Definition | Burkholderia glumae BGR1 chromosome chromosome 2, complete sequence. |
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Accession | NC_012721 |
Length | 2,827,333 |
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The map label for this gene is wcaJ [H]
Identifier: 238024996
GI number: 238024996
Start: 2076586
End: 2077962
Strand: Reverse
Name: wcaJ [H]
Synonym: bglu_2g16530
Alternate gene names: 238024996
Gene position: 2077962-2076586 (Counterclockwise)
Preceding gene: 238024998
Following gene: 238024995
Centisome position: 73.5
GC content: 65.87
Gene sequence:
>1377_bases ATGTTGAGCGTGTTGGCGAGAGTGATCGATATCGCGATGGCGGTGGCCGGTGCGCTCGTCGCGGCCGGGCTGCACCGCGG CGGCATCGTGGCGCTCGACGATCTGCAGCGGTCGATGGTGCTGTTCAACGGCATGCTGATCGTCGCGTTCTTCCCGGCCT TCGGCATCTACCAGTCGTGGCGCGGCAAGCCGCTGCGCTCGCTGCTGTGTCGCGTGGCGGTGGCCTGGCTGGCGGTGGAG ACGGCCGGGATCCTGATGAGCTTCAGCTTTCACCACTCCGGCGCGCTGTCGCGGCTCTGGCTCGGCTACTGGGCGTTGGT GACGGCCGCGCTGCTGGTGGCTTCGAAGGCGTTGGTCCACTGGGTGCTGCGGCGGCTGCGCCGCGAGGGCTACAACCACA AGGTGGTGGGACTCGTCGGCGACACCAGCGTCACGCGCCGCCTGATCGCGCAGATGCGCGCGCGCCCCGAAGCCGGCTTC ACGCCGTCGTGCATCTTCGACGTGACCGGCCAGGTGGGCACGCGCGAGTTCGACGGCGTGCCGGTGGAGCGGCGCTTCTC CGAGCTGGTGCGGCTGGTGCGCGGCCGCTACCTGCGCGAGCTGTGGCTGACGCTGCCGATCACCGAGGAGCGTCAGATCC ACCGGATCGTGAAGGAGTTCCAGCATGATTTCGTCAATATCCGCCTGATTCCCGACGTGCGCAGCCTGTCGTTCTTCAAC CAGGAGGTGGTCGAGCTGCTCGGCGTGCCCGCCATCAATCTGGCCGCCTCGCCGATCACCGACGTTCGCATCCTGCCGAA ATTCGTGTTCGACCGGATGTTTGCGCTGGTCGCGCTGACCCTGCTCTCGCCGTTGATGCTGCTGATCGCCGTGCTCATCA AGCTGACCTCGCCCGGGCCGGTGTTCTTCCGCCAGACCCGCAAGGGCATCGACGGCCACGAGTTCCGGATCTACAAGTTC CGCTCGATGAAGGTGCATGCCGAGGCCAAGGGGCAGGTCACGCAGGCGCGCAAGAACGATTCCCGCGTCACGCCGATCGG CCGCTTCCTGCGGCGCACCAGCCTCGACGAGCTGCCGCAGTTCATCAACGTGCTGAAGGGCGAGATGTCGGTGGTCGGCC CGCGTCCGCACGCGCTCGAACACGACGACATCTACAAGGATCTGGTGCGCGGCTACATGTTCCGCTACCGGATCAAGCCC GGCATCACGGGTTGGGCGCAGATCAACGGCTTTCGCGGCGAGACCGACCGCGTCGAGAAGATGTCCGGCCGCGTCAAGCT CGATCTCTACTACATGCAGAACTGGTCGTTCTGGCTCGACATCAAGATCGTCGCGCTGACGCTCTGGAAAGGCTTTACCG GCAGCAATGCCTACTGA
Upstream 100 bases:
>100_bases ATTTTCTTGCCGCTTCAATAGGGCCTGCAGCAGACGAACCGGCCCCCGAATGGTGCCGTGCCGCTGCGATCCGACCATCT GTCAGGCGAAGGAGCGACCC
Downstream 100 bases:
>100_bases GCGCGGCGCGCCGCTCCTTCTCATTTTCCGATTGACCGATCAACGAGTGGCGGCCGGCAGCGGCCGCAAGGGCTGACAAA TGAACCTGACCATCATCGGC
Product: Undecaprenyl-phosphate glucose phosphotransferase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 458; Mature: 458
Protein sequence:
>458_residues MLSVLARVIDIAMAVAGALVAAGLHRGGIVALDDLQRSMVLFNGMLIVAFFPAFGIYQSWRGKPLRSLLCRVAVAWLAVE TAGILMSFSFHHSGALSRLWLGYWALVTAALLVASKALVHWVLRRLRREGYNHKVVGLVGDTSVTRRLIAQMRARPEAGF TPSCIFDVTGQVGTREFDGVPVERRFSELVRLVRGRYLRELWLTLPITEERQIHRIVKEFQHDFVNIRLIPDVRSLSFFN QEVVELLGVPAINLAASPITDVRILPKFVFDRMFALVALTLLSPLMLLIAVLIKLTSPGPVFFRQTRKGIDGHEFRIYKF RSMKVHAEAKGQVTQARKNDSRVTPIGRFLRRTSLDELPQFINVLKGEMSVVGPRPHALEHDDIYKDLVRGYMFRYRIKP GITGWAQINGFRGETDRVEKMSGRVKLDLYYMQNWSFWLDIKIVALTLWKGFTGSNAY
Sequences:
>Translated_458_residues MLSVLARVIDIAMAVAGALVAAGLHRGGIVALDDLQRSMVLFNGMLIVAFFPAFGIYQSWRGKPLRSLLCRVAVAWLAVE TAGILMSFSFHHSGALSRLWLGYWALVTAALLVASKALVHWVLRRLRREGYNHKVVGLVGDTSVTRRLIAQMRARPEAGF TPSCIFDVTGQVGTREFDGVPVERRFSELVRLVRGRYLRELWLTLPITEERQIHRIVKEFQHDFVNIRLIPDVRSLSFFN QEVVELLGVPAINLAASPITDVRILPKFVFDRMFALVALTLLSPLMLLIAVLIKLTSPGPVFFRQTRKGIDGHEFRIYKF RSMKVHAEAKGQVTQARKNDSRVTPIGRFLRRTSLDELPQFINVLKGEMSVVGPRPHALEHDDIYKDLVRGYMFRYRIKP GITGWAQINGFRGETDRVEKMSGRVKLDLYYMQNWSFWLDIKIVALTLWKGFTGSNAY >Mature_458_residues MLSVLARVIDIAMAVAGALVAAGLHRGGIVALDDLQRSMVLFNGMLIVAFFPAFGIYQSWRGKPLRSLLCRVAVAWLAVE TAGILMSFSFHHSGALSRLWLGYWALVTAALLVASKALVHWVLRRLRREGYNHKVVGLVGDTSVTRRLIAQMRARPEAGF TPSCIFDVTGQVGTREFDGVPVERRFSELVRLVRGRYLRELWLTLPITEERQIHRIVKEFQHDFVNIRLIPDVRSLSFFN QEVVELLGVPAINLAASPITDVRILPKFVFDRMFALVALTLLSPLMLLIAVLIKLTSPGPVFFRQTRKGIDGHEFRIYKF RSMKVHAEAKGQVTQARKNDSRVTPIGRFLRRTSLDELPQFINVLKGEMSVVGPRPHALEHDDIYKDLVRGYMFRYRIKP GITGWAQINGFRGETDRVEKMSGRVKLDLYYMQNWSFWLDIKIVALTLWKGFTGSNAY
Specific function: Slime polysaccharide colanic acid biosynthesis. [C]
COG id: COG2148
COG function: function code M; Sugar transferases involved in lipopolysaccharide synthesis
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the bacterial sugar transferase family [H]
Homologues:
Organism=Escherichia coli, GI1788360, Length=468, Percent_Identity=38.2478632478632, Blast_Score=307, Evalue=8e-85,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003362 - InterPro: IPR017475 - InterPro: IPR017473 [H]
Pfam domain/function: PF02397 Bac_transf [H]
EC number: NA
Molecular weight: Translated: 52021; Mature: 52021
Theoretical pI: Translated: 10.93; Mature: 10.93
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLSVLARVIDIAMAVAGALVAAGLHRGGIVALDDLQRSMVLFNGMLIVAFFPAFGIYQSW CHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHCCHHHHHHHHHHHHHHHC RGKPLRSLLCRVAVAWLAVETAGILMSFSFHHSGALSRLWLGYWALVTAALLVASKALVH CCCHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH WVLRRLRREGYNHKVVGLVGDTSVTRRLIAQMRARPEAGFTPSCIFDVTGQVGTREFDGV HHHHHHHHCCCCCEEEEEECCHHHHHHHHHHHHCCCCCCCCCCEEEECCCCCCCCCCCCC PVERRFSELVRLVRGRYLRELWLTLPITEERQIHRIVKEFQHDFVNIRLIPDVRSLSFFN CHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCEEEEECCCHHHHHHHH QEVVELLGVPAINLAASPITDVRILPKFVFDRMFALVALTLLSPLMLLIAVLIKLTSPGP HHHHHHHCCCCHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC VFFRQTRKGIDGHEFRIYKFRSMKVHAEAKGQVTQARKNDSRVTPIGRFLRRTSLDELPQ HHHHHHHCCCCCCEEEEEEEEEEEEECCCCCCHHHHHCCCCCCCHHHHHHHHCCHHHHHH FINVLKGEMSVVGPRPHALEHDDIYKDLVRGYMFRYRIKPGITGWAQINGFRGETDRVEK HHHHHCCCHHEECCCCCCCCHHHHHHHHHHHHHEEEEECCCCCCHHEECCCCCCHHHHHH MSGRVKLDLYYMQNWSFWLDIKIVALTLWKGFTGSNAY HCCCEEEEEEEEECCCEEEEHEEEEEHHHCCCCCCCCC >Mature Secondary Structure MLSVLARVIDIAMAVAGALVAAGLHRGGIVALDDLQRSMVLFNGMLIVAFFPAFGIYQSW CHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHCCHHHHHHHHHHHHHHHC RGKPLRSLLCRVAVAWLAVETAGILMSFSFHHSGALSRLWLGYWALVTAALLVASKALVH CCCHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH WVLRRLRREGYNHKVVGLVGDTSVTRRLIAQMRARPEAGFTPSCIFDVTGQVGTREFDGV HHHHHHHHCCCCCEEEEEECCHHHHHHHHHHHHCCCCCCCCCCEEEECCCCCCCCCCCCC PVERRFSELVRLVRGRYLRELWLTLPITEERQIHRIVKEFQHDFVNIRLIPDVRSLSFFN CHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCEEEEECCCHHHHHHHH QEVVELLGVPAINLAASPITDVRILPKFVFDRMFALVALTLLSPLMLLIAVLIKLTSPGP HHHHHHHCCCCHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC VFFRQTRKGIDGHEFRIYKFRSMKVHAEAKGQVTQARKNDSRVTPIGRFLRRTSLDELPQ HHHHHHHCCCCCCEEEEEEEEEEEEECCCCCCHHHHHCCCCCCCHHHHHHHHCCHHHHHH FINVLKGEMSVVGPRPHALEHDDIYKDLVRGYMFRYRIKPGITGWAQINGFRGETDRVEK HHHHHCCCHHEECCCCCCCCHHHHHHHHHHHHHEEEEECCCCCCHHEECCCCCCHHHHHH MSGRVKLDLYYMQNWSFWLDIKIVALTLWKGFTGSNAY HCCCEEEEEEEEECCCEEEEHEEEEEHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8759852; 9097040; 9278503 [H]