Definition Burkholderia glumae BGR1 chromosome chromosome 2, complete sequence.
Accession NC_012721
Length 2,827,333

Click here to switch to the map view.

The map label for this gene is sseA [H]

Identifier: 238024943

GI number: 238024943

Start: 2018284

End: 2019153

Strand: Direct

Name: sseA [H]

Synonym: bglu_2g15980

Alternate gene names: 238024943

Gene position: 2018284-2019153 (Clockwise)

Preceding gene: 238024942

Following gene: 238024947

Centisome position: 71.38

GC content: 70.92

Gene sequence:

>870_bases
ATGTCCCACACGCATTACACGACGCTCATCTCCGCCGACAATCTGGCGGAACGTCTCGCCGCCGCGCCGGACAGCCTGAT
CGTGTTCGATTGCCGCTTCGACCTGACCGATCCCGACGCCGGCGCGCAAGCCTACGCGGCCGGCCATCTGCCCGGCGCGC
GCTATCTGCACCTCGATCGCGATCTGTCCGGCCCGAAAACGGGCAGCAACGGCCGCCATCCGCTGCCCGCGCGCGAGACG
CTGGTCGCCACGCTCGCCGCGAAGGGCCTGCGCGCGAACCAGCAGGTGGTAGCCTACGACGCCCAAGGCGGCATTTACGC
GGCGCGGCTGTGGTGGCTGCTGCGCTGGCTCGGCCACGACTCGGTGGCGGTGCTCGACGGCGGCCTGCAGGCGTGGCAGG
CGGCGGGCGGCACGCTCACGCGCGACATGCCGGCCGAACGCGCCGGCGATTTCCGCGCGCAACCGCCGCTCGCCACCGTG
GTCGACGCGGCGGCCGTGGTCGCCAATCTGGCATCGAAAGCGCGGCTGGTGGTGGACGCGCGCGCCGCGGACCGCTACCG
CGGCGAGAACGAGACGCTCGACCGCATCGGCGGCCACATCCCCGGCGCCGTGAACCGCTTCTTCAAGGACAATCTGAATC
CGGAGGGCCGCTTCAAGAGCGGCCATCAACTGCGTGACGAATGGATCAGCGTGATCGGCGAGCAGCCCGCCAACAACGTG
ATCCTGCAGTGCGGCTCGGGCGTGACGGCCTGCCATAACGCGCTGGCCATGGAGATCGCCGGGCTCCACAACCCGCTGCT
CTACGCGGGCTCGTGGAGCGAATGGAGCGCGGACCCGTCGCGGCCGATCGCGACCGGCCCGACCCGCTGA

Upstream 100 bases:

>100_bases
GGCCGGCATCGCGGCGGCACAATCCGCAAAAGACAGGCTTCGGCCTGTCTTTTTTTGTTTAGACTTGTTGGTTCCGGCCC
GTTTCCCCGCAGGAGCTACC

Downstream 100 bases:

>100_bases
TCCGCAGGCCCGGCGTCACATGACGCCGTACTTGTGGAACCACGCGAGCGCGCGCCTCCAGCCGTCCTCGGCATCGGCCT
TCACGTAGCTCGGCCGGTAG

Product: Rhodanese domain-containing protein

Products: NA

Alternate protein names: MST; Rhodanese-like protein [H]

Number of amino acids: Translated: 289; Mature: 288

Protein sequence:

>289_residues
MSHTHYTTLISADNLAERLAAAPDSLIVFDCRFDLTDPDAGAQAYAAGHLPGARYLHLDRDLSGPKTGSNGRHPLPARET
LVATLAAKGLRANQQVVAYDAQGGIYAARLWWLLRWLGHDSVAVLDGGLQAWQAAGGTLTRDMPAERAGDFRAQPPLATV
VDAAAVVANLASKARLVVDARAADRYRGENETLDRIGGHIPGAVNRFFKDNLNPEGRFKSGHQLRDEWISVIGEQPANNV
ILQCGSGVTACHNALAMEIAGLHNPLLYAGSWSEWSADPSRPIATGPTR

Sequences:

>Translated_289_residues
MSHTHYTTLISADNLAERLAAAPDSLIVFDCRFDLTDPDAGAQAYAAGHLPGARYLHLDRDLSGPKTGSNGRHPLPARET
LVATLAAKGLRANQQVVAYDAQGGIYAARLWWLLRWLGHDSVAVLDGGLQAWQAAGGTLTRDMPAERAGDFRAQPPLATV
VDAAAVVANLASKARLVVDARAADRYRGENETLDRIGGHIPGAVNRFFKDNLNPEGRFKSGHQLRDEWISVIGEQPANNV
ILQCGSGVTACHNALAMEIAGLHNPLLYAGSWSEWSADPSRPIATGPTR
>Mature_288_residues
SHTHYTTLISADNLAERLAAAPDSLIVFDCRFDLTDPDAGAQAYAAGHLPGARYLHLDRDLSGPKTGSNGRHPLPARETL
VATLAAKGLRANQQVVAYDAQGGIYAARLWWLLRWLGHDSVAVLDGGLQAWQAAGGTLTRDMPAERAGDFRAQPPLATVV
DAAAVVANLASKARLVVDARAADRYRGENETLDRIGGHIPGAVNRFFKDNLNPEGRFKSGHQLRDEWISVIGEQPANNVI
LQCGSGVTACHNALAMEIAGLHNPLLYAGSWSEWSADPSRPIATGPTR

Specific function: Transfers a sulfur ion to cyanide or to other thiol compounds [H]

COG id: COG2897

COG function: function code P; Rhodanese-related sulfurtransferase

Gene ontology:

Cell location: Cytoplasm (Probable) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 rhodanese domains [H]

Homologues:

Organism=Homo sapiens, GI61835204, Length=294, Percent_Identity=36.3945578231293, Blast_Score=130, Evalue=1e-30,
Organism=Homo sapiens, GI194473681, Length=294, Percent_Identity=36.3945578231293, Blast_Score=130, Evalue=1e-30,
Organism=Homo sapiens, GI194473668, Length=294, Percent_Identity=36.3945578231293, Blast_Score=130, Evalue=1e-30,
Organism=Homo sapiens, GI17402865, Length=296, Percent_Identity=32.0945945945946, Blast_Score=125, Evalue=4e-29,
Organism=Escherichia coli, GI87082121, Length=247, Percent_Identity=32.7935222672065, Blast_Score=107, Evalue=6e-25,
Organism=Escherichia coli, GI87081967, Length=258, Percent_Identity=28.2945736434109, Blast_Score=80, Evalue=1e-16,
Organism=Caenorhabditis elegans, GI17561888, Length=254, Percent_Identity=27.5590551181102, Blast_Score=87, Evalue=7e-18,
Organism=Caenorhabditis elegans, GI71997283, Length=257, Percent_Identity=26.8482490272374, Blast_Score=86, Evalue=2e-17,

Paralogues:

None

Copy number: 20 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001763 [H]

Pfam domain/function: PF00581 Rhodanese [H]

EC number: =2.8.1.2 [H]

Molecular weight: Translated: 30966; Mature: 30835

Theoretical pI: Translated: 6.86; Mature: 6.86

Prosite motif: PS00380 RHODANESE_1 ; PS50206 RHODANESE_3

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSHTHYTTLISADNLAERLAAAPDSLIVFDCRFDLTDPDAGAQAYAAGHLPGARYLHLDR
CCCCEEEEEEEHHHHHHHHHCCCCCEEEEEEEECCCCCCCCCCCEECCCCCCCEEEEECC
DLSGPKTGSNGRHPLPARETLVATLAAKGLRANQQVVAYDAQGGIYAARLWWLLRWLGHD
CCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCEEEEEECCCCCHHHHHHHHHHHHCCC
SVAVLDGGLQAWQAAGGTLTRDMPAERAGDFRAQPPLATVVDAAAVVANLASKARLVVDA
CEEEECCCHHHHHHCCCCCCCCCCHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHEEEEEC
RAADRYRGENETLDRIGGHIPGAVNRFFKDNLNPEGRFKSGHQLRDEWISVIGEQPANNV
HHHHHHCCCCCHHHHHCCCCCHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCE
ILQCGSGVTACHNALAMEIAGLHNPLLYAGSWSEWSADPSRPIATGPTR
EEECCCCHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
SHTHYTTLISADNLAERLAAAPDSLIVFDCRFDLTDPDAGAQAYAAGHLPGARYLHLDR
CCCEEEEEEEHHHHHHHHHCCCCCEEEEEEEECCCCCCCCCCCEECCCCCCCEEEEECC
DLSGPKTGSNGRHPLPARETLVATLAAKGLRANQQVVAYDAQGGIYAARLWWLLRWLGHD
CCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCEEEEEECCCCCHHHHHHHHHHHHCCC
SVAVLDGGLQAWQAAGGTLTRDMPAERAGDFRAQPPLATVVDAAAVVANLASKARLVVDA
CEEEECCCHHHHHHCCCCCCCCCCHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHEEEEEC
RAADRYRGENETLDRIGGHIPGAVNRFFKDNLNPEGRFKSGHQLRDEWISVIGEQPANNV
HHHHHHCCCCCHHHHHCCCCCHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCE
ILQCGSGVTACHNALAMEIAGLHNPLLYAGSWSEWSADPSRPIATGPTR
EEECCCCHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10984043 [H]