| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
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The map label for this gene is hisQ [H]
Identifier: 238026653
GI number: 238026653
Start: 1084857
End: 1085546
Strand: Direct
Name: hisQ [H]
Synonym: bglu_1g10060
Alternate gene names: 238026653
Gene position: 1084857-1085546 (Clockwise)
Preceding gene: 238026652
Following gene: 238026654
Centisome position: 27.77
GC content: 66.52
Gene sequence:
>690_bases GTGTTCCTATACGGATTCGGCCCCCTCATCTGGGCGGGCACCGTGCAGACCATCGAGCTGTCGGTGCTCTCGCTCGCCGC GGCGGTCGCGCTCGGCCTGGCCGGCGCGGTCGCGAAGCTGTCGACTCACCGCGTGCTGCGCGCGCTCGCCACGGCCTACA CCACGCTGATCCGCTCGGTGCCGGACCTGGTGCTGATGCTGCTGCTGTTCTACAGCATCCAGATCTGGCTGAACCAGATC ACCGACCTGCTCGGCTGGGACCAGATCGACATCGACCCGTTCGTGGCCGGCGTGCTGACGCTCGGCTTCATCTACGGCGC CTACTTCACCGAGACGTTTCGCGGCGCGTTCCTGTCGGTGCCGCGCGGCCAGCTCGAGGCGGGCGCGGCCTACGGCATGA GCGGGATGCGCGTGTTTACGCGCATCCTGTTCCCGCAGATGATGCGCTTCGCGCTGCCCGGCATCGGCAACAACTGGCAG GTGCTCGTGAAGGCCACGGCGCTGGTCTCCATCATTGGCCTCGCCGACGTCGTGAAGGCCGCGCAGGACGCGGGCAAGAG CACCTTCAAGATGTTTTTCTTCATCCTCGTCGCGGCGCTGGTCTATCTGGCGATCACGACGCTTTCCAACCTGGTGCTGC GGCAGCTGGAGCGGCGCTACTCGCTCGGCGTGAGGCACGCGGAACTATGA
Upstream 100 bases:
>100_bases GAGCCGGTTTTTTTCGCGAGCCACCATCCGCCGCATCCCCTGGCCGCTTCCCGAGAAGAAGCCGCCGCCCCGACCCGCCA CCGTCCACCCGGAGACACGC
Downstream 100 bases:
>100_bases TCGAGATCCTGCAGGAATTCGGCCGTGCGTTCCTCTACCACGACGGCCAGCGTTTCTCGGGCCTCGTGGTCACGCTGTGG CTGCTGGCGGCGTCGATCGG
Product: histidine ABC transporter permease HisQ
Products: ADP; phosphate; L-histidine [Cytoplasm]; ADP; L-ornithine [Cytoplasm]; L-arginine [Cytoplasm]; L-lysine [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 229; Mature: 229
Protein sequence:
>229_residues MFLYGFGPLIWAGTVQTIELSVLSLAAAVALGLAGAVAKLSTHRVLRALATAYTTLIRSVPDLVLMLLLFYSIQIWLNQI TDLLGWDQIDIDPFVAGVLTLGFIYGAYFTETFRGAFLSVPRGQLEAGAAYGMSGMRVFTRILFPQMMRFALPGIGNNWQ VLVKATALVSIIGLADVVKAAQDAGKSTFKMFFFILVAALVYLAITTLSNLVLRQLERRYSLGVRHAEL
Sequences:
>Translated_229_residues MFLYGFGPLIWAGTVQTIELSVLSLAAAVALGLAGAVAKLSTHRVLRALATAYTTLIRSVPDLVLMLLLFYSIQIWLNQI TDLLGWDQIDIDPFVAGVLTLGFIYGAYFTETFRGAFLSVPRGQLEAGAAYGMSGMRVFTRILFPQMMRFALPGIGNNWQ VLVKATALVSIIGLADVVKAAQDAGKSTFKMFFFILVAALVYLAITTLSNLVLRQLERRYSLGVRHAEL >Mature_229_residues MFLYGFGPLIWAGTVQTIELSVLSLAAAVALGLAGAVAKLSTHRVLRALATAYTTLIRSVPDLVLMLLLFYSIQIWLNQI TDLLGWDQIDIDPFVAGVLTLGFIYGAYFTETFRGAFLSVPRGQLEAGAAYGMSGMRVFTRILFPQMMRFALPGIGNNWQ VLVKATALVSIIGLADVVKAAQDAGKSTFKMFFFILVAALVYLAITTLSNLVLRQLERRYSLGVRHAEL
Specific function: Part of the binding-protein-dependent transport system for histidine; probably responsible for the translocation of the substrate across the membrane [H]
COG id: COG4215
COG function: function code E; ABC-type arginine transport system, permease component
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transmembrane type-1 domain [H]
Homologues:
Organism=Escherichia coli, GI1788646, Length=227, Percent_Identity=60.352422907489, Blast_Score=276, Evalue=6e-76, Organism=Escherichia coli, GI1787087, Length=216, Percent_Identity=34.7222222222222, Blast_Score=133, Evalue=1e-32, Organism=Escherichia coli, GI1787030, Length=215, Percent_Identity=30.6976744186047, Blast_Score=109, Evalue=1e-25, Organism=Escherichia coli, GI1788226, Length=218, Percent_Identity=29.8165137614679, Blast_Score=91, Evalue=5e-20, Organism=Escherichia coli, GI1788645, Length=224, Percent_Identity=29.9107142857143, Blast_Score=90, Evalue=1e-19, Organism=Escherichia coli, GI1786873, Length=212, Percent_Identity=29.7169811320755, Blast_Score=82, Evalue=3e-17, Organism=Escherichia coli, GI1786874, Length=225, Percent_Identity=29.7777777777778, Blast_Score=79, Evalue=2e-16, Organism=Escherichia coli, GI87082239, Length=220, Percent_Identity=26.8181818181818, Blast_Score=71, Evalue=7e-14, Organism=Escherichia coli, GI1787086, Length=219, Percent_Identity=27.3972602739726, Blast_Score=65, Evalue=3e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010065 - InterPro: IPR000515 [H]
Pfam domain/function: PF00528 BPD_transp_1 [H]
EC number: NA
Molecular weight: Translated: 25043; Mature: 25043
Theoretical pI: Translated: 9.96; Mature: 9.96
Prosite motif: PS50928 ABC_TM1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFLYGFGPLIWAGTVQTIELSVLSLAAAVALGLAGAVAKLSTHRVLRALATAYTTLIRSV CCEECCCHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH PDLVLMLLLFYSIQIWLNQITDLLGWDQIDIDPFVAGVLTLGFIYGAYFTETFRGAFLSV HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC PRGQLEAGAAYGMSGMRVFTRILFPQMMRFALPGIGNNWQVLVKATALVSIIGLADVVKA CCCHHHHHHHHCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHH AQDAGKSTFKMFFFILVAALVYLAITTLSNLVLRQLERRYSLGVRHAEL HHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure MFLYGFGPLIWAGTVQTIELSVLSLAAAVALGLAGAVAKLSTHRVLRALATAYTTLIRSV CCEECCCHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH PDLVLMLLLFYSIQIWLNQITDLLGWDQIDIDPFVAGVLTLGFIYGAYFTETFRGAFLSV HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC PRGQLEAGAAYGMSGMRVFTRILFPQMMRFALPGIGNNWQVLVKATALVSIIGLADVVKA CCCHHHHHHHHCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHH AQDAGKSTFKMFFFILVAALVYLAITTLSNLVLRQLERRYSLGVRHAEL HHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; L-histidine [Periplasm]; H2O; ATP; L-ornithine [Periplasm]; L-arginine [Periplasm]; L-lysine [Periplasm] [C]
Specific reaction: ATP + L-histidine [Periplasm] + H2O = ADP + phosphate + L-histidine [Cytoplasm] ATP + L-ornithine [Periplasm] + H2O = ADP + phosphate + L-ornithine [Cytoplasm] ATP + L-arginine [Periplasm] + H2O = ADP + phosphate + L-arginine [Cytoplasm] ATP + L-lysine [P
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9205837; 9278503 [H]