| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
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The map label for this gene is 238026798
Identifier: 238026798
GI number: 238026798
Start: 1269464
End: 1271239
Strand: Reverse
Name: 238026798
Synonym: bglu_1g11560
Alternate gene names: NA
Gene position: 1271239-1269464 (Counterclockwise)
Preceding gene: 238026799
Following gene: 238026797
Centisome position: 32.54
GC content: 65.99
Gene sequence:
>1776_bases ATGAAAGCAAAAACACCGGGTCTGGGTTTCGGATCGCGCCGCGCGATCCGGCAAATCGGAGGGGTCGTGCTGTCGTTGTC GGCGCTGACATTGAGCGCCTGCGGCGGAGACGGATCGGATACCAACACGGTATCGCTCGCTTCGCTGTCCAACCGTCCGC TCACCGACACGACCGCCTACTCCACGAGCGCCGGCGCGAGCCTGACAGCCTCGCAGGCCACCGAATCGGCGGCCGTCATG CACCGTCAGTGGAAAAGCGGCAGCACCACCGTCAACTACACCTCCACCACCGGCCACCTGATCGCGACCGATCCGAACGG CACGCCGGAGGCGACCATGTCCTACGTCGCCTACACCGCGCCGAGCCAGGATGGCACGCCGCGCCCCGTCACCTTCTTCT ACAACGGCGGGCCCGGCTCGTCGTCGGTCTGGCTGCGGCTCGGCTCGTTCGCGCCGACGCGCGTGGCCACGCCCGACCCG CTGCTGACGAACTGGCCGAACTTCCCGCTCGTGAGCAACGACGAGAGCCTGATCGGCTCCACCGACATGGTGTTCATCGA TCCGCCCGGCACCGGCTTCTCCGAGGCGATCGCGCCGAACACCAACAAGACGTTCTGGGGCGCCGATTCCGACGTGCGCG TGATGCGCGACTTCATCCGCCGCTACGTGACGGTGAACGGCCGCTCGAACTCGCCGCTCTACCTCTACGGCGAATCGTAT GGCACGCCGCGCACCAACATGCTCGCGCTGTCGCTCGAATCGGCGGGCGTGAACCTGACCGGGATCGTGCTGCAGTCGTC GATCCTCAACTACTTCGCGGACCCCGGCGAGACCTATGCGATCACCAACGGCGACTCGAGCAGCAACGCGCTCGAGCTGA AATACGCGACCGACGGCATGATCGGCTACTTCCTCGGTTACGCGCAGGTGGCCGCCTACTTCAACCAGGTGTCGCCCGCT CCGACCAACCTCGGCACCTTCGCGCTGCAGATCCAGAACTTCGTGACCGCGCAGTACTCGCAGCTGGCGCAGTACGCACC GACCTTCTTCTTCGCCGGCTCGCCGCTGGTGCCTAACCCGACGTTCCCGGACAACACGACGATCTCGAACTGGTCGACCC AGACCAACATGTCGATGGCCTCGCTGAGCGCCTACTTCGGCAACGACTACTACGGCACCTCGCTCGTGCCCGGCTCGACC ATCGGCCGCTATGACGGGCGCGTGATCCTGCCGAACAGCGATCCGCGACTCGCCCAGGATTCCGATCCGTCGGACATCCT GATCACGCAGCCGTTCACCAACACGCTGGCCACCCAGCTGCCCAACGAGCTCGGCTACTCGGCGCCGAACGCGACCTACG CCACGCTCAACGACAGCATCATCAGCGCGTGGGACTTCAGCCACGCGGGGCAGGTGGTGCCGGACACGATTCCGGATCTG CTCGCCGCGCTGCGCCTGAACCCGAAGCTGAAGGTGCTGTCGGCGAACGGCTATCACGATCTCGCCACGCCGTTCTTCCT GACCGAGAACCAGCTCGCGCGGCTGCAGACGGTGCCGGGCCTGCAGGTGAACCTGCAGATGACGTTCTACCAGGGCGGCC ACATGATCTATCTGGACGACGTCGCGCGCCCGCAGCTGCGCTCGGATCTGGTCTCGTTCTTCAAGAACCAGTCGATCCCC AACGCGCTGTCGCTCGCGCAGCTGCCGGCGCCTTGGTCTGACGAGAGCCCGGCCGGTACGCCGACGCTGAAGGCCGCGGC AATCGCCGCCCGTTGA
Upstream 100 bases:
>100_bases AAGCAATTCAATAAATAAATGAGAGCAATCTGGATTCACCGCGCCGGATTGCATTGCCGTTCTGATTGATTTAAATAAAT CGAAAGGAAAAGGAATACCA
Downstream 100 bases:
>100_bases CCCCCTGGAACGCGCGGCGCCGCCTGCGGGCGGCCCGCGTTCGCGAACCCAACACGAGTCAAGCCATGATCCAATCGCCA TCATCGACCTCGCGCCTCGC
Product: Serine carboxypeptidase family protein
