Definition | Burkholderia glumae BGR1 chromosome chromosome 2, complete sequence. |
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Accession | NC_012721 |
Length | 2,827,333 |
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The map label for this gene is nhaK [H]
Identifier: 238025046
GI number: 238025046
Start: 2136052
End: 2137635
Strand: Reverse
Name: nhaK [H]
Synonym: bglu_2g17030
Alternate gene names: 238025046
Gene position: 2137635-2136052 (Counterclockwise)
Preceding gene: 238025047
Following gene: 238025045
Centisome position: 75.61
GC content: 71.4
Gene sequence:
>1584_bases GTGTCCGCCGTGTCCGTCTTCAAACTGGTCCTGCTGTCGTTTGCCGCGATCGTCGTGCTCGAGCTCGTCGCCAAGAAGCT GCGGCTGCCGCCGGCCGCCGCGCTGCTGGTGGGCGGCGCGGGCATCGCGTTCGTGCCGGGCCTGCCGCCCGTCAATCTCG ATCCCGATCTGGTGCTGATCGTGTTCCTGCCGCCGCTGCTGGTGGACGGCGCGTATTTCTCGGTCTGGGAGGAGTTCAAG CGCAACCTGGGCGGCATCATGCTGCTGGCGATCGGCGCGGTGGTGTTCACCACGCTCGCGGTGGGCGTGGCCGTGCATTG GGCCGTGCCGGCGCTGCCGTGGGCGGCCTGCTTCACGCTCGGCGCGATCGTCTCGCCGCCCGATGCGGTGGCCGCCAAGG CCGTGCTCGAACGGGTCGCGCTGCCGCGCCGGCTGATGGTGCTGCTCGAAGGCGAGAGCCTGCTCAACGACGCGGCCGGC CTGGTGCTGTTCCGCTTCGCGGTGGCCGCCGCGCTGACCGGCGCGTTCAGCTTCGAGGGCGCGGTGGTGCGCTTCGCGGA GCTCGCGCTGGGCGGCGTGGCGGTGGGCTTCATCATCGGCTGGCTGCTGATCCGGTTCATTCGGTTGTTGTCCGACGAAT ACCTGATCGTCACGACCGCCGTGCTCGGCGGCTGGGTCAGCTACATCGCCGGCGAGACGCTGGAGGTGTCGGGCTTGATC TCGGCCGTCACGATGGGCATGATGCTCGGCTGGCATCAGCACGAGGTCTTCAGCGCCACGGTGCGGGTCCGCTCCACGGC GTTCTGGCAGATCATGGTGTTCCTGCTGGAGGCGCTGGTGTTCGTGCTGATCGGGCTGTCGCTGCGCGGCGTGATGCTGC GCCTGGGCGGCTTCGGCGCGGTGTTCGCCACCATGACGCCGGCCCTGCTCGCGGTGCTGGCCGCCGTGATCGGCTCGCGC TTCGTCTGGGTGTTCGCGGTCGAGGCGCTGAAGCTGCCGCGCCGCTGGCTCGGCCACGCGCAGCCGCGCGCCGACTGGCG CGCGGCCACCGTGATGAGCTGGGCCGGCATGCGTGGGGTGGTGACGCTGGCCATCGCGCTGTCGCTGCCCGAGGCGATGC CGGGCCGCGACATGATCCTGGTGGCCGCGTTCGCGGTGATCCTGGTCACGGTGCTGCTGCAGGGGACCACCATCGGCCCG CTGATCCGGCTGGTCGCGCCGCGCGATGCCCATGGGCCGGACGCGCGCCACCTGAGCGGGCCGCAGGCCTGGGCCCGGCT CGCGCGCGCGCAGCTCGCGGCGATCGAGCCGCTGGTGCGCGACGCCGCCGGCAAGGTCGTGCATCCGCGCCTGCTCGAGC AGTACACCTACCGCGCGGCGATGGCCGAGCGCTTCGAGCACGCCGCCGCGTTCCCGGCGCAGGACGTCCACGCGCACTAC GACGTGGTGCTCGCGGCGGTCTCGGCCGGGCGTGCCGAGATGCTGAAGATGCACCGCGGCGGGCTGATCCACGACGAGAT CCTGCATGAGCTGGAACACGACCTCGACCTGCAGGAAGTCACGGCGCGCCACGCCATGGAATGA
Upstream 100 bases:
>100_bases GGGTGCGCCCCGCCCCGCCGGCGCTTATCACCGTGGCGCGACGCGTTGTGGTGTAATCGCGCGGCCGCAAGCCGCCATTC ATCCGCGTGAGGGAGTGCCC
Downstream 100 bases:
>100_bases GCGGCGCGGCGGCGCCGGTTGCGCCGCCTGCAGCGCGCGCCCCGATCTCCTACAATCGAACCCATCGCCCGCCGCGCCGC GCGCCTCTGGCCTCGCTTCC
Product: Na+/H+ antiporter
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 527; Mature: 526
Protein sequence:
>527_residues MSAVSVFKLVLLSFAAIVVLELVAKKLRLPPAAALLVGGAGIAFVPGLPPVNLDPDLVLIVFLPPLLVDGAYFSVWEEFK RNLGGIMLLAIGAVVFTTLAVGVAVHWAVPALPWAACFTLGAIVSPPDAVAAKAVLERVALPRRLMVLLEGESLLNDAAG LVLFRFAVAAALTGAFSFEGAVVRFAELALGGVAVGFIIGWLLIRFIRLLSDEYLIVTTAVLGGWVSYIAGETLEVSGLI SAVTMGMMLGWHQHEVFSATVRVRSTAFWQIMVFLLEALVFVLIGLSLRGVMLRLGGFGAVFATMTPALLAVLAAVIGSR FVWVFAVEALKLPRRWLGHAQPRADWRAATVMSWAGMRGVVTLAIALSLPEAMPGRDMILVAAFAVILVTVLLQGTTIGP LIRLVAPRDAHGPDARHLSGPQAWARLARAQLAAIEPLVRDAAGKVVHPRLLEQYTYRAAMAERFEHAAAFPAQDVHAHY DVVLAAVSAGRAEMLKMHRGGLIHDEILHELEHDLDLQEVTARHAME
