Definition Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence.
Accession NC_012724
Length 3,906,507

Click here to switch to the map view.

The map label for this gene is 238026714

Identifier: 238026714

GI number: 238026714

Start: 1171720

End: 1172271

Strand: Direct

Name: 238026714

Synonym: bglu_1g10710

Alternate gene names: NA

Gene position: 1171720-1172271 (Clockwise)

Preceding gene: 238026711

Following gene: 238026715

Centisome position: 29.99

GC content: 68.12

Gene sequence:

>552_bases
ATGAGCAAGGTTCCCGACGATTACATCAACGACGTGATCGCGCGCGAGGGCGGCTACGTCAACAATCCAGACGACCGCGG
CGGCGAGACGAACTTCGGCATCACGGCGGCCACGGCGCGCGCGTTCGGCTACCAGGGCGCGATGCGGGACCTGCCGCGCG
AGCTGGCCGCGCAGATCTATCGGCAGAACTACTGGACGGCGCCGCATTTCGACCAGATCGCCGCGCTCGACGAGACGCTG
GCGGCCAAGCTGCTCGACATCGGCGTCAACATGGGGCCGGCCACCGGGGTGAAGTTCATGCAGCGCGCGCTGAACGTGCT
GAACGTGCCGAACCAGCCGGCCGTGACGGTCGACGGCCAGGTCGGGCCGGCCACCGTGGCGCTGCTGCGCGCCTTCTATG
CGCAGCGCGGCAGCGCGGGCCAGCCGGTGCTGAAGGGCATGGTCGCCGCGCAGCAGTCGGTGCGCTACATCGAGCTGGCG
GAGCAGAACGCCAGCCAGAAGACCTTCGAGTACGGTTGGCAGCTGAATCGGGCATTGGGAGGAACGGCATGA

Upstream 100 bases:

>100_bases
CGCGTTCGGCCGGACGGGAAACATCAACGATCCGCTACAGCGAGGCCACCATGAATCATTACGTCATGCTTAGGAAGTCA
ATCGGATTCGGAGGGAAGCT

Downstream 100 bases:

>100_bases
GCACCTGGGGCGATGTGGCAGCGGAAGTCTCGAAGGTCGCGCCGATCCTCGGCAACGCGGTGCCCGGCGTGGGCACGCTG
GTCGGCTCCGGGGTGGGGCT

Product: peptidoglycan domain-containing protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 183; Mature: 182

Protein sequence:

>183_residues
MSKVPDDYINDVIAREGGYVNNPDDRGGETNFGITAATARAFGYQGAMRDLPRELAAQIYRQNYWTAPHFDQIAALDETL
AAKLLDIGVNMGPATGVKFMQRALNVLNVPNQPAVTVDGQVGPATVALLRAFYAQRGSAGQPVLKGMVAAQQSVRYIELA
EQNASQKTFEYGWQLNRALGGTA

Sequences:

>Translated_183_residues
MSKVPDDYINDVIAREGGYVNNPDDRGGETNFGITAATARAFGYQGAMRDLPRELAAQIYRQNYWTAPHFDQIAALDETL
AAKLLDIGVNMGPATGVKFMQRALNVLNVPNQPAVTVDGQVGPATVALLRAFYAQRGSAGQPVLKGMVAAQQSVRYIELA
EQNASQKTFEYGWQLNRALGGTA
>Mature_182_residues
SKVPDDYINDVIAREGGYVNNPDDRGGETNFGITAATARAFGYQGAMRDLPRELAAQIYRQNYWTAPHFDQIAALDETLA
AKLLDIGVNMGPATGVKFMQRALNVLNVPNQPAVTVDGQVGPATVALLRAFYAQRGSAGQPVLKGMVAAQQSVRYIELAE
QNASQKTFEYGWQLNRALGGTA

Specific function: Unknown

COG id: COG3926

COG function: function code R; Putative secretion activating protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19779; Mature: 19647

Theoretical pI: Translated: 5.91; Mature: 5.91

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKVPDDYINDVIAREGGYVNNPDDRGGETNFGITAATARAFGYQGAMRDLPRELAAQIY
CCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
RQNYWTAPHFDQIAALDETLAAKLLDIGVNMGPATGVKFMQRALNVLNVPNQPAVTVDGQ
HHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCEEECCC
VGPATVALLRAFYAQRGSAGQPVLKGMVAAQQSVRYIELAEQNASQKTFEYGWQLNRALG
CCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCC
GTA
CCC
>Mature Secondary Structure 
SKVPDDYINDVIAREGGYVNNPDDRGGETNFGITAATARAFGYQGAMRDLPRELAAQIY
CCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
RQNYWTAPHFDQIAALDETLAAKLLDIGVNMGPATGVKFMQRALNVLNVPNQPAVTVDGQ
HHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCEEECCC
VGPATVALLRAFYAQRGSAGQPVLKGMVAAQQSVRYIELAEQNASQKTFEYGWQLNRALG
CCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCC
GTA
CCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA