| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
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The map label for this gene is 238026715
Identifier: 238026715
GI number: 238026715
Start: 1172268
End: 1172867
Strand: Direct
Name: 238026715
Synonym: bglu_1g10720
Alternate gene names: NA
Gene position: 1172268-1172867 (Clockwise)
Preceding gene: 238026714
Following gene: 238026723
Centisome position: 30.01
GC content: 69.33
Gene sequence:
>600_bases ATGAGCACCTGGGGCGATGTGGCAGCGGAAGTCTCGAAGGTCGCGCCGATCCTCGGCAACGCGGTGCCCGGCGTGGGCAC GCTGGTCGGCTCCGGGGTGGGGCTCGCCGCGTCGGTGATCGCCAAGGCGCTCGGCACCGATCCGTCGCCCGACAGCGTGA TGGGCGCGCTGGTGAACGATCCCGAGGCCGCCGGCAAGCTGAAGCAGGCGGAGATGGATCACGAGCGCGATCTCGCGCAA ATCGCCGCGCAGCGCGAGCAGACCGAACTGTCGGCGCGCACGGCGCTGTACAGCGCCGAGGCCGCCGACCGCGACAGCGC GCGCAAGCTGGCCGCCAAGCAGCCGGGCGACTGGGTGCGCCCAACCATCACGTTCGGGCTGCTGTTCGGCGCGATCGCGA TTCTGGTGTTCGTGTTCCACGGCAATGCGTCGCTCCTGAAGGACGCCACCACCAGCCTGACGGTGGGCACGGTGATCGGC TACTGGTTCAACGAGCTGAAGCAGACGCTGTCGTTCTGGTTCGGCACGACCAGCGACGCGACGGCGACCAATGCCAAGGT CGCGGACTTCGCGGTGTCGCCGGGCGCGACAGGCAAGTAG
Upstream 100 bases:
>100_bases CGCAGCAGTCGGTGCGCTACATCGAGCTGGCGGAGCAGAACGCCAGCCAGAAGACCTTCGAGTACGGTTGGCAGCTGAAT CGGGCATTGGGAGGAACGGC
Downstream 100 bases:
>100_bases CGGGCGGCGCGGGCGGCCGGTGCCGTCGCGCCGTCGCGGCGGACCGGGCTGCGCCGCGGCGGCGCGCATGTCAGCGGCCG CGCGCGCCGGTCTCAGCGGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 199; Mature: 198
Protein sequence:
>199_residues MSTWGDVAAEVSKVAPILGNAVPGVGTLVGSGVGLAASVIAKALGTDPSPDSVMGALVNDPEAAGKLKQAEMDHERDLAQ IAAQREQTELSARTALYSAEAADRDSARKLAAKQPGDWVRPTITFGLLFGAIAILVFVFHGNASLLKDATTSLTVGTVIG YWFNELKQTLSFWFGTTSDATATNAKVADFAVSPGATGK
Sequences:
>Translated_199_residues MSTWGDVAAEVSKVAPILGNAVPGVGTLVGSGVGLAASVIAKALGTDPSPDSVMGALVNDPEAAGKLKQAEMDHERDLAQ IAAQREQTELSARTALYSAEAADRDSARKLAAKQPGDWVRPTITFGLLFGAIAILVFVFHGNASLLKDATTSLTVGTVIG YWFNELKQTLSFWFGTTSDATATNAKVADFAVSPGATGK >Mature_198_residues STWGDVAAEVSKVAPILGNAVPGVGTLVGSGVGLAASVIAKALGTDPSPDSVMGALVNDPEAAGKLKQAEMDHERDLAQI AAQREQTELSARTALYSAEAADRDSARKLAAKQPGDWVRPTITFGLLFGAIAILVFVFHGNASLLKDATTSLTVGTVIGY WFNELKQTLSFWFGTTSDATATNAKVADFAVSPGATGK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20565; Mature: 20434
Theoretical pI: Translated: 4.94; Mature: 4.94
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTWGDVAAEVSKVAPILGNAVPGVGTLVGSGVGLAASVIAKALGTDPSPDSVMGALVND CCCHHHHHHHHHHHHHHHHCCCCCHHHHHHCCHHHHHHHHHHHHCCCCCHHHHHHHHHCC PEAAGKLKQAEMDHERDLAQIAAQREQTELSARTALYSAEAADRDSARKLAAKQPGDWVR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCHH PTITFGLLFGAIAILVFVFHGNASLLKDATTSLTVGTVIGYWFNELKQTLSFWFGTTSDA HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC TATNAKVADFAVSPGATGK CCCCCHHHHEEECCCCCCC >Mature Secondary Structure STWGDVAAEVSKVAPILGNAVPGVGTLVGSGVGLAASVIAKALGTDPSPDSVMGALVND CCHHHHHHHHHHHHHHHHCCCCCHHHHHHCCHHHHHHHHHHHHCCCCCHHHHHHHHHCC PEAAGKLKQAEMDHERDLAQIAAQREQTELSARTALYSAEAADRDSARKLAAKQPGDWVR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCHH PTITFGLLFGAIAILVFVFHGNASLLKDATTSLTVGTVIGYWFNELKQTLSFWFGTTSDA HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC TATNAKVADFAVSPGATGK CCCCCHHHHEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA