| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
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The map label for this gene is 238026714
Identifier: 238026714
GI number: 238026714
Start: 1171720
End: 1172271
Strand: Direct
Name: 238026714
Synonym: bglu_1g10710
Alternate gene names: NA
Gene position: 1171720-1172271 (Clockwise)
Preceding gene: 238026711
Following gene: 238026715
Centisome position: 29.99
GC content: 68.12
Gene sequence:
>552_bases ATGAGCAAGGTTCCCGACGATTACATCAACGACGTGATCGCGCGCGAGGGCGGCTACGTCAACAATCCAGACGACCGCGG CGGCGAGACGAACTTCGGCATCACGGCGGCCACGGCGCGCGCGTTCGGCTACCAGGGCGCGATGCGGGACCTGCCGCGCG AGCTGGCCGCGCAGATCTATCGGCAGAACTACTGGACGGCGCCGCATTTCGACCAGATCGCCGCGCTCGACGAGACGCTG GCGGCCAAGCTGCTCGACATCGGCGTCAACATGGGGCCGGCCACCGGGGTGAAGTTCATGCAGCGCGCGCTGAACGTGCT GAACGTGCCGAACCAGCCGGCCGTGACGGTCGACGGCCAGGTCGGGCCGGCCACCGTGGCGCTGCTGCGCGCCTTCTATG CGCAGCGCGGCAGCGCGGGCCAGCCGGTGCTGAAGGGCATGGTCGCCGCGCAGCAGTCGGTGCGCTACATCGAGCTGGCG GAGCAGAACGCCAGCCAGAAGACCTTCGAGTACGGTTGGCAGCTGAATCGGGCATTGGGAGGAACGGCATGA
Upstream 100 bases:
>100_bases CGCGTTCGGCCGGACGGGAAACATCAACGATCCGCTACAGCGAGGCCACCATGAATCATTACGTCATGCTTAGGAAGTCA ATCGGATTCGGAGGGAAGCT
Downstream 100 bases:
>100_bases GCACCTGGGGCGATGTGGCAGCGGAAGTCTCGAAGGTCGCGCCGATCCTCGGCAACGCGGTGCCCGGCGTGGGCACGCTG GTCGGCTCCGGGGTGGGGCT
Product: peptidoglycan domain-containing protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 183; Mature: 182
Protein sequence:
>183_residues MSKVPDDYINDVIAREGGYVNNPDDRGGETNFGITAATARAFGYQGAMRDLPRELAAQIYRQNYWTAPHFDQIAALDETL AAKLLDIGVNMGPATGVKFMQRALNVLNVPNQPAVTVDGQVGPATVALLRAFYAQRGSAGQPVLKGMVAAQQSVRYIELA EQNASQKTFEYGWQLNRALGGTA
Sequences:
>Translated_183_residues MSKVPDDYINDVIAREGGYVNNPDDRGGETNFGITAATARAFGYQGAMRDLPRELAAQIYRQNYWTAPHFDQIAALDETL AAKLLDIGVNMGPATGVKFMQRALNVLNVPNQPAVTVDGQVGPATVALLRAFYAQRGSAGQPVLKGMVAAQQSVRYIELA EQNASQKTFEYGWQLNRALGGTA >Mature_182_residues SKVPDDYINDVIAREGGYVNNPDDRGGETNFGITAATARAFGYQGAMRDLPRELAAQIYRQNYWTAPHFDQIAALDETLA AKLLDIGVNMGPATGVKFMQRALNVLNVPNQPAVTVDGQVGPATVALLRAFYAQRGSAGQPVLKGMVAAQQSVRYIELAE QNASQKTFEYGWQLNRALGGTA
Specific function: Unknown
COG id: COG3926
COG function: function code R; Putative secretion activating protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19779; Mature: 19647
Theoretical pI: Translated: 5.91; Mature: 5.91
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKVPDDYINDVIAREGGYVNNPDDRGGETNFGITAATARAFGYQGAMRDLPRELAAQIY CCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH RQNYWTAPHFDQIAALDETLAAKLLDIGVNMGPATGVKFMQRALNVLNVPNQPAVTVDGQ HHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCEEECCC VGPATVALLRAFYAQRGSAGQPVLKGMVAAQQSVRYIELAEQNASQKTFEYGWQLNRALG CCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCC GTA CCC >Mature Secondary Structure SKVPDDYINDVIAREGGYVNNPDDRGGETNFGITAATARAFGYQGAMRDLPRELAAQIY CCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH RQNYWTAPHFDQIAALDETLAAKLLDIGVNMGPATGVKFMQRALNVLNVPNQPAVTVDGQ HHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCEEECCC VGPATVALLRAFYAQRGSAGQPVLKGMVAAQQSVRYIELAEQNASQKTFEYGWQLNRALG CCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCC GTA CCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA