Definition Burkholderia glumae BGR1 chromosome chromosome 2, complete sequence.
Accession NC_012721
Length 2,827,333

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The map label for this gene is yurR [H]

Identifier: 238025203

GI number: 238025203

Start: 2335444

End: 2336616

Strand: Reverse

Name: yurR [H]

Synonym: bglu_2g18740

Alternate gene names: 238025203

Gene position: 2336616-2335444 (Counterclockwise)

Preceding gene: 238025204

Following gene: 238025202

Centisome position: 82.64

GC content: 71.27

Gene sequence:

>1173_bases
ATGAGTTCCCGCATCGTTGTCGTCGGCGGCGGCGTGATCGGCAGCGCGACCGCGTATTTCCTGCGGGCCTCGGACCCGAG
CGCGTCGGTCACCGTGATCGAGCGCGACCCGACCTACGCGCGCTCGTCGTCGGCGCTGTCGGCCGCCTCGATCCGGCAGC
AGTTCTCCACGCCGCTGTCGATCCGCATGTCGCTGTTCGGCATCACGTTCCTGCGCGAACTCGGCGAACGGCTCGCGGTC
GGCGGCGAGCGCCCGTCGATCGGCCTGCACGAGGGCGGCTATCTGTTCCTTGCCACGCCGGCCGGCGAGGCCACGCTGCG
CGAGAACCACGCGCTGCAGCTGGCCGAGGGCGCGCAGATCCGGCTCATGGCGCCCGACGCACTGCGCGCGCGATTTCCCT
GGCTCAACGTCGACGATCTCGCCGCGGGCGCCTACGGCGAGCGCGGCGAGGGCTGGTTCGACGGCTACGGGCTGGTGCAG
GCGCTGCGCAGGAAGGCACAGTCGCTCGGCGCGCGCTACCTGGCCGCCGAGGTGGTGGGGCTGGTGCGCGAGGGGCGCCG
CATCACGCAGGTCGTCACGGCCGACGGCGAGCGCCATCCGTGCGATACCGTGGTCAACGCGGCCGGCGCCTGGGCGAAGC
GGATCGCGGCGCTGGCCGGCATCGAGCTCCCGGTTCACGCACGGCGCCGCAGCATCTTCAACGTGTCGTCGCCGGCCCGG
CTCGGCGCCTGCCCGCTGCTGGTCGATCCGGGCGGCGTGTATTTCCGTCCCGAGGGGCGCACCTACCTTTGCGGCAGCTC
GCCGTCGCCCGCGCACGACGCCGACGACCTGCCGCTCGACGAGGTCGATCACGCGCTGTTCGACGAGGTGATCTGGCCGG
CGCTCGCGCATCGCGTGCCGGGCTTCGAGGCGCTGCGCGTGGAGCGCAGCTGGTCCGGCTACTACGAGTACAACGTGTTC
GATCACAACGCGATCATCGGCTACCACCCCGAACTCGAGAACTGCGTGTTCGCCAATGGCTTCAGCGGGCACGGCCTGCA
GCAGGGGCCGGCCACCGGGCGCGGCGTGAGCGAGCTGATCCTGAACGGGCGCTACACCTCGCTCGATCTGTCCGAACTCG
ACTGGCGGCGCGTGCTGGAGCGGCGCCCGATCGTCGAGAAGAACGTGGTGTAA

Upstream 100 bases:

>100_bases
TCAACTACTCGTCGGCGCTGCCGCTCGCGCAGGGCATCGACTTCAACCTCGGCTGAGCGCGAGGCACGCGCGCCTGGCTG
ACCCCGGCAATGGAGCCTCC

Downstream 100 bases:

>100_bases
CGGGAGCGCGGGCGATGATGTATGACTTCACCATGCCGTTTCGCGAGCCGGCCGGCTCGCCGATTCGCGAACTGTTCAAG
TACCTCGGCCAGCCGGGGAT

Product: FAD dependent oxidoreductase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 390; Mature: 389

Protein sequence:

>390_residues
MSSRIVVVGGGVIGSATAYFLRASDPSASVTVIERDPTYARSSSALSAASIRQQFSTPLSIRMSLFGITFLRELGERLAV
GGERPSIGLHEGGYLFLATPAGEATLRENHALQLAEGAQIRLMAPDALRARFPWLNVDDLAAGAYGERGEGWFDGYGLVQ
ALRRKAQSLGARYLAAEVVGLVREGRRITQVVTADGERHPCDTVVNAAGAWAKRIAALAGIELPVHARRRSIFNVSSPAR
LGACPLLVDPGGVYFRPEGRTYLCGSSPSPAHDADDLPLDEVDHALFDEVIWPALAHRVPGFEALRVERSWSGYYEYNVF
DHNAIIGYHPELENCVFANGFSGHGLQQGPATGRGVSELILNGRYTSLDLSELDWRRVLERRPIVEKNVV

Sequences:

>Translated_390_residues
MSSRIVVVGGGVIGSATAYFLRASDPSASVTVIERDPTYARSSSALSAASIRQQFSTPLSIRMSLFGITFLRELGERLAV
GGERPSIGLHEGGYLFLATPAGEATLRENHALQLAEGAQIRLMAPDALRARFPWLNVDDLAAGAYGERGEGWFDGYGLVQ
ALRRKAQSLGARYLAAEVVGLVREGRRITQVVTADGERHPCDTVVNAAGAWAKRIAALAGIELPVHARRRSIFNVSSPAR
LGACPLLVDPGGVYFRPEGRTYLCGSSPSPAHDADDLPLDEVDHALFDEVIWPALAHRVPGFEALRVERSWSGYYEYNVF
DHNAIIGYHPELENCVFANGFSGHGLQQGPATGRGVSELILNGRYTSLDLSELDWRRVLERRPIVEKNVV
>Mature_389_residues
SSRIVVVGGGVIGSATAYFLRASDPSASVTVIERDPTYARSSSALSAASIRQQFSTPLSIRMSLFGITFLRELGERLAVG
GERPSIGLHEGGYLFLATPAGEATLRENHALQLAEGAQIRLMAPDALRARFPWLNVDDLAAGAYGERGEGWFDGYGLVQA
LRRKAQSLGARYLAAEVVGLVREGRRITQVVTADGERHPCDTVVNAAGAWAKRIAALAGIELPVHARRRSIFNVSSPARL
GACPLLVDPGGVYFRPEGRTYLCGSSPSPAHDADDLPLDEVDHALFDEVIWPALAHRVPGFEALRVERSWSGYYEYNVFD
HNAIIGYHPELENCVFANGFSGHGLQQGPATGRGVSELILNGRYTSLDLSELDWRRVLERRPIVEKNVV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the DadA oxidoreductase family [H]

Homologues:

Organism=Homo sapiens, GI8923708, Length=413, Percent_Identity=41.1622276029056, Blast_Score=303, Evalue=3e-82,
Organism=Homo sapiens, GI197927446, Length=398, Percent_Identity=26.8844221105528, Blast_Score=87, Evalue=3e-17,
Organism=Homo sapiens, GI21361378, Length=398, Percent_Identity=26.8844221105528, Blast_Score=87, Evalue=3e-17,
Organism=Homo sapiens, GI24797151, Length=400, Percent_Identity=25.25, Blast_Score=73, Evalue=4e-13,
Organism=Caenorhabditis elegans, GI17541536, Length=431, Percent_Identity=35.0348027842227, Blast_Score=249, Evalue=2e-66,
Organism=Drosophila melanogaster, GI20129729, Length=415, Percent_Identity=39.2771084337349, Blast_Score=279, Evalue=2e-75,
Organism=Drosophila melanogaster, GI17985989, Length=409, Percent_Identity=33.9853300733496, Blast_Score=223, Evalue=2e-58,
Organism=Drosophila melanogaster, GI28571104, Length=397, Percent_Identity=25.4408060453401, Blast_Score=77, Evalue=3e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006076 [H]

Pfam domain/function: PF01266 DAO [H]

EC number: NA

Molecular weight: Translated: 42361; Mature: 42230

Theoretical pI: Translated: 6.68; Mature: 6.68

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
0.5 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSRIVVVGGGVIGSATAYFLRASDPSASVTVIERDPTYARSSSALSAASIRQQFSTPLS
CCCCEEEEECCCCCCCEEEEEEECCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHCCCHH
IRMSLFGITFLRELGERLAVGGERPSIGLHEGGYLFLATPAGEATLRENHALQLAEGAQI
HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCEEEECCCEE
RLMAPDALRARFPWLNVDDLAAGAYGERGEGWFDGYGLVQALRRKAQSLGARYLAAEVVG
EEECCHHHHHHCCCCCHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
LVREGRRITQVVTADGERHPCDTVVNAAGAWAKRIAALAGIELPVHARRRSIFNVSSPAR
HHHCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCHH
LGACPLLVDPGGVYFRPEGRTYLCGSSPSPAHDADDLPLDEVDHALFDEVIWPALAHRVP
HCCCEEEECCCCEEECCCCCEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCC
GFEALRVERSWSGYYEYNVFDHNAIIGYHPELENCVFANGFSGHGLQQGPATGRGVSELI
CCCEEEEECCCCCEEEEEEEECCEEEEECCCCCCEEEECCCCCCCCCCCCCCCCCHHHHH
LNGRYTSLDLSELDWRRVLERRPIVEKNVV
HCCCCCCCCHHHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure 
SSRIVVVGGGVIGSATAYFLRASDPSASVTVIERDPTYARSSSALSAASIRQQFSTPLS
CCCEEEEECCCCCCCEEEEEEECCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHCCCHH
IRMSLFGITFLRELGERLAVGGERPSIGLHEGGYLFLATPAGEATLRENHALQLAEGAQI
HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCEEEECCCEE
RLMAPDALRARFPWLNVDDLAAGAYGERGEGWFDGYGLVQALRRKAQSLGARYLAAEVVG
EEECCHHHHHHCCCCCHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
LVREGRRITQVVTADGERHPCDTVVNAAGAWAKRIAALAGIELPVHARRRSIFNVSSPAR
HHHCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCHH
LGACPLLVDPGGVYFRPEGRTYLCGSSPSPAHDADDLPLDEVDHALFDEVIWPALAHRVP
HCCCEEEECCCCEEECCCCCEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCC
GFEALRVERSWSGYYEYNVFDHNAIIGYHPELENCVFANGFSGHGLQQGPATGRGVSELI
CCCEEEEECCCCCEEEEEEEECCEEEEECCCCCCEEEECCCCCCCCCCCCCCCCCHHHHH
LNGRYTSLDLSELDWRRVLERRPIVEKNVV
HCCCCCCCCHHHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]