Definition | Burkholderia glumae BGR1 chromosome chromosome 2, complete sequence. |
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Accession | NC_012721 |
Length | 2,827,333 |
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The map label for this gene is 238025351
Identifier: 238025351
GI number: 238025351
Start: 2515205
End: 2515693
Strand: Reverse
Name: 238025351
Synonym: bglu_2g20270
Alternate gene names: NA
Gene position: 2515693-2515205 (Counterclockwise)
Preceding gene: 238025352
Following gene: 238025350
Centisome position: 88.98
GC content: 73.01
Gene sequence:
>489_bases ATGTATCGAACCATCATGGCGGCGGTGGACGGCAGCGAATGCTCGACACGCGCGCTCGACGAGGCGATCCGCATGGCCCG GCTGACGCAGGGGCGGGTCTTCGCCGTGCATGTGATCGACAAGGCGCAGGTGTTCCTGTACGCCGGATGCGACGACCCTG CCGGCACGCTCGCGGGGTTGCGCGAGGCCGGCCGCCGGATTCTCGAGCGCGCGCGTGAGGCCCTGCGCGAGGCCGGCGCC GACGGCGAGGCGCTCGCGATCGAGACGCACGATGTCGGCGAGGACGTGCCGTCATGCCTGCAGCGCGAGGCCGTGGCGCT CGGCGCGGAGCTGGTGGTAATGGGCACGCATGGTCGGCGCGGCCTGGCGCGGGCGGTGCTCGGCAGCGTGGCCGAGCGCT TCGTGAGGCAGGCCACGCTGCCGGTGATGGTCGCGCGCGACGCCCGAGGCCGGGACGGAATCGATGACGACACGCCCGAG CGGCCCTGA
Upstream 100 bases:
>100_bases GCCGGCGTCGGGCGGCCGGCCGCACGTGCCGGCGTGGCCGGCACCGCCGCGCCAGGCACGCCGGTGCCGGGCCGGGCCCT TATCGATAACGAGGTGAGTC
Downstream 100 bases:
>100_bases TACGCGCGACCGCAAAGCCGGCCGGACGCCGGTCGTCTGCGCGACGTTCGCGGTGTTCGGCGCGCTCGCGGGCCTGGGCA TGCTGCTCGACGGCCTGCTG
Product: UspA domain-containing protein
Products: NA
Alternate protein names: USP MJ0531 [H]
Number of amino acids: Translated: 162; Mature: 162
Protein sequence:
>162_residues MYRTIMAAVDGSECSTRALDEAIRMARLTQGRVFAVHVIDKAQVFLYAGCDDPAGTLAGLREAGRRILERAREALREAGA DGEALAIETHDVGEDVPSCLQREAVALGAELVVMGTHGRRGLARAVLGSVAERFVRQATLPVMVARDARGRDGIDDDTPE RP
Sequences:
>Translated_162_residues MYRTIMAAVDGSECSTRALDEAIRMARLTQGRVFAVHVIDKAQVFLYAGCDDPAGTLAGLREAGRRILERAREALREAGA DGEALAIETHDVGEDVPSCLQREAVALGAELVVMGTHGRRGLARAVLGSVAERFVRQATLPVMVARDARGRDGIDDDTPE RP >Mature_162_residues MYRTIMAAVDGSECSTRALDEAIRMARLTQGRVFAVHVIDKAQVFLYAGCDDPAGTLAGLREAGRRILERAREALREAGA DGEALAIETHDVGEDVPSCLQREAVALGAELVVMGTHGRRGLARAVLGSVAERFVRQATLPVMVARDARGRDGIDDDTPE RP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the universal stress protein A family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR014729 - InterPro: IPR006015 - InterPro: IPR006016 [H]
Pfam domain/function: PF00582 Usp [H]
EC number: NA
Molecular weight: Translated: 17412; Mature: 17412
Theoretical pI: Translated: 5.33; Mature: 5.33
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYRTIMAAVDGSECSTRALDEAIRMARLTQGRVFAVHVIDKAQVFLYAGCDDPAGTLAGL CCCEEEEEECCCCHHHHHHHHHHHHHHHCCCCEEEEEEECCCEEEEEECCCCCHHHHHHH REAGRRILERAREALREAGADGEALAIETHDVGEDVPSCLQREAVALGAELVVMGTHGRR HHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCHHHHHHHHHHHHHHCCEEEEEECCCCH GLARAVLGSVAERFVRQATLPVMVARDARGRDGIDDDTPERP HHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCCCCC >Mature Secondary Structure MYRTIMAAVDGSECSTRALDEAIRMARLTQGRVFAVHVIDKAQVFLYAGCDDPAGTLAGL CCCEEEEEECCCCHHHHHHHHHHHHHHHCCCCEEEEEEECCCEEEEEECCCCCHHHHHHH REAGRRILERAREALREAGADGEALAIETHDVGEDVPSCLQREAVALGAELVVMGTHGRR HHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCHHHHHHHHHHHHHHCCEEEEEECCCCH GLARAVLGSVAERFVRQATLPVMVARDARGRDGIDDDTPERP HHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]