Sequences:
>Translated_527_residues MSAVSVFKLVLLSFAAIVVLELVAKKLRLPPAAALLVGGAGIAFVPGLPPVNLDPDLVLIVFLPPLLVDGAYFSVWEEFK RNLGGIMLLAIGAVVFTTLAVGVAVHWAVPALPWAACFTLGAIVSPPDAVAAKAVLERVALPRRLMVLLEGESLLNDAAG LVLFRFAVAAALTGAFSFEGAVVRFAELALGGVAVGFIIGWLLIRFIRLLSDEYLIVTTAVLGGWVSYIAGETLEVSGLI SAVTMGMMLGWHQHEVFSATVRVRSTAFWQIMVFLLEALVFVLIGLSLRGVMLRLGGFGAVFATMTPALLAVLAAVIGSR FVWVFAVEALKLPRRWLGHAQPRADWRAATVMSWAGMRGVVTLAIALSLPEAMPGRDMILVAAFAVILVTVLLQGTTIGP LIRLVAPRDAHGPDARHLSGPQAWARLARAQLAAIEPLVRDAAGKVVHPRLLEQYTYRAAMAERFEHAAAFPAQDVHAHY DVVLAAVSAGRAEMLKMHRGGLIHDEILHELEHDLDLQEVTARHAME >Mature_526_residues SAVSVFKLVLLSFAAIVVLELVAKKLRLPPAAALLVGGAGIAFVPGLPPVNLDPDLVLIVFLPPLLVDGAYFSVWEEFKR NLGGIMLLAIGAVVFTTLAVGVAVHWAVPALPWAACFTLGAIVSPPDAVAAKAVLERVALPRRLMVLLEGESLLNDAAGL VLFRFAVAAALTGAFSFEGAVVRFAELALGGVAVGFIIGWLLIRFIRLLSDEYLIVTTAVLGGWVSYIAGETLEVSGLIS AVTMGMMLGWHQHEVFSATVRVRSTAFWQIMVFLLEALVFVLIGLSLRGVMLRLGGFGAVFATMTPALLAVLAAVIGSRF VWVFAVEALKLPRRWLGHAQPRADWRAATVMSWAGMRGVVTLAIALSLPEAMPGRDMILVAAFAVILVTVLLQGTTIGPL IRLVAPRDAHGPDARHLSGPQAWARLARAQLAAIEPLVRDAAGKVVHPRLLEQYTYRAAMAERFEHAAAFPAQDVHAHYD VVLAAVSAGRAEMLKMHRGGLIHDEILHELEHDLDLQEVTARHAME
Specific function: Transporter involved in the efflux of sodium, potassium, lithium and rubidium [H]
COG id: COG0025
COG function: function code P; NhaP-type Na+/H+ and K+/H+ antiporters
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the monovalent cation:proton antiporter 1 (CPA1) transporter (TC 2.A.36) family. Nhak (TC 2.A.36.3.2) subfamily [H]
Homologues:
Organism=Homo sapiens, GI148727259, Length=469, Percent_Identity=25.3731343283582, Blast_Score=123, Evalue=4e-28, Organism=Homo sapiens, GI15529998, Length=394, Percent_Identity=24.1116751269036, Blast_Score=108, Evalue=1e-23, Organism=Homo sapiens, GI27734935, Length=414, Percent_Identity=23.1884057971014, Blast_Score=107, Evalue=2e-23, Organism=Homo sapiens, GI41872703, Length=430, Percent_Identity=23.953488372093, Blast_Score=101, Evalue=2e-21, Organism=Homo sapiens, GI294997330, Length=408, Percent_Identity=23.2843137254902, Blast_Score=93, Evalue=7e-19, Organism=Homo sapiens, GI110227626, Length=408, Percent_Identity=23.2843137254902, Blast_Score=92, Evalue=1e-18, Organism=Homo sapiens, GI5454070, Length=405, Percent_Identity=23.2098765432099, Blast_Score=91, Evalue=2e-18, Organism=Homo sapiens, GI194239733, Length=428, Percent_Identity=23.8317757009346, Blast_Score=91, Evalue=3e-18, Organism=Homo sapiens, GI14211919, Length=375, Percent_Identity=23.2, Blast_Score=89, Evalue=7e-18, Organism=Homo sapiens, GI27777632, Length=411, Percent_Identity=25.0608272506083, Blast_Score=87, Evalue=4e-17, Organism=Homo sapiens, GI4759144, Length=380, Percent_Identity=25.7894736842105, Blast_Score=85, Evalue=2e-16, Organism=Escherichia coli, GI1790501, Length=510, Percent_Identity=30.1960784313725, Blast_Score=167, Evalue=1e-42, Organism=Caenorhabditis elegans, GI71980847, Length=405, Percent_Identity=22.7160493827161, Blast_Score=114, Evalue=2e-25, Organism=Caenorhabditis elegans, GI71990932, Length=429, Percent_Identity=22.6107226107226, Blast_Score=104, Evalue=1e-22, Organism=Caenorhabditis elegans, GI71990924, Length=429, Percent_Identity=22.6107226107226, Blast_Score=104, Evalue=1e-22, Organism=Caenorhabditis elegans, GI71999817, Length=457, Percent_Identity=22.5382932166302, Blast_Score=103, Evalue=3e-22, Organism=Caenorhabditis elegans, GI71999819, Length=457, Percent_Identity=22.5382932166302, Blast_Score=103, Evalue=3e-22, Organism=Caenorhabditis elegans, GI71999821, Length=457, Percent_Identity=22.5382932166302, Blast_Score=102, Evalue=5e-22, Organism=Caenorhabditis elegans, GI25147678, Length=503, Percent_Identity=22.4652087475149, Blast_Score=97, Evalue=3e-20, Organism=Caenorhabditis elegans, GI71987535, Length=485, Percent_Identity=19.3814432989691, Blast_Score=94, Evalue=2e-19, Organism=Caenorhabditis elegans, GI71992101, Length=379, Percent_Identity=24.0105540897098, Blast_Score=94, Evalue=2e-19, Organism=Caenorhabditis elegans, GI71992107, Length=379, Percent_Identity=24.0105540897098, Blast_Score=94, Evalue=2e-19, Organism=Caenorhabditis elegans, GI71987537, Length=485, Percent_Identity=19.3814432989691, Blast_Score=93, Evalue=3e-19, Organism=Caenorhabditis elegans, GI25150332, Length=402, Percent_Identity=22.8855721393035, Blast_Score=87, Evalue=3e-17, Organism=Caenorhabditis elegans, GI71987559, Length=438, Percent_Identity=20.5479452054795, Blast_Score=83, Evalue=4e-16, Organism=Caenorhabditis elegans, GI71993590, Length=429, Percent_Identity=24.7086247086247, Blast_Score=82, Evalue=6e-16, Organism=Caenorhabditis elegans, GI71987545, Length=438, Percent_Identity=20.5479452054795, Blast_Score=82, Evalue=1e-15, Organism=Caenorhabditis elegans, GI71993582, Length=429, Percent_Identity=24.7086247086247, Blast_Score=81, Evalue=1e-15, Organism=Saccharomyces cerevisiae, GI6320663, Length=346, Percent_Identity=24.2774566473988, Blast_Score=78, Evalue=3e-15, Organism=Drosophila melanogaster, GI221510734, Length=421, Percent_Identity=24.9406175771971, Blast_Score=108, Evalue=1e-23, Organism=Drosophila melanogaster, GI221510738, Length=381, Percent_Identity=25.9842519685039, Blast_Score=107, Evalue=1e-23, Organism=Drosophila melanogaster, GI221510736, Length=381, Percent_Identity=25.9842519685039, Blast_Score=103, Evalue=2e-22, Organism=Drosophila melanogaster, GI221510732, Length=381, Percent_Identity=25.9842519685039, Blast_Score=103, Evalue=2e-22, Organism=Drosophila melanogaster, GI24585580, Length=381, Percent_Identity=25.9842519685039, Blast_Score=103, Evalue=3e-22, Organism=Drosophila melanogaster, GI24585578, Length=381, Percent_Identity=25.9842519685039, Blast_Score=103, Evalue=3e-22, Organism=Drosophila melanogaster, GI221510740, Length=381, Percent_Identity=25.9842519685039, Blast_Score=103, Evalue=3e-22, Organism=Drosophila melanogaster, GI221473212, Length=363, Percent_Identity=25.068870523416, Blast_Score=97, Evalue=2e-20, Organism=Drosophila melanogaster, GI281364513, Length=363, Percent_Identity=25.068870523416, Blast_Score=97, Evalue=2e-20, Organism=Drosophila melanogaster, GI221473222, Length=363, Percent_Identity=25.068870523416, Blast_Score=97, Evalue=2e-20, Organism=Drosophila melanogaster, GI221473215, Length=363, Percent_Identity=25.068870523416, Blast_Score=97, Evalue=2e-20, Organism=Drosophila melanogaster, GI281360447, Length=369, Percent_Identity=22.2222222222222, Blast_Score=91, Evalue=2e-18,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006153 - InterPro: IPR018422 - InterPro: IPR018417 - InterPro: IPR004705 - InterPro: IPR002014 [H]
Pfam domain/function: PF00999 Na_H_Exchanger [H]
EC number: NA
Molecular weight: Translated: 56479; Mature: 56348
Theoretical pI: Translated: 7.56; Mature: 7.56
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSAVSVFKLVLLSFAAIVVLELVAKKLRLPPAAALLVGGAGIAFVPGLPPVNLDPDLVLI CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCEEECCCCCCCCCCCCEEEH VFLPPLLVDGAYFSVWEEFKRNLGGIMLLAIGAVVFTTLAVGVAVHWAVPALPWAACFTL EEHHHHHHCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GAIVSPPDAVAAKAVLERVALPRRLMVLLEGESLLNDAAGLVLFRFAVAAALTGAFSFEG HCCCCCHHHHHHHHHHHHHCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCH AVVRFAELALGGVAVGFIIGWLLIRFIRLLSDEYLIVTTAVLGGWVSYIAGETLEVSGLI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCEEHHHHH SAVTMGMMLGWHQHEVFSATVRVRSTAFWQIMVFLLEALVFVLIGLSLRGVMLRLGGFGA HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH VFATMTPALLAVLAAVIGSRFVWVFAVEALKLPRRWLGHAQPRADWRAATVMSWAGMRGV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCCCCHHHHHHHHHHCHHHH VTLAIALSLPEAMPGRDMILVAAFAVILVTVLLQGTTIGPLIRLVAPRDAHGPDARHLSG HHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCCCCCCCCCC PQAWARLARAQLAAIEPLVRDAAGKVVHPRLLEQYTYRAAMAERFEHAAAFPAQDVHAHY HHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH DVVLAAVSAGRAEMLKMHRGGLIHDEILHELEHDLDLQEVTARHAME HHHHHHHHCCHHHHHHHHCCCCCHHHHHHHHHHCCCHHHHHHHHCCC >Mature Secondary Structure SAVSVFKLVLLSFAAIVVLELVAKKLRLPPAAALLVGGAGIAFVPGLPPVNLDPDLVLI CHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCEEECCCCCCCCCCCCEEEH VFLPPLLVDGAYFSVWEEFKRNLGGIMLLAIGAVVFTTLAVGVAVHWAVPALPWAACFTL EEHHHHHHCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GAIVSPPDAVAAKAVLERVALPRRLMVLLEGESLLNDAAGLVLFRFAVAAALTGAFSFEG HCCCCCHHHHHHHHHHHHHCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCH AVVRFAELALGGVAVGFIIGWLLIRFIRLLSDEYLIVTTAVLGGWVSYIAGETLEVSGLI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCEEHHHHH SAVTMGMMLGWHQHEVFSATVRVRSTAFWQIMVFLLEALVFVLIGLSLRGVMLRLGGFGA HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH VFATMTPALLAVLAAVIGSRFVWVFAVEALKLPRRWLGHAQPRADWRAATVMSWAGMRGV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCCCCHHHHHHHHHHCHHHH VTLAIALSLPEAMPGRDMILVAAFAVILVTVLLQGTTIGPLIRLVAPRDAHGPDARHLSG HHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCCCCCCCCCC PQAWARLARAQLAAIEPLVRDAAGKVVHPRLLEQYTYRAAMAERFEHAAAFPAQDVHAHY HHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH DVVLAAVSAGRAEMLKMHRGGLIHDEILHELEHDLDLQEVTARHAME HHHHHHHHCCHHHHHHHHCCCCCHHHHHHHHHHCCCHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA