Definition Burkholderia glumae BGR1 chromosome chromosome 2, complete sequence.
Accession NC_012721
Length 2,827,333

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The map label for this gene is 238025188

Identifier: 238025188

GI number: 238025188

Start: 2316674

End: 2317681

Strand: Reverse

Name: 238025188

Synonym: bglu_2g18590

Alternate gene names: NA

Gene position: 2317681-2316674 (Counterclockwise)

Preceding gene: 238025189

Following gene: 238025186

Centisome position: 81.97

GC content: 69.84

Gene sequence:

>1008_bases
GTGCGCGCGATGGTCGTGACTTTCGCCCTGCTGCTGGCGGCGGCCGGCATCATCTATTTTTCCTGCGAAACCTTCGTGAA
CGGCGTGGAATGGCTCGGCCGCAAGCTGAACCTGACGCAGACGGCCACCGGCACGATCCTCGCCGCGTTCGGCACCGCGC
TGCCCGAGAGCGTGGTCACGCTGGTGGCGGTCGCCTTCGGCACCACGCCGGCGCACAAGGAGATCGGCGTGGGCGCCGCG
ATCGGCGGCCCGCTGGCGTTGAGCACCGTGGCCTACTCGGTGGTGGGCTTCGCGCTGCTGGCCGTCGCGCGCCGCGCGGG
CCGCGATGCCAAGGCCGGGGTGGACGCAAACACCGCGCAGCTGCGCCGCGACCAGCTCTGGTTTCTCGCGATCTTCGTCG
CCAAGATCGGCCTCGGCCTGGTGGTGTTCCAGTTCAAGCCGCTGCTCGGCATCGCGTTCCTGGCGGCCTATGCGTTCTAC
TGCTGGCGCGAGCTGACGGCCGACGGCGACGGCGCCGCCCACGACGAACTCGAGCCGCTGATGCTGCGGCCGCGCTCGGA
CGACCCGGCGCTCGGCTGGGTGATCCTGCAGACGCTGGGCGCGCTGGTGGTGATCTTCGCCGCCTCGCACCTGTTCGTCG
GCCAGATCGGCGCGGTGGGGCCGTGGCTCGGCCTGAGCCCGCAGCTGACGGCGCTGCTGTTCAGCCCGATCGCGACCGAG
CTGCCCGAGATCATGAACGCGGTGATCTGGGTGCGCCAGCGCAAGGAGCGGCTCGCGCTCGCCAATATCAGCGGCGCGAT
GATGATCCAGGCGACGATCCCCACCGCGTTCGGCCTGTTCTTCACGCCGTGGCACCTGGCGTCGCCTTCGATCCTCGCGG
CGGTGATGACGGCGATCGCGATCGTGTTCCTGCAGTTCGTGTTTCGCGCGCCGCGGGTCAGCAGCGGCCTGCTGGCCTGC
GTGGGCGGTCTCTATGCGGTGTTCGCCGCGCTGCTGTTCGTGATCTGA

Upstream 100 bases:

>100_bases
GGCCGGGCGGAGGGCAGCGTCATGGTTGCGTCGCCCGGCCCTGGAGATAACAACAGATGTTCCTCACATCCCCATTCCCG
GTAGACATCGTCGTGGCGAG

Downstream 100 bases:

>100_bases
GGTTCGTGATCCGCGGTGCGGGAGCGGGGCGGCCTGGCCCGCGCTCGCACGGCGTGAACCGTACCCGCGTCCCGCGGCCC
CGGCCGGCACCTGGAGCGCA

Product: putative Ca2+/Na+ antiporter

Products: NA

Alternate protein names: Ca2+/Na+ Antiporter; Sodium/Calcium Exchanger Protein; Sodium/Calcium Antiporter; Sodium/Calcium Exchanger; Cation Antiporter; Inner Membrane Protein; Na+/Ca+ Exchanger Protein; Ca2+Cation Antiporter CaCA Family; Sodium/Calcium Exchanger Family Protein; Ca2+/H+ Antiporter

Number of amino acids: Translated: 335; Mature: 335

Protein sequence:

>335_residues
MRAMVVTFALLLAAAGIIYFSCETFVNGVEWLGRKLNLTQTATGTILAAFGTALPESVVTLVAVAFGTTPAHKEIGVGAA
IGGPLALSTVAYSVVGFALLAVARRAGRDAKAGVDANTAQLRRDQLWFLAIFVAKIGLGLVVFQFKPLLGIAFLAAYAFY
CWRELTADGDGAAHDELEPLMLRPRSDDPALGWVILQTLGALVVIFAASHLFVGQIGAVGPWLGLSPQLTALLFSPIATE
LPEIMNAVIWVRQRKERLALANISGAMMIQATIPTAFGLFFTPWHLASPSILAAVMTAIAIVFLQFVFRAPRVSSGLLAC
VGGLYAVFAALLFVI

Sequences:

>Translated_335_residues
MRAMVVTFALLLAAAGIIYFSCETFVNGVEWLGRKLNLTQTATGTILAAFGTALPESVVTLVAVAFGTTPAHKEIGVGAA
IGGPLALSTVAYSVVGFALLAVARRAGRDAKAGVDANTAQLRRDQLWFLAIFVAKIGLGLVVFQFKPLLGIAFLAAYAFY
CWRELTADGDGAAHDELEPLMLRPRSDDPALGWVILQTLGALVVIFAASHLFVGQIGAVGPWLGLSPQLTALLFSPIATE
LPEIMNAVIWVRQRKERLALANISGAMMIQATIPTAFGLFFTPWHLASPSILAAVMTAIAIVFLQFVFRAPRVSSGLLAC
VGGLYAVFAALLFVI
>Mature_335_residues
MRAMVVTFALLLAAAGIIYFSCETFVNGVEWLGRKLNLTQTATGTILAAFGTALPESVVTLVAVAFGTTPAHKEIGVGAA
IGGPLALSTVAYSVVGFALLAVARRAGRDAKAGVDANTAQLRRDQLWFLAIFVAKIGLGLVVFQFKPLLGIAFLAAYAFY
CWRELTADGDGAAHDELEPLMLRPRSDDPALGWVILQTLGALVVIFAASHLFVGQIGAVGPWLGLSPQLTALLFSPIATE
LPEIMNAVIWVRQRKERLALANISGAMMIQATIPTAFGLFFTPWHLASPSILAAVMTAIAIVFLQFVFRAPRVSSGLLAC
VGGLYAVFAALLFVI

Specific function: Unknown

COG id: COG0530

COG function: function code P; Ca2+/Na+ antiporter

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 35488; Mature: 35488

Theoretical pI: Translated: 8.84; Mature: 8.84

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRAMVVTFALLLAAAGIIYFSCETFVNGVEWLGRKLNLTQTATGTILAAFGTALPESVVT
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHH
LVAVAFGTTPAHKEIGVGAAIGGPLALSTVAYSVVGFALLAVARRAGRDAKAGVDANTAQ
HHHHHHCCCCCCHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHH
LRRDQLWFLAIFVAKIGLGLVVFQFKPLLGIAFLAAYAFYCWRELTADGDGAAHDELEPL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHH
MLRPRSDDPALGWVILQTLGALVVIFAASHLFVGQIGAVGPWLGLSPQLTALLFSPIATE
EECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHH
LPEIMNAVIWVRQRKERLALANISGAMMIQATIPTAFGLFFTPWHLASPSILAAVMTAIA
HHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCHHHHHHHCCHHHCCHHHHHHHHHHHH
IVFLQFVFRAPRVSSGLLACVGGLYAVFAALLFVI
HHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHC
>Mature Secondary Structure
MRAMVVTFALLLAAAGIIYFSCETFVNGVEWLGRKLNLTQTATGTILAAFGTALPESVVT
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHH
LVAVAFGTTPAHKEIGVGAAIGGPLALSTVAYSVVGFALLAVARRAGRDAKAGVDANTAQ
HHHHHHCCCCCCHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHH
LRRDQLWFLAIFVAKIGLGLVVFQFKPLLGIAFLAAYAFYCWRELTADGDGAAHDELEPL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHH
MLRPRSDDPALGWVILQTLGALVVIFAASHLFVGQIGAVGPWLGLSPQLTALLFSPIATE
EECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHH
LPEIMNAVIWVRQRKERLALANISGAMMIQATIPTAFGLFFTPWHLASPSILAAVMTAIA
HHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCHHHHHHHCCHHHCCHHHHHHHHHHHH
IVFLQFVFRAPRVSSGLLACVGGLYAVFAALLFVI
HHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA