| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
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The map label for this gene is hisM [H]
Identifier: 238026654
GI number: 238026654
Start: 1085543
End: 1086256
Strand: Direct
Name: hisM [H]
Synonym: bglu_1g10070
Alternate gene names: 238026654
Gene position: 1085543-1086256 (Clockwise)
Preceding gene: 238026653
Following gene: 238026655
Centisome position: 27.79
GC content: 68.21
Gene sequence:
>714_bases ATGATCGAGATCCTGCAGGAATTCGGCCGTGCGTTCCTCTACCACGACGGCCAGCGTTTCTCGGGCCTCGTGGTCACGCT GTGGCTGCTGGCGGCGTCGATCGGCATCGGCTTCGTCTGCGCGGTGCCGCTCGCGGTGGCGCGCGTCTCGCGCAGGCGCT GGCTGTGCGTGCCGGTGCGGCTCTACACCTACGTGTTTCGCGGCACGCCGCTCTACGTGCAACTGCTGCTGATCTACACC GGCCTCTACAGCCTCGAGGTCGTGCGCTCGCACTCGCTGCTCGACGCGTTCTTCCGCAGCGGGTATCACTGTACGGTGCT GGCCTTCGCGCTGAACACCTGCGCCTATACCACCGAGATCTTCGCCGGCGCGATCCGCGCCACGGCGCACGGCGAGGTCG AGGCGGCGCGCGCCTACGGCATGGGCGGCTGGACCCTGTACCGGCGCGTGATCCTGCCCTCGGCACTGCGCCGCGCGCTG CCGCTCTACAGCAACGAGGTGATCCTGATGCTGCACGCCACCACGGTGGCGTTCACGGCCACCGTGCCCGACATCCTGAA GGTCGCGCGCGACGCGAATTCGGCCACCTACCTGGCATTCCAGTCGTTCGGCGTGGCCGCGCTGCTCTATCTTGCGGTAT CGTTCGCACTCGTCGCGGCGTTTCGCCGGGCCGAGCGCCATTGGCTCGCGTATCTCGCGGCCGGCCGTCATTGA
Upstream 100 bases:
>100_bases TCGTCGCGGCGCTGGTCTATCTGGCGATCACGACGCTTTCCAACCTGGTGCTGCGGCAGCTGGAGCGGCGCTACTCGCTC GGCGTGAGGCACGCGGAACT
Downstream 100 bases:
>100_bases ATCGCCTTCATTTCCGGAGAGGCCAGTTGGCAGAGACCACGCAGCCGAACGCCGTCAGCAAGCTCGCGGCGCACGACATT CACAAGCGCTACGGCGACAA
Product: histidine/lysine/arginine/ornithine ABC transporter permease HisM
Products: ADP; phosphate; L-histidine [Cytoplasm]; ADP; L-ornithine [Cytoplasm]; L-arginine [Cytoplasm]; L-lysine [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 237; Mature: 237
Protein sequence:
>237_residues MIEILQEFGRAFLYHDGQRFSGLVVTLWLLAASIGIGFVCAVPLAVARVSRRRWLCVPVRLYTYVFRGTPLYVQLLLIYT GLYSLEVVRSHSLLDAFFRSGYHCTVLAFALNTCAYTTEIFAGAIRATAHGEVEAARAYGMGGWTLYRRVILPSALRRAL PLYSNEVILMLHATTVAFTATVPDILKVARDANSATYLAFQSFGVAALLYLAVSFALVAAFRRAERHWLAYLAAGRH
Sequences:
>Translated_237_residues MIEILQEFGRAFLYHDGQRFSGLVVTLWLLAASIGIGFVCAVPLAVARVSRRRWLCVPVRLYTYVFRGTPLYVQLLLIYT GLYSLEVVRSHSLLDAFFRSGYHCTVLAFALNTCAYTTEIFAGAIRATAHGEVEAARAYGMGGWTLYRRVILPSALRRAL PLYSNEVILMLHATTVAFTATVPDILKVARDANSATYLAFQSFGVAALLYLAVSFALVAAFRRAERHWLAYLAAGRH >Mature_237_residues MIEILQEFGRAFLYHDGQRFSGLVVTLWLLAASIGIGFVCAVPLAVARVSRRRWLCVPVRLYTYVFRGTPLYVQLLLIYT GLYSLEVVRSHSLLDAFFRSGYHCTVLAFALNTCAYTTEIFAGAIRATAHGEVEAARAYGMGGWTLYRRVILPSALRRAL PLYSNEVILMLHATTVAFTATVPDILKVARDANSATYLAFQSFGVAALLYLAVSFALVAAFRRAERHWLAYLAAGRH
Specific function: Part of the binding-protein-dependent transport system for histidine; probably responsible for the translocation of the substrate across the membrane [H]
COG id: COG4160
COG function: function code E; ABC-type arginine/histidine transport system, permease component
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transmembrane type-1 domain [H]
Homologues:
Organism=Escherichia coli, GI1788645, Length=232, Percent_Identity=61.6379310344828, Blast_Score=301, Evalue=2e-83, Organism=Escherichia coli, GI1787086, Length=214, Percent_Identity=32.7102803738318, Blast_Score=105, Evalue=2e-24, Organism=Escherichia coli, GI1788226, Length=175, Percent_Identity=35.4285714285714, Blast_Score=95, Evalue=5e-21, Organism=Escherichia coli, GI1787030, Length=208, Percent_Identity=29.3269230769231, Blast_Score=82, Evalue=4e-17, Organism=Escherichia coli, GI1788646, Length=197, Percent_Identity=28.4263959390863, Blast_Score=72, Evalue=4e-14, Organism=Escherichia coli, GI1786873, Length=195, Percent_Identity=27.1794871794872, Blast_Score=67, Evalue=1e-12, Organism=Escherichia coli, GI1787087, Length=165, Percent_Identity=25.4545454545455, Blast_Score=63, Evalue=2e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010065 - InterPro: IPR000515 [H]
Pfam domain/function: PF00528 BPD_transp_1 [H]
EC number: NA
Molecular weight: Translated: 26349; Mature: 26349
Theoretical pI: Translated: 9.86; Mature: 9.86
Prosite motif: PS50928 ABC_TM1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIEILQEFGRAFLYHDGQRFSGLVVTLWLLAASIGIGFVCAVPLAVARVSRRRWLCVPVR CHHHHHHHCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEHHH LYTYVFRGTPLYVQLLLIYTGLYSLEVVRSHSLLDAFFRSGYHCTVLAFALNTCAYTTEI HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH FAGAIRATAHGEVEAARAYGMGGWTLYRRVILPSALRRALPLYSNEVILMLHATTVAFTA HHHHHHHCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEHHHHHHH TVPDILKVARDANSATYLAFQSFGVAALLYLAVSFALVAAFRRAERHWLAYLAAGRH HHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MIEILQEFGRAFLYHDGQRFSGLVVTLWLLAASIGIGFVCAVPLAVARVSRRRWLCVPVR CHHHHHHHCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEHHH LYTYVFRGTPLYVQLLLIYTGLYSLEVVRSHSLLDAFFRSGYHCTVLAFALNTCAYTTEI HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH FAGAIRATAHGEVEAARAYGMGGWTLYRRVILPSALRRALPLYSNEVILMLHATTVAFTA HHHHHHHCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEHHHHHHH TVPDILKVARDANSATYLAFQSFGVAALLYLAVSFALVAAFRRAERHWLAYLAAGRH HHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; L-histidine [Periplasm]; H2O; ATP; L-ornithine [Periplasm]; L-arginine [Periplasm]; L-lysine [Periplasm] [C]
Specific reaction: ATP + L-histidine [Periplasm] + H2O = ADP + phosphate + L-histidine [Cytoplasm] ATP + L-ornithine [Periplasm] + H2O = ADP + phosphate + L-ornithine [Cytoplasm] ATP + L-arginine [Periplasm] + H2O = ADP + phosphate + L-arginine [Cytoplasm] ATP + L-lysine [P
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]