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The map label for this gene is echR [H]

Identifier: 238026711

GI number: 238026711

Start: 1168790

End: 1169515

Strand: Direct

Name: echR [H]

Synonym: bglu_1g10680

Alternate gene names: 238026711

Gene position: 1168790-1169515 (Clockwise)

Preceding gene: 238026702

Following gene: 238026714

Centisome position: 29.92

GC content: 63.5

Gene sequence:

>726_bases
ATGACGGGCGGTGAAACCAGCAAGGCGTCGCCGTCGATTCGGCTGGGCGAAGACCCCAGCCTGGCCGTGCTGATCGAGCA
TCTGCCGGCCGAGATCGATTGCCCGTTCGCCTATGTCATGATCGACAAGAATTCGCTGGAGCTTGGATGCTTCCTTTCGA
GTTATCCGATCCGCTTGCAGCAGGAATATCGGCGCCGTGCATTGCACCGCGTCGATCCGGTGGTCCTGCATGCGATCCAG
AGCGTCGCGCCGTTTTCGTGGGCCGAGGCATTCAGGCAGCAGCGCGTGCCCGATCCATCGGAATTCGATGCGCTGCGCCG
CGAATTCGGGCTTCACGACGGCTACGTGTTCACGGTCCACGATCCGTACCAGTACGTGGGCATGCTCAGCTTTTTCAATC
GCGGCGGGCGGCCCGAGTTCCGGGCCGAGATCGAGCGCGTGAAGGGTGCGATGCAGCTCGCGCTGGTGCTGTTTCACAGC
AGGATCAATGCGAAGCCGCCCGACTCCCGGCACCGCGTCGAGTCGCTGACGCTGCGCGAGCGCACCGTTCTCAAATGGGC
CGCCATGGGCAAGTCGTACAGCGAGATCGCCGATATTTGCGGGATTCGCGAGCGCACGGTCAAGTACCACATGGCGAACG
TCGTGCAGAAGCTCGACGTGTCCACCGCCAAGCAGGCCGTGATCGTCGCGTCGAGGCTCGGGCTGGCCGCGTTGAGCGAG
GGCTGA

Upstream 100 bases:

>100_bases
CCCATGGCACGCGCGCCCGGTGCGCGCCGGCCGCGGGCGGGAGCCCATGACGGCGGGCGCCGCCGCGCTCGCGGCCGGCT
TGCCCGCGCGGGAGTAAGAC

Downstream 100 bases:

>100_bases
CGCGGCCGGGCGGGGCGCCGTGCATTCACGCGCAGGCGCCGCCGTCGGGCCGCGCTTGGCGCGGGACGAGTTCGCCGAGC
CCGTAGCGGTCGAGGGCCCG

Product: acylhomoserine lactone dependent transcriptional activator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 241; Mature: 240

Protein sequence:

>241_residues
MTGGETSKASPSIRLGEDPSLAVLIEHLPAEIDCPFAYVMIDKNSLELGCFLSSYPIRLQQEYRRRALHRVDPVVLHAIQ
SVAPFSWAEAFRQQRVPDPSEFDALRREFGLHDGYVFTVHDPYQYVGMLSFFNRGGRPEFRAEIERVKGAMQLALVLFHS
RINAKPPDSRHRVESLTLRERTVLKWAAMGKSYSEIADICGIRERTVKYHMANVVQKLDVSTAKQAVIVASRLGLAALSE
G

Sequences:

>Translated_241_residues
MTGGETSKASPSIRLGEDPSLAVLIEHLPAEIDCPFAYVMIDKNSLELGCFLSSYPIRLQQEYRRRALHRVDPVVLHAIQ
SVAPFSWAEAFRQQRVPDPSEFDALRREFGLHDGYVFTVHDPYQYVGMLSFFNRGGRPEFRAEIERVKGAMQLALVLFHS
RINAKPPDSRHRVESLTLRERTVLKWAAMGKSYSEIADICGIRERTVKYHMANVVQKLDVSTAKQAVIVASRLGLAALSE
G
>Mature_240_residues
TGGETSKASPSIRLGEDPSLAVLIEHLPAEIDCPFAYVMIDKNSLELGCFLSSYPIRLQQEYRRRALHRVDPVVLHAIQS
VAPFSWAEAFRQQRVPDPSEFDALRREFGLHDGYVFTVHDPYQYVGMLSFFNRGGRPEFRAEIERVKGAMQLALVLFHSR
INAKPPDSRHRVESLTLRERTVLKWAAMGKSYSEIADICGIRERTVKYHMANVVQKLDVSTAKQAVIVASRLGLAALSEG

Specific function: Functions as a potential ohlL-responsive transcriptional regulator [H]

COG id: COG2771

COG function: function code K; DNA-binding HTH domain-containing proteins

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH luxR-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016032
- InterPro:   IPR005143
- InterPro:   IPR000792
- InterPro:   IPR011991 [H]

Pfam domain/function: PF03472 Autoind_bind; PF00196 GerE [H]

EC number: NA

Molecular weight: Translated: 27171; Mature: 27039

Theoretical pI: Translated: 8.79; Mature: 8.79

Prosite motif: PS00622 HTH_LUXR_1 ; PS50043 HTH_LUXR_2 ; PS00105 AA_TRANSFER_CLASS_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTGGETSKASPSIRLGEDPSLAVLIEHLPAEIDCPFAYVMIDKNSLELGCFLSSYPIRLQ
CCCCCCCCCCCCEEECCCCCHHHHHHHCCCCCCCCEEEEEEECCCCEEEEECCCCCCHHH
QEYRRRALHRVDPVVLHAIQSVAPFSWAEAFRQQRVPDPSEFDALRREFGLHDGYVFTVH
HHHHHHHHHHCCHHHHHHHHHHCCHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCEEEEEC
DPYQYVGMLSFFNRGGRPEFRAEIERVKGAMQLALVLFHSRINAKPPDSRHRVESLTLRE
CHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHH
RTVLKWAAMGKSYSEIADICGIRERTVKYHMANVVQKLDVSTAKQAVIVASRLGLAALSE
HHHHHHHHHCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCC
G
C
>Mature Secondary Structure 
TGGETSKASPSIRLGEDPSLAVLIEHLPAEIDCPFAYVMIDKNSLELGCFLSSYPIRLQ
CCCCCCCCCCCEEECCCCCHHHHHHHCCCCCCCCEEEEEEECCCCEEEEECCCCCCHHH
QEYRRRALHRVDPVVLHAIQSVAPFSWAEAFRQQRVPDPSEFDALRREFGLHDGYVFTVH
HHHHHHHHHHCCHHHHHHHHHHCCHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCEEEEEC
DPYQYVGMLSFFNRGGRPEFRAEIERVKGAMQLALVLFHSRINAKPPDSRHRVESLTLRE
CHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHH
RTVLKWAAMGKSYSEIADICGIRERTVKYHMANVVQKLDVSTAKQAVIVASRLGLAALSE
HHHHHHHHHCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCC
G
C

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA