Definition Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence.
Accession NC_012724
Length 3,906,507

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The map label for this gene is 238026800

Identifier: 238026800

GI number: 238026800

Start: 1272446

End: 1272742

Strand: Reverse

Name: 238026800

Synonym: bglu_1g11580

Alternate gene names: NA

Gene position: 1272742-1272446 (Counterclockwise)

Preceding gene: 238026802

Following gene: 238026799

Centisome position: 32.58

GC content: 73.74

Gene sequence:

>297_bases
ATGCTGGAACTACGCCCGATCTGCGAACACTGCGCGACACCGCTGCCGCCCGAGGCGCCGCAGGCGCGCATCTGCAGCTA
CGAATGCACGTTCTGCGCCGCCTGCGTCGAGCAGGTGCTGTACCACGTCTGCCCCAACTGCGGCGGCGGCTTCGCGCCGC
GGCCGATTCGCCCCGCGCAGCGCCTGGGCCGCCATCCGCCCGCGACGCAGGCGATCCATCGTCCGGTGGACCCGATCGCG
CACGCGGCGTTCGCGGCCCGCTGCGCGGCTGGCGCCGACGAGCGCCGTGCCGAATGA

Upstream 100 bases:

>100_bases
TCCATTCCTGTCCGGAATCGGCATTGTCGCCGATCACATCGCAAACTACGATGGCATGAAATCACCAGTGCGGTGAGCGC
ACTGCCCCTGGGAGCCACCC

Downstream 100 bases:

>100_bases
GCCGCTGAGCCGCCCCGCCCGCCCCCACCGCGAAGGCACCCGCCCCCGCCATCACCCCGAGCCCCGTCATGCCCTGTCGA
ATCGCACTCCTGATGTTTCC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 98; Mature: 98

Protein sequence:

>98_residues
MLELRPICEHCATPLPPEAPQARICSYECTFCAACVEQVLYHVCPNCGGGFAPRPIRPAQRLGRHPPATQAIHRPVDPIA
HAAFAARCAAGADERRAE

Sequences:

>Translated_98_residues
MLELRPICEHCATPLPPEAPQARICSYECTFCAACVEQVLYHVCPNCGGGFAPRPIRPAQRLGRHPPATQAIHRPVDPIA
HAAFAARCAAGADERRAE
>Mature_98_residues
MLELRPICEHCATPLPPEAPQARICSYECTFCAACVEQVLYHVCPNCGGGFAPRPIRPAQRLGRHPPATQAIHRPVDPIA
HAAFAARCAAGADERRAE

Specific function: Unknown

COG id: COG3813

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010696
- InterPro:   IPR013083 [H]

Pfam domain/function: PF06906 DUF1272 [H]

EC number: NA

Molecular weight: Translated: 10599; Mature: 10599

Theoretical pI: Translated: 7.68; Mature: 7.68

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

9.2 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
10.2 %Cys+Met (Translated Protein)
9.2 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
10.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLELRPICEHCATPLPPEAPQARICSYECTFCAACVEQVLYHVCPNCGGGFAPRPIRPAQ
CCCCCHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHH
RLGRHPPATQAIHRPVDPIAHAAFAARCAAGADERRAE
HHCCCCCHHHHHHCCCCHHHHHHHHHHHHCCCHHCCCC
>Mature Secondary Structure
MLELRPICEHCATPLPPEAPQARICSYECTFCAACVEQVLYHVCPNCGGGFAPRPIRPAQ
CCCCCHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHH
RLGRHPPATQAIHRPVDPIAHAAFAARCAAGADERRAE
HHCCCCCHHHHHHCCCCHHHHHHHHHHHHCCCHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8121412; 11481430 [H]