Definition Burkholderia glumae BGR1 chromosome chromosome 2, complete sequence.
Accession NC_012721
Length 2,827,333

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The map label for this gene is 238025351

Identifier: 238025351

GI number: 238025351

Start: 2515205

End: 2515693

Strand: Reverse

Name: 238025351

Synonym: bglu_2g20270

Alternate gene names: NA

Gene position: 2515693-2515205 (Counterclockwise)

Preceding gene: 238025352

Following gene: 238025350

Centisome position: 88.98

GC content: 73.01

Gene sequence:

>489_bases
ATGTATCGAACCATCATGGCGGCGGTGGACGGCAGCGAATGCTCGACACGCGCGCTCGACGAGGCGATCCGCATGGCCCG
GCTGACGCAGGGGCGGGTCTTCGCCGTGCATGTGATCGACAAGGCGCAGGTGTTCCTGTACGCCGGATGCGACGACCCTG
CCGGCACGCTCGCGGGGTTGCGCGAGGCCGGCCGCCGGATTCTCGAGCGCGCGCGTGAGGCCCTGCGCGAGGCCGGCGCC
GACGGCGAGGCGCTCGCGATCGAGACGCACGATGTCGGCGAGGACGTGCCGTCATGCCTGCAGCGCGAGGCCGTGGCGCT
CGGCGCGGAGCTGGTGGTAATGGGCACGCATGGTCGGCGCGGCCTGGCGCGGGCGGTGCTCGGCAGCGTGGCCGAGCGCT
TCGTGAGGCAGGCCACGCTGCCGGTGATGGTCGCGCGCGACGCCCGAGGCCGGGACGGAATCGATGACGACACGCCCGAG
CGGCCCTGA

Upstream 100 bases:

>100_bases
GCCGGCGTCGGGCGGCCGGCCGCACGTGCCGGCGTGGCCGGCACCGCCGCGCCAGGCACGCCGGTGCCGGGCCGGGCCCT
TATCGATAACGAGGTGAGTC

Downstream 100 bases:

>100_bases
TACGCGCGACCGCAAAGCCGGCCGGACGCCGGTCGTCTGCGCGACGTTCGCGGTGTTCGGCGCGCTCGCGGGCCTGGGCA
TGCTGCTCGACGGCCTGCTG

Product: UspA domain-containing protein

Products: NA

Alternate protein names: USP MJ0531 [H]

Number of amino acids: Translated: 162; Mature: 162

Protein sequence:

>162_residues
MYRTIMAAVDGSECSTRALDEAIRMARLTQGRVFAVHVIDKAQVFLYAGCDDPAGTLAGLREAGRRILERAREALREAGA
DGEALAIETHDVGEDVPSCLQREAVALGAELVVMGTHGRRGLARAVLGSVAERFVRQATLPVMVARDARGRDGIDDDTPE
RP

Sequences:

>Translated_162_residues
MYRTIMAAVDGSECSTRALDEAIRMARLTQGRVFAVHVIDKAQVFLYAGCDDPAGTLAGLREAGRRILERAREALREAGA
DGEALAIETHDVGEDVPSCLQREAVALGAELVVMGTHGRRGLARAVLGSVAERFVRQATLPVMVARDARGRDGIDDDTPE
RP
>Mature_162_residues
MYRTIMAAVDGSECSTRALDEAIRMARLTQGRVFAVHVIDKAQVFLYAGCDDPAGTLAGLREAGRRILERAREALREAGA
DGEALAIETHDVGEDVPSCLQREAVALGAELVVMGTHGRRGLARAVLGSVAERFVRQATLPVMVARDARGRDGIDDDTPE
RP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the universal stress protein A family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014729
- InterPro:   IPR006015
- InterPro:   IPR006016 [H]

Pfam domain/function: PF00582 Usp [H]

EC number: NA

Molecular weight: Translated: 17412; Mature: 17412

Theoretical pI: Translated: 5.33; Mature: 5.33

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYRTIMAAVDGSECSTRALDEAIRMARLTQGRVFAVHVIDKAQVFLYAGCDDPAGTLAGL
CCCEEEEEECCCCHHHHHHHHHHHHHHHCCCCEEEEEEECCCEEEEEECCCCCHHHHHHH
REAGRRILERAREALREAGADGEALAIETHDVGEDVPSCLQREAVALGAELVVMGTHGRR
HHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCHHHHHHHHHHHHHHCCEEEEEECCCCH
GLARAVLGSVAERFVRQATLPVMVARDARGRDGIDDDTPERP
HHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MYRTIMAAVDGSECSTRALDEAIRMARLTQGRVFAVHVIDKAQVFLYAGCDDPAGTLAGL
CCCEEEEEECCCCHHHHHHHHHHHHHHHCCCCEEEEEEECCCEEEEEECCCCCHHHHHHH
REAGRRILERAREALREAGADGEALAIETHDVGEDVPSCLQREAVALGAELVVMGTHGRR
HHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCHHHHHHHHHHHHHHCCEEEEEECCCCH
GLARAVLGSVAERFVRQATLPVMVARDARGRDGIDDDTPERP
HHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]