Click here to switch to the map view.

The map label for this gene is opuCB [H]

Identifier: 238025063

GI number: 238025063

Start: 2157216

End: 2157932

Strand: Reverse

Name: opuCB [H]

Synonym: bglu_2g17190

Alternate gene names: 238025063

Gene position: 2157932-2157216 (Counterclockwise)

Preceding gene: 238025064

Following gene: 238025062

Centisome position: 76.32

GC content: 69.74

Gene sequence:

>717_bases
ATGACTCGACGCACTGTCCGTATCGCGGGCAGCCTGTTGCTGGCCATCATCGTGTTGGGCTGGATCGCGCAGGCGATCGG
CGCGGACACATGGCGGCAATACTCGGGCGACCTCGTCTACTACACCGGCCGGCACCTGATGCTGGTGGGCTATTCGATGG
CGCTCGCGATCCTGGTGGGCATTCCGGCCGGCGTCGCGCTGAGCCGGCCGTCCGCCGCGCGCCATGCCGAGCGCTTCATG
CAGGTGTTCAACATCGGCAACACGGTGCCCTCGCTCGCGGTGCTCGCGATCGCGCTGGGCATCTTCGGCATCGGCGAGGC
GCCCGCGATCGTCGCGCTGTTCCTCGCCTCGCTGCTGCCGATCACGCGCAACGCCTACGAGGGCATGCGCAACGTGCCCG
CGGCGCTGCGCGAGGCGGCGCGCGGCATCGGCATGACGCCGTGGCAATCGCTGGTGCGCGTCGAACTGCCGAATGCGCTG
CCGATCATCATCGGCGGCGTGCGCACCGCGCTGGCGATCAATGTCGGCACCGCGCCGCTCGCCTACCTGATCGGTGCCGA
CAGCCTCGGCACGCTGATCTTCCCCGGCATCTATCTCGACAACCAGCAGATGCTGCTGCTCGGCGCCGCCGCCACGGCGG
TGCTCGCGCTGCTGCTCGACGGCATCGTCGCGGCCGGCAGCCGCCACGTGCTGGCCCGCAATGGAGGTGCCGCATGA

Upstream 100 bases:

>100_bases
GGCCTGCCCGGGATCCGTACCTTCCCATTCGCGACGCCTCACGGCGTTCCCGCGGCGTGTGGCGGTCCGCATGCGCCGCT
CCGATAAGGAGGCACTTTTC

Downstream 100 bases:

>100_bases
GCGTCGCGCAATTCGCCCGCGCCGTCCGGGCTGCCGGTGCCGCGCTGGCACGCCGCTGCGCGGCCGCCGTCGCGCTGGTG
CCGATCGTCTCGCTGGCCTC

Product: amino acid ABC transporter permease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 238; Mature: 237

Protein sequence:

>238_residues
MTRRTVRIAGSLLLAIIVLGWIAQAIGADTWRQYSGDLVYYTGRHLMLVGYSMALAILVGIPAGVALSRPSAARHAERFM
QVFNIGNTVPSLAVLAIALGIFGIGEAPAIVALFLASLLPITRNAYEGMRNVPAALREAARGIGMTPWQSLVRVELPNAL
PIIIGGVRTALAINVGTAPLAYLIGADSLGTLIFPGIYLDNQQMLLLGAAATAVLALLLDGIVAAGSRHVLARNGGAA

Sequences:

>Translated_238_residues
MTRRTVRIAGSLLLAIIVLGWIAQAIGADTWRQYSGDLVYYTGRHLMLVGYSMALAILVGIPAGVALSRPSAARHAERFM
QVFNIGNTVPSLAVLAIALGIFGIGEAPAIVALFLASLLPITRNAYEGMRNVPAALREAARGIGMTPWQSLVRVELPNAL
PIIIGGVRTALAINVGTAPLAYLIGADSLGTLIFPGIYLDNQQMLLLGAAATAVLALLLDGIVAAGSRHVLARNGGAA
>Mature_237_residues
TRRTVRIAGSLLLAIIVLGWIAQAIGADTWRQYSGDLVYYTGRHLMLVGYSMALAILVGIPAGVALSRPSAARHAERFMQ
VFNIGNTVPSLAVLAIALGIFGIGEAPAIVALFLASLLPITRNAYEGMRNVPAALREAARGIGMTPWQSLVRVELPNALP
IIIGGVRTALAINVGTAPLAYLIGADSLGTLIFPGIYLDNQQMLLLGAAATAVLALLLDGIVAAGSRHVLARNGGAA

Specific function: Involved in a high affinity multicomponent binding- protein-dependent transport system for glycine betaine, carnitine and choline; probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG1174

COG function: function code E; ABC-type proline/glycine betaine transport systems, permease component

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1788449, Length=189, Percent_Identity=39.1534391534392, Blast_Score=117, Evalue=4e-28,
Organism=Escherichia coli, GI1788451, Length=195, Percent_Identity=33.8461538461538, Blast_Score=94, Evalue=6e-21,
Organism=Escherichia coli, GI1789033, Length=179, Percent_Identity=31.2849162011173, Blast_Score=85, Evalue=3e-18,
Organism=Escherichia coli, GI87081802, Length=116, Percent_Identity=36.2068965517241, Blast_Score=62, Evalue=3e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 24799; Mature: 24668

Theoretical pI: Translated: 10.46; Mature: 10.46

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTRRTVRIAGSLLLAIIVLGWIAQAIGADTWRQYSGDLVYYTGRHLMLVGYSMALAILVG
CCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCEEEECCCEEEEHHHHHHHHHHHH
IPAGVALSRPSAARHAERFMQVFNIGNTVPSLAVLAIALGIFGIGEAPAIVALFLASLLP
CCCCCEECCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH
ITRNAYEGMRNVPAALREAARGIGMTPWQSLVRVELPNALPIIIGGVRTALAINVGTAPL
HHHHHHHHHHCCHHHHHHHHHCCCCCHHHHHHHHCCCCCCCEEEHHHHHHEEEECCCHHH
AYLIGADSLGTLIFPGIYLDNQQMLLLGAAATAVLALLLDGIVAAGSRHVLARNGGAA
HHHHCCCCCCHHHCCCEEECCCCEEEEHHHHHHHHHHHHHHHHHCCCCEEEECCCCCC
>Mature Secondary Structure 
TRRTVRIAGSLLLAIIVLGWIAQAIGADTWRQYSGDLVYYTGRHLMLVGYSMALAILVG
CCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCEEEECCCEEEEHHHHHHHHHHHH
IPAGVALSRPSAARHAERFMQVFNIGNTVPSLAVLAIALGIFGIGEAPAIVALFLASLLP
CCCCCEECCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH
ITRNAYEGMRNVPAALREAARGIGMTPWQSLVRVELPNALPIIIGGVRTALAINVGTAPL
HHHHHHHHHHCCHHHHHHHHHCCCCCHHHHHHHHCCCCCCCEEEHHHHHHEEEECCCHHH
AYLIGADSLGTLIFPGIYLDNQQMLLLGAAATAVLALLLDGIVAAGSRHVLARNGGAA
HHHHCCCCCCHHHCCCEEECCCCEEEEHHHHHHHHHHHHHHHHHCCCCEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 10216873; 9384377 [H]