Definition Burkholderia glumae BGR1 chromosome chromosome 2, complete sequence.
Accession NC_012721
Length 2,827,333

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The map label for this gene is pqqB [H]

Identifier: 238025537

GI number: 238025537

Start: 2769170

End: 2770081

Strand: Reverse

Name: pqqB [H]

Synonym: bglu_2g22330

Alternate gene names: 238025537

Gene position: 2770081-2769170 (Counterclockwise)

Preceding gene: 238025538

Following gene: 238025536

Centisome position: 97.98

GC content: 71.6

Gene sequence:

>912_bases
ATGCACATCCAGATCCTGGGCTCCGCGGCGGGCGGCGGCTTTCCGCAGTGGAACTGCAACTGCGCGAACTGCGCGGGCTT
TCGCGCCGGCGCCATCGAGGCGCGCGCGCGCACCCAGTCGTCGCTGGCGATTTCCGACGACGGCGTCTCGTGGGTGCTCT
GCAACGCCTCGCCCGACATCCGCGCGCAGCTCCAGCAGTTCGCGCCGCTGCAGCCGGGCCGCGCGCTGCGCGACACCGGC
ATCGCCGCGATCGTGCTGATGGACAGCCAGATCGACCACACCACGGGGCTGCTCAGCCTGCGCGAGGGCTGCCCGCTCGA
CGTCTGGTGTACCGACATGGTCCACGAGGATCTCAGCACCGGCTTCCCGCTCTTCACGATGCTCGGCCACTGGAACGGCG
GCCTGCGCTGGAACCCGATCACGCCCGGGCGCGACTTCACGATCGCCGCGTGCCCGGCGCTGCGCTTCACGCCGTTCGTG
CTGCAAAGCGCGGCGCCTCCCTACTCGCCGCACCGGCACGATCCGCATCCGGGCGACAACATCGGCCTGGTGGTGGAGGA
CCGGCGCAGCGGCGGCAAGCTGTTCTACGCGCCGGGGCTCGGCGCCGTGGACGACGCGCTCGCCGCGCGCATGGCGGTGG
CCGACTGCCTGCTGGTGGACGGCACCCTCTGGCACGACGACGAGATGCGCCGGCGCGGCGTGGGCACGCGCACCGGCCGC
GAGATGGGCCACCTCGCGCAAAGCGGCCCCGGCGGCATGCTGGAGGTGCTCGAACGCTTCCCGGCGCAGCGCAAGATCCT
CACCCACATCAACAACACGAACCCGATCCTCGACGAACGCTCGCCGGAACGCGCCGAGCTCGCGCGCCGGCAGGTGGAGG
TCGCGTTCGACGGCATGCGGATCGAACTCTGA

Upstream 100 bases:

>100_bases
GACCAGCCTCGGTTCGCCGGGGCTGTTTTTCTTGTGAGCGGGCCGCGCGGCCTTCGCGGCGCTCGCTCGCGGCCCCCGGC
GGCCCTTCACGACCTCAAGC

Downstream 100 bases:

>100_bases
TCCGCGGGCGGCCGCTCCGCGCGCCGCCGCCACCGACTCACTGGAAACCGCACCGACATGAGCCAGACCGCCCAACCCGC
CCTCGATGCCGAGCAGTTCG

Product: pyrroloquinoline quinone biosynthesis protein PqqB

Products: NA

Alternate protein names: Pyrroloquinoline quinone biosynthesis protein B [H]

Number of amino acids: Translated: 303; Mature: 303

Protein sequence:

>303_residues
MHIQILGSAAGGGFPQWNCNCANCAGFRAGAIEARARTQSSLAISDDGVSWVLCNASPDIRAQLQQFAPLQPGRALRDTG
IAAIVLMDSQIDHTTGLLSLREGCPLDVWCTDMVHEDLSTGFPLFTMLGHWNGGLRWNPITPGRDFTIAACPALRFTPFV
LQSAAPPYSPHRHDPHPGDNIGLVVEDRRSGGKLFYAPGLGAVDDALAARMAVADCLLVDGTLWHDDEMRRRGVGTRTGR
EMGHLAQSGPGGMLEVLERFPAQRKILTHINNTNPILDERSPERAELARRQVEVAFDGMRIEL

Sequences:

>Translated_303_residues
MHIQILGSAAGGGFPQWNCNCANCAGFRAGAIEARARTQSSLAISDDGVSWVLCNASPDIRAQLQQFAPLQPGRALRDTG
IAAIVLMDSQIDHTTGLLSLREGCPLDVWCTDMVHEDLSTGFPLFTMLGHWNGGLRWNPITPGRDFTIAACPALRFTPFV
LQSAAPPYSPHRHDPHPGDNIGLVVEDRRSGGKLFYAPGLGAVDDALAARMAVADCLLVDGTLWHDDEMRRRGVGTRTGR
EMGHLAQSGPGGMLEVLERFPAQRKILTHINNTNPILDERSPERAELARRQVEVAFDGMRIEL
>Mature_303_residues
MHIQILGSAAGGGFPQWNCNCANCAGFRAGAIEARARTQSSLAISDDGVSWVLCNASPDIRAQLQQFAPLQPGRALRDTG
IAAIVLMDSQIDHTTGLLSLREGCPLDVWCTDMVHEDLSTGFPLFTMLGHWNGGLRWNPITPGRDFTIAACPALRFTPFV
LQSAAPPYSPHRHDPHPGDNIGLVVEDRRSGGKLFYAPGLGAVDDALAARMAVADCLLVDGTLWHDDEMRRRGVGTRTGR
EMGHLAQSGPGGMLEVLERFPAQRKILTHINNTNPILDERSPERAELARRQVEVAFDGMRIEL

Specific function: May be involved in the transport of PQQ or its precursor to the periplasm [H]

COG id: COG1235

COG function: function code R; Metal-dependent hydrolases of the beta-lactamase superfamily I

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the pqqB family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011842 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 32963; Mature: 32963

Theoretical pI: Translated: 6.34; Mature: 6.34

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.6 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
2.6 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
5.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHIQILGSAAGGGFPQWNCNCANCAGFRAGAIEARARTQSSLAISDDGVSWVLCNASPDI
CEEEEEECCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCEEEECCCCEEEEECCCCHH
RAQLQQFAPLQPGRALRDTGIAAIVLMDSQIDHTTGLLSLREGCPLDVWCTDMVHEDLST
HHHHHHHCCCCCCCHHHHCCEEEEEEECCCCCCHHHHHHHCCCCCCCEEHHHHHHHHHHC
GFPLFTMLGHWNGGLRWNPITPGRDFTIAACPALRFTPFVLQSAAPPYSPHRHDPHPGDN
CCCHHHHHHCCCCCCEECCCCCCCCEEEEECCCHHCCHHHHHCCCCCCCCCCCCCCCCCC
IGLVVEDRRSGGKLFYAPGLGAVDDALAARMAVADCLLVDGTLWHDDEMRRRGVGTRTGR
EEEEEEECCCCCEEEEECCCCHHHHHHHHHHHHHHHHEECCEEECCHHHHHCCCCCCCCH
EMGHLAQSGPGGMLEVLERFPAQRKILTHINNTNPILDERSPERAELARRQVEVAFDGMR
HHHHHHHCCCCHHHHHHHHCCHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHEEECCEE
IEL
EEC
>Mature Secondary Structure
MHIQILGSAAGGGFPQWNCNCANCAGFRAGAIEARARTQSSLAISDDGVSWVLCNASPDI
CEEEEEECCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCEEEECCCCEEEEECCCCHH
RAQLQQFAPLQPGRALRDTGIAAIVLMDSQIDHTTGLLSLREGCPLDVWCTDMVHEDLST
HHHHHHHCCCCCCCHHHHCCEEEEEEECCCCCCHHHHHHHCCCCCCCEEHHHHHHHHHHC
GFPLFTMLGHWNGGLRWNPITPGRDFTIAACPALRFTPFVLQSAAPPYSPHRHDPHPGDN
CCCHHHHHHCCCCCCEECCCCCCCCEEEEECCCHHCCHHHHHCCCCCCCCCCCCCCCCCC
IGLVVEDRRSGGKLFYAPGLGAVDDALAARMAVADCLLVDGTLWHDDEMRRRGVGTRTGR
EEEEEEECCCCCEEEEECCCCHHHHHHHHHHHHHHHHEECCEEECCHHHHHCCCCCCCCH
EMGHLAQSGPGGMLEVLERFPAQRKILTHINNTNPILDERSPERAELARRQVEVAFDGMR
HHHHHHHCCCCHHHHHHHHCCHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHEEECCEE
IEL
EEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA