Definition Burkholderia glumae BGR1 chromosome chromosome 2, complete sequence.
Accession NC_012721
Length 2,827,333

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The map label for this gene is 238024885

Identifier: 238024885

GI number: 238024885

Start: 1937279

End: 1938403

Strand: Reverse

Name: 238024885

Synonym: bglu_2g15280

Alternate gene names: NA

Gene position: 1938403-1937279 (Counterclockwise)

Preceding gene: 238024888

Following gene: 238024882

Centisome position: 68.56

GC content: 73.78

Gene sequence:

>1125_bases
ATGACTTCCGTTACCCGCCGGCTCGGCCGCCTGCTCGGGATGGCCGCCGCAAGACGCTCGCGGGCGTGGGCTGCGGCGTC
GCCGCAGCACGACGGCGAGCGCTTTCGCAACCTGCGGCCGCGCCCGGCGGAGGGCGCAGGCAAGAGGTTGTCGATCGCCT
GGAACGTGCTCTTCAAGAAGCCGGGCGGCACGGCGCCGGCCGCCGCGCTGCCGGTGGACGCGCTCACGCGCGCCGGGCTC
GAGGCCGCGCCCGACCGGAGCCTGTTCCGGCTCGGCCACTCGACCCTGCTGCTGAAGCTGCGCGGCCGCTTCTGGCTGAC
CGATCCGGTGTTCGCCGAGCGCGCCTCGCCGTTGCGGCGCTTCGGCCCGAAGCGCTTCCACGCGCCGCCTGTCGCACTGG
CGGACCTGCCGCCGCTGGCCGGCGTGATCCTCTCGCACGACCACTACGATCACCTCGATCGCGACACGGTGCTCGCGCTC
GCGGCCGGCACCGGCGTGTTCCTGACGCCGCTCGGCGTCGGCGACCGGCTGATCGAATGGGGCATTGACGCGGCGAAGGT
GCGCCAGTTCGACTGGTGGCAGGGCACCGAACTGCACGGCGTCGCGTTCACGGCCACGCCCGCGCAGCATTