Definition Burkholderia glumae BGR1 chromosome chromosome 2, complete sequence.
Accession NC_012721
Length 2,827,333

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The map label for this gene is yvrE [H]

Identifier: 238024888

GI number: 238024888

Start: 1940210

End: 1941181

Strand: Reverse

Name: yvrE [H]

Synonym: bglu_2g15310

Alternate gene names: 238024888

Gene position: 1941181-1940210 (Counterclockwise)

Preceding gene: 238024891

Following gene: 238024885

Centisome position: 68.66

GC content: 74.49

Gene sequence:

>972_bases
ATGACCGATACCACCGTTTCCTCCGATCCGAACCGACCCGCCGGCGCGCCGGCCGCCACGCTGCTGGTCGATGCCCGCCA
CGTGCTCGGCGAATGCGCGACCTGGTGCGGGCTCGCCCACGCGTTCTACTGGACCGACATCGAGGGGGCGCGGCTCTGGC
GCCACCGCCCCGGCGCGACCCCCCGGACCGAAAGCTGGCCGATGCCCGAGCGGCTCGGCTGCTTCGCGCTGACCGAGGAG
CGCGACGTGCTGCTGGTGGGGCTCGCCTCGCACCTGGCGCTGTTCGACCTGCGCGACGGCCGCTTCGAGCGCATCGTCGA
GGTCGAGCCGGGGCAGCGCTCGCGCGTGAACGACGGGCGCTGCGACCGCGCCGGCAATCTGGTGTTCGGCATGAAGGACG
AGCACGATCCGCTGCAGGCCACGACCGGCTTCTACCGGCTCAACGCGGACCGTTCGCTCGAACGGCTCGCGCTGCCGCCC
GCGGCGATCGCCAACAGCATCGCGTTCTCGCCCGACGGCGCGCGCATGTACTTCTGCGATACGCTCACGCGACAGATCAT
GGTGTGCGACTACCGCCCCGACGGCCCGGTGGCGAAGGTGCGGCCCTTCGTGGCCCTGGCCGACGCGACGGGCGGCCCGG
ACGGCTCGACCGTCGATGCCGAGGGCGGCCTCTGGAACGCGCAGTGGGGCGGCGCGCGCGTGGTGCGCTACGACCCGAAC
GGCGTGGAGACGGATCGCATCGCGATCCCCACCACGCAGCCGAGCTGCCCGTCGTTCGGCCCGGCGCCCGAGCGCGCCGG
CGAGCCGGCCGACGGCGCCGAGGGCTGGCGCACGCTCTACGTGACGAGCGCGCGCGAGGGCCTCGACGGTGACGCGCTCG
CCGCCGATCCGCACGCGGGCGGCGTGTTCGTCGCGGCCACCGCCTATCGCGGGCTGCCGGAGCCGCGCTTCCCGCTGCGC
GGCGCGCGCTGA

Upstream 100 bases:

>100_bases
CGCGTTTTGCGTTTCGCGGCGCGAGCGTGTATCAGAGCGGAACGGCGGCCGTCGCGGCGATGCGGCGGCCGGCCACGAAC
CGTCACCCGACCGACTACCG

Downstream 100 bases:

>100_bases
GTACGGGCGGGCGCCCCGCGGGCTACGGGCGGCGCCGCGCCGCCGCGAGCCGCCCGCGCAGCAGCGGCAGCGCCACCTCG
CTCCAGAACGGCGGCGAGAC

Product: SMP-30/gluconolaconase/LRE domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 323; Mature: 322

Protein sequence:

>323_residues
MTDTTVSSDPNRPAGAPAATLLVDARHVLGECATWCGLAHAFYWTDIEGARLWRHRPGATPRTESWPMPERLGCFALTEE
RDVLLVGLASHLALFDLRDGRFERIVEVEPGQRSRVNDGRCDRAGNLVFGMKDEHDPLQATTGFYRLNADRSLERLALPP
AAIANSIAFSPDGARMYFCDTLTRQIMVCDYRPDGPVAKVRPFVALADATGGPDGSTVDAEGGLWNAQWGGARVVRYDPN
GVETDRIAIPTTQPSCPSFGPAPERAGEPADGAEGWRTLYVTSAREGLDGDALAADPHAGGVFVAATAYRGLPEPRFPLR
GAR

Sequences:

>Translated_323_residues
MTDTTVSSDPNRPAGAPAATLLVDARHVLGECATWCGLAHAFYWTDIEGARLWRHRPGATPRTESWPMPERLGCFALTEE
RDVLLVGLASHLALFDLRDGRFERIVEVEPGQRSRVNDGRCDRAGNLVFGMKDEHDPLQATTGFYRLNADRSLERLALPP
AAIANSIAFSPDGARMYFCDTLTRQIMVCDYRPDGPVAKVRPFVALADATGGPDGSTVDAEGGLWNAQWGGARVVRYDPN
GVETDRIAIPTTQPSCPSFGPAPERAGEPADGAEGWRTLYVTSAREGLDGDALAADPHAGGVFVAATAYRGLPEPRFPLR
GAR
>Mature_322_residues
TDTTVSSDPNRPAGAPAATLLVDARHVLGECATWCGLAHAFYWTDIEGARLWRHRPGATPRTESWPMPERLGCFALTEER
DVLLVGLASHLALFDLRDGRFERIVEVEPGQRSRVNDGRCDRAGNLVFGMKDEHDPLQATTGFYRLNADRSLERLALPPA
AIANSIAFSPDGARMYFCDTLTRQIMVCDYRPDGPVAKVRPFVALADATGGPDGSTVDAEGGLWNAQWGGARVVRYDPNG
VETDRIAIPTTQPSCPSFGPAPERAGEPADGAEGWRTLYVTSAREGLDGDALAADPHAGGVFVAATAYRGLPEPRFPLRG
AR

Specific function: Unknown

COG id: COG3386

COG function: function code G; Gluconolactonase

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the SMP-30/CGR1 family [H]

Homologues:

Organism=Homo sapiens, GI23111021, Length=198, Percent_Identity=30.8080808080808, Blast_Score=87, Evalue=3e-17,
Organism=Homo sapiens, GI4759036, Length=198, Percent_Identity=30.8080808080808, Blast_Score=87, Evalue=3e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011042
- InterPro:   IPR013658
- InterPro:   IPR005511 [H]

Pfam domain/function: PF08450 SGL [H]

EC number: NA

Molecular weight: Translated: 34885; Mature: 34754

Theoretical pI: Translated: 5.09; Mature: 5.09

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTDTTVSSDPNRPAGAPAATLLVDARHVLGECATWCGLAHAFYWTDIEGARLWRHRPGAT
CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCHHHHHCCCCCC
PRTESWPMPERLGCFALTEERDVLLVGLASHLALFDLRDGRFERIVEVEPGQRSRVNDGR
CCCCCCCCHHHCCEEEECCCCCEEEEEHHHHEEEEECCCCCEEEEEEECCCCCCCCCCCC
CDRAGNLVFGMKDEHDPLQATTGFYRLNADRSLERLALPPAAIANSIAFSPDGARMYFCD
CCCCCCEEEECCCCCCCCHHCCCEEEECCCCCHHHHCCCHHHHHHCEEECCCCCEEEEEE
TLTRQIMVCDYRPDGPVAKVRPFVALADATGGPDGSTVDAEGGLWNAQWGGARVVRYDPN
CCCCEEEEEECCCCCCHHHHCCEEEEECCCCCCCCCEEECCCCEEECCCCCEEEEEECCC
GVETDRIAIPTTQPSCPSFGPAPERAGEPADGAEGWRTLYVTSAREGLDGDALAADPHAG
CCCCCEEEECCCCCCCCCCCCCHHHCCCCCCCCCCEEEEEEEECCCCCCCCCEECCCCCC
GVFVAATAYRGLPEPRFPLRGAR
CEEEEEEHHCCCCCCCCCCCCCC
>Mature Secondary Structure 
TDTTVSSDPNRPAGAPAATLLVDARHVLGECATWCGLAHAFYWTDIEGARLWRHRPGAT
CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCHHHHHCCCCCC
PRTESWPMPERLGCFALTEERDVLLVGLASHLALFDLRDGRFERIVEVEPGQRSRVNDGR
CCCCCCCCHHHCCEEEECCCCCEEEEEHHHHEEEEECCCCCEEEEEEECCCCCCCCCCCC
CDRAGNLVFGMKDEHDPLQATTGFYRLNADRSLERLALPPAAIANSIAFSPDGARMYFCD
CCCCCCEEEECCCCCCCCHHCCCEEEECCCCCHHHHCCCHHHHHHCEEECCCCCEEEEEE
TLTRQIMVCDYRPDGPVAKVRPFVALADATGGPDGSTVDAEGGLWNAQWGGARVVRYDPN
CCCCEEEEEECCCCCCHHHHCCEEEEECCCCCCCCCEEECCCCEEECCCCCEEEEEECCC
GVETDRIAIPTTQPSCPSFGPAPERAGEPADGAEGWRTLYVTSAREGLDGDALAADPHAG
CCCCCEEEECCCCCCCCCCCCCHHHCCCCCCCCCCEEEEEEEECCCCCCCCCEECCCCCC
GVFVAATAYRGLPEPRFPLRGAR
CEEEEEEHHCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9639930; 9384377 [H]