| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
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The map label for this gene is 238026800
Identifier: 238026800
GI number: 238026800
Start: 1272446
End: 1272742
Strand: Reverse
Name: 238026800
Synonym: bglu_1g11580
Alternate gene names: NA
Gene position: 1272742-1272446 (Counterclockwise)
Preceding gene: 238026802
Following gene: 238026799
Centisome position: 32.58
GC content: 73.74
Gene sequence:
>297_bases ATGCTGGAACTACGCCCGATCTGCGAACACTGCGCGACACCGCTGCCGCCCGAGGCGCCGCAGGCGCGCATCTGCAGCTA CGAATGCACGTTCTGCGCCGCCTGCGTCGAGCAGGTGCTGTACCACGTCTGCCCCAACTGCGGCGGCGGCTTCGCGCCGC GGCCGATTCGCCCCGCGCAGCGCCTGGGCCGCCATCCGCCCGCGACGCAGGCGATCCATCGTCCGGTGGACCCGATCGCG CACGCGGCGTTCGCGGCCCGCTGCGCGGCTGGCGCCGACGAGCGCCGTGCCGAATGA
Upstream 100 bases:
>100_bases TCCATTCCTGTCCGGAATCGGCATTGTCGCCGATCACATCGCAAACTACGATGGCATGAAATCACCAGTGCGGTGAGCGC ACTGCCCCTGGGAGCCACCC
Downstream 100 bases:
>100_bases GCCGCTGAGCCGCCCCGCCCGCCCCCACCGCGAAGGCACCCGCCCCCGCCATCACCCCGAGCCCCGTCATGCCCTGTCGA ATCGCACTCCTGATGTTTCC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 98; Mature: 98
Protein sequence:
>98_residues MLELRPICEHCATPLPPEAPQARICSYECTFCAACVEQVLYHVCPNCGGGFAPRPIRPAQRLGRHPPATQAIHRPVDPIA HAAFAARCAAGADERRAE
Sequences:
>Translated_98_residues MLELRPICEHCATPLPPEAPQARICSYECTFCAACVEQVLYHVCPNCGGGFAPRPIRPAQRLGRHPPATQAIHRPVDPIA HAAFAARCAAGADERRAE >Mature_98_residues MLELRPICEHCATPLPPEAPQARICSYECTFCAACVEQVLYHVCPNCGGGFAPRPIRPAQRLGRHPPATQAIHRPVDPIA HAAFAARCAAGADERRAE
Specific function: Unknown
COG id: COG3813
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010696 - InterPro: IPR013083 [H]
Pfam domain/function: PF06906 DUF1272 [H]
EC number: NA
Molecular weight: Translated: 10599; Mature: 10599
Theoretical pI: Translated: 7.68; Mature: 7.68
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
9.2 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 10.2 %Cys+Met (Translated Protein) 9.2 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 10.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLELRPICEHCATPLPPEAPQARICSYECTFCAACVEQVLYHVCPNCGGGFAPRPIRPAQ CCCCCHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHH RLGRHPPATQAIHRPVDPIAHAAFAARCAAGADERRAE HHCCCCCHHHHHHCCCCHHHHHHHHHHHHCCCHHCCCC >Mature Secondary Structure MLELRPICEHCATPLPPEAPQARICSYECTFCAACVEQVLYHVCPNCGGGFAPRPIRPAQ CCCCCHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHH RLGRHPPATQAIHRPVDPIAHAAFAARCAAGADERRAE HHCCCCCHHHHHHCCCCHHHHHHHHHHHHCCCHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8121412; 11481430 [H]