Definition | Burkholderia glumae BGR1 chromosome chromosome 2, complete sequence. |
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Accession | NC_012721 |
Length | 2,827,333 |
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The map label for this gene is 238025352
Identifier: 238025352
GI number: 238025352
Start: 2515859
End: 2516371
Strand: Reverse
Name: 238025352
Synonym: bglu_2g20280
Alternate gene names: NA
Gene position: 2516371-2515859 (Counterclockwise)
Preceding gene: 238025353
Following gene: 238025351
Centisome position: 89.0
GC content: 73.49
Gene sequence:
>513_bases ATGACCGCCGTCGGCTCCGCGCGGCCGCCGGCCGGCGGCGCCATGCGGGACTCGTTCGGGGGCTCGCTGATCCTGGTCGC GCTCGACGGCAGCCCCGGTTCCGACTTCGCGTTCAACGAGGCCTTCGCGTTGGCCTCGCTGGCCAAGGCACGCCTGTGCG CACTCTGCGTCGTCGAGCGCGCCTCGCGCCCGGTCGATCCGGCGTTGCCGTTCGCCGAGCAGGATACCGGCCGGCCGGGC CCGCAGGTGGTGGCGCGCGCGCTCTCGCGCGCGCGGCAGATCTGCGCGACCTACGAGATACCCTGCACCGTGCAAACGGT GGATTCCTGCGGCGACGGGGTGGCGGCCACGATCGTGCGCGTGGCCGCCGAGCAGGACGCTGGCTTGATCGTGATGGGAA CGCGTGGGGCGAGCGGGCTGCGCCGCTACTGGCTCGGTAGTGTCGCCGAGCAGGTGATGCGCATTGCGCCCTGCCCCGTG CTGCTCGCCCGCGCGCCGCACGGACTCGCTTAG
Upstream 100 bases:
>100_bases CCGAGGAGGTGGCGGCGCTGATCGCGTTCCTGTGCTCGGCCGAGGCGGCCTTCATCACCGGCGCCGAGATCGCCATCAAC GGCGGGATGCAGATGCAATG
Downstream 100 bases:
>100_bases CCGGCCACGGCAAGCGGGCCAGGGCTGGCCGCCGCATGCGTCATGGCGCGGCCGGCCGCCAGCCGGCCGGCGTCGGGCGG CCGGCCGCACGTGCCGGCGT
Product: UspA domain-containing protein
Products: NA
Alternate protein names: UspA Domain Protein; Universal Stress Protein; Universal Stress Protein UspA; Universal Stress Family Protein; Universal Stress Protein Usp; Universelle Stress Protein; Universal Stress Protein UspA Family
Number of amino acids: Translated: 170; Mature: 169
Protein sequence:
>170_residues MTAVGSARPPAGGAMRDSFGGSLILVALDGSPGSDFAFNEAFALASLAKARLCALCVVERASRPVDPALPFAEQDTGRPG PQVVARALSRARQICATYEIPCTVQTVDSCGDGVAATIVRVAAEQDAGLIVMGTRGASGLRRYWLGSVAEQVMRIAPCPV LLARAPHGLA
Sequences:
>Translated_170_residues MTAVGSARPPAGGAMRDSFGGSLILVALDGSPGSDFAFNEAFALASLAKARLCALCVVERASRPVDPALPFAEQDTGRPG PQVVARALSRARQICATYEIPCTVQTVDSCGDGVAATIVRVAAEQDAGLIVMGTRGASGLRRYWLGSVAEQVMRIAPCPV LLARAPHGLA >Mature_169_residues TAVGSARPPAGGAMRDSFGGSLILVALDGSPGSDFAFNEAFALASLAKARLCALCVVERASRPVDPALPFAEQDTGRPGP QVVARALSRARQICATYEIPCTVQTVDSCGDGVAATIVRVAAEQDAGLIVMGTRGASGLRRYWLGSVAEQVMRIAPCPVL LARAPHGLA
Specific function: Unknown
COG id: COG0589
COG function: function code T; Universal stress protein UspA and related nucleotide-binding proteins
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17492; Mature: 17361
Theoretical pI: Translated: 8.12; Mature: 8.12
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.5 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 5.9 %Cys+Met (Translated Protein) 3.6 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 5.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTAVGSARPPAGGAMRDSFGGSLILVALDGSPGSDFAFNEAFALASLAKARLCALCVVER CCCCCCCCCCCCCCCHHCCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH ASRPVDPALPFAEQDTGRPGPQVVARALSRARQICATYEIPCTVQTVDSCGDGVAATIVR CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCHHHHHHHH VAAEQDAGLIVMGTRGASGLRRYWLGSVAEQVMRIAPCPVLLARAPHGLA HHHCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHCCCCCEECCCCCCCC >Mature Secondary Structure TAVGSARPPAGGAMRDSFGGSLILVALDGSPGSDFAFNEAFALASLAKARLCALCVVER CCCCCCCCCCCCCCHHCCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH ASRPVDPALPFAEQDTGRPGPQVVARALSRARQICATYEIPCTVQTVDSCGDGVAATIVR CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCHHHHHHHH VAAEQDAGLIVMGTRGASGLRRYWLGSVAEQVMRIAPCPVLLARAPHGLA HHHCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHCCCCCEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA