCEEEEEECCCCHHHHCCCCHHHHHHCCCHHHHHHHHHCCCHHHHCCEEECCCCCCCCC
PDVDVLCVPGGSGVDELLLDDATLAFVRRAAASARYLGSVCTGALVLGAAGLLRGRRATT
CCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCH
HWASLPLLAAFGAMPVQERVVRDGRLVTGGGVTAGIDFALTIARELHGEAVAQAAQLAIE
HHHHHHHHHHHCCCCHHHHHHHCCEEEECCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHE
YAPAPPFGAGCPATAPCAVVDAERARYAPIIAAREARVAQAAARLAADHPAR
ECCCCCCCCCCCCCCCEEEEECCHHHCCCHHHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8157602 [H]