Products: NA
Alternate protein names: Serine Carboxypeptidase Family Protein; Carboxypeptidase-Related Protein; Serine Carboxypeptidase; Carboxypeptidase C; Serine-Type Carboxypeptidase Family Protein; S10 Family Peptidase; Carboxypeptidase; S10 Family Carboxypeptidase; Carboxypeptidase-Like Protein; Serine Carboxypeptidase Superfamily; Peptidase S
Number of amino acids: Translated: 591; Mature: 591
Protein sequence:
>591_residues MKAKTPGLGFGSRRAIRQIGGVVLSLSALTLSACGGDGSDTNTVSLASLSNRPLTDTTAYSTSAGASLTASQATESAAVM HRQWKSGSTTVNYTSTTGHLIATDPNGTPEATMSYVAYTAPSQDGTPRPVTFFYNGGPGSSSVWLRLGSFAPTRVATPDP LLTNWPNFPLVSNDESLIGSTDMVFIDPPGTGFSEAIAPNTNKTFWGADSDVRVMRDFIRRYVTVNGRSNSPLYLYGESY GTPRTNMLALSLESAGVNLTGIVLQSSILNYFADPGETYAITNGDSSSNALELKYATDGMIGYFLGYAQVAAYFNQVSPA PTNLGTFALQIQNFVTAQYSQLAQYAPTFFFAGSPLVPNPTFPDNTTISNWSTQTNMSMASLSAYFGNDYYGTSLVPGST IGRYDGRVILPNSDPRLAQDSDPSDILITQPFTNTLATQLPNELGYSAPNATYATLNDSIISAWDFSHAGQVVPDTIPDL LAALRLNPKLKVLSANGYHDLATPFFLTENQLARLQTVPGLQVNLQMTFYQGGHMIYLDDVARPQLRSDLVSFFKNQSIP NALSLAQLPAPWSDESPAGTPTLKAAAIAAR
Sequences:
>Translated_591_residues MKAKTPGLGFGSRRAIRQIGGVVLSLSALTLSACGGDGSDTNTVSLASLSNRPLTDTTAYSTSAGASLTASQATESAAVM HRQWKSGSTTVNYTSTTGHLIATDPNGTPEATMSYVAYTAPSQDGTPRPVTFFYNGGPGSSSVWLRLGSFAPTRVATPDP LLTNWPNFPLVSNDESLIGSTDMVFIDPPGTGFSEAIAPNTNKTFWGADSDVRVMRDFIRRYVTVNGRSNSPLYLYGESY GTPRTNMLALSLESAGVNLTGIVLQSSILNYFADPGETYAITNGDSSSNALELKYATDGMIGYFLGYAQVAAYFNQVSPA PTNLGTFALQIQNFVTAQYSQLAQYAPTFFFAGSPLVPNPTFPDNTTISNWSTQTNMSMASLSAYFGNDYYGTSLVPGST IGRYDGRVILPNSDPRLAQDSDPSDILITQPFTNTLATQLPNELGYSAPNATYATLNDSIISAWDFSHAGQVVPDTIPDL LAALRLNPKLKVLSANGYHDLATPFFLTENQLARLQTVPGLQVNLQMTFYQGGHMIYLDDVARPQLRSDLVSFFKNQSIP NALSLAQLPAPWSDESPAGTPTLKAAAIAAR >Mature_591_residues MKAKTPGLGFGSRRAIRQIGGVVLSLSALTLSACGGDGSDTNTVSLASLSNRPLTDTTAYSTSAGASLTASQATESAAVM HRQWKSGSTTVNYTSTTGHLIATDPNGTPEATMSYVAYTAPSQDGTPRPVTFFYNGGPGSSSVWLRLGSFAPTRVATPDP LLTNWPNFPLVSNDESLIGSTDMVFIDPPGTGFSEAIAPNTNKTFWGADSDVRVMRDFIRRYVTVNGRSNSPLYLYGESY GTPRTNMLALSLESAGVNLTGIVLQSSILNYFADPGETYAITNGDSSSNALELKYATDGMIGYFLGYAQVAAYFNQVSPA PTNLGTFALQIQNFVTAQYSQLAQYAPTFFFAGSPLVPNPTFPDNTTISNWSTQTNMSMASLSAYFGNDYYGTSLVPGST IGRYDGRVILPNSDPRLAQDSDPSDILITQPFTNTLATQLPNELGYSAPNATYATLNDSIISAWDFSHAGQVVPDTIPDL LAALRLNPKLKVLSANGYHDLATPFFLTENQLARLQTVPGLQVNLQMTFYQGGHMIYLDDVARPQLRSDLVSFFKNQSIP NALSLAQLPAPWSDESPAGTPTLKAAAIAAR
Specific function: Unknown
COG id: COG2939
COG function: function code E; Carboxypeptidase C (cathepsin A)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 63147; Mature: 63147
Theoretical pI: Translated: 4.74; Mature: 4.74
Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS00678 WD_REPEATS_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKAKTPGLGFGSRRAIRQIGGVVLSLSALTLSACGGDGSDTNTVSLASLSNRPLTDTTAY CCCCCCCCCCCHHHHHHHHHHHEEEEEHHEEEECCCCCCCCCEEEEEECCCCCCCCCCCC STSAGASLTASQATESAAVMHRQWKSGSTTVNYTSTTGHLIATDPNGTPEATMSYVAYTA CCCCCCEEEHHHHHHHHHHHHHHCCCCCCEEEEECCCCEEEEECCCCCCCCEEEEEEEEC PSQDGTPRPVTFFYNGGPGSSSVWLRLGSFAPTRVATPDPLLTNWPNFPLVSNDESLIGS CCCCCCCCCEEEEECCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCC TDMVFIDPPGTGFSEAIAPNTNKTFWGADSDVRVMRDFIRRYVTVNGRSNSPLYLYGESY CCEEEECCCCCCHHHHCCCCCCCEEECCCCCHHHHHHHHHHEEEECCCCCCCEEEEECCC GTPRTNMLALSLESAGVNLTGIVLQSSILNYFADPGETYAITNGDSSSNALELKYATDGM CCCCCEEEEEEECCCCCCEEHHHHHHHHHHHHCCCCCEEEEECCCCCCCEEEEEEECCCH IGYFLGYAQVAAYFNQVSPAPTNLGTFALQIQNFVTAQYSQLAQYAPTFFFAGSPLVPNP HHHHHHHHHHHHHHHHCCCCCCCCCEEEEEHHHHHHHHHHHHHHHCCEEEECCCCCCCCC TFPDNTTISNWSTQTNMSMASLSAYFGNDYYGTSLVPGSTIGRYDGRVILPNSDPRLAQD CCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCC SDPSDILITQPFTNTLATQLPNELGYSAPNATYATLNDSIISAWDFSHAGQVVPDTIPDL CCCCCEEEECCCHHHHHHHCCHHHCCCCCCCEEEEECCCEEEEECCCCCCCCCCCHHHHH LAALRLNPKLKVLSANGYHDLATPFFLTENQLARLQTVPGLQVNLQMTFYQGGHMIYLDD HHHHCCCCCEEEEECCCCCCCCCCEEECCCHHHHHHCCCCCEEEEEEEEEECCEEEEECC VARPQLRSDLVSFFKNQSIPNALSLAQLPAPWSDESPAGTPTLKAAAIAAR CCCHHHHHHHHHHHHCCCCCCHHHHHHCCCCCCCCCCCCCCCEEEEEEECC >Mature Secondary Structure MKAKTPGLGFGSRRAIRQIGGVVLSLSALTLSACGGDGSDTNTVSLASLSNRPLTDTTAY CCCCCCCCCCCHHHHHHHHHHHEEEEEHHEEEECCCCCCCCCEEEEEECCCCCCCCCCCC STSAGASLTASQATESAAVMHRQWKSGSTTVNYTSTTGHLIATDPNGTPEATMSYVAYTA CCCCCCEEEHHHHHHHHHHHHHHCCCCCCEEEEECCCCEEEEECCCCCCCCEEEEEEEEC PSQDGTPRPVTFFYNGGPGSSSVWLRLGSFAPTRVATPDPLLTNWPNFPLVSNDESLIGS CCCCCCCCCEEEEECCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCC TDMVFIDPPGTGFSEAIAPNTNKTFWGADSDVRVMRDFIRRYVTVNGRSNSPLYLYGESY CCEEEECCCCCCHHHHCCCCCCCEEECCCCCHHHHHHHHHHEEEECCCCCCCEEEEECCC GTPRTNMLALSLESAGVNLTGIVLQSSILNYFADPGETYAITNGDSSSNALELKYATDGM CCCCCEEEEEEECCCCCCEEHHHHHHHHHHHHCCCCCEEEEECCCCCCCEEEEEEECCCH IGYFLGYAQVAAYFNQVSPAPTNLGTFALQIQNFVTAQYSQLAQYAPTFFFAGSPLVPNP HHHHHHHHHHHHHHHHCCCCCCCCCEEEEEHHHHHHHHHHHHHHHCCEEEECCCCCCCCC TFPDNTTISNWSTQTNMSMASLSAYFGNDYYGTSLVPGSTIGRYDGRVILPNSDPRLAQD CCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCC SDPSDILITQPFTNTLATQLPNELGYSAPNATYATLNDSIISAWDFSHAGQVVPDTIPDL CCCCCEEEECCCHHHHHHHCCHHHCCCCCCCEEEEECCCEEEEECCCCCCCCCCCHHHHH LAALRLNPKLKVLSANGYHDLATPFFLTENQLARLQTVPGLQVNLQMTFYQGGHMIYLDD HHHHCCCCCEEEEECCCCCCCCCCEEECCCHHHHHHCCCCCEEEEEEEEEECCEEEEECC VARPQLRSDLVSFFKNQSIPNALSLAQLPAPWSDESPAGTPTLKAAAIAAR CCCHHHHHHHHHHHHCCCCCCHHHHHHCCCCCCCCCCCCCCCEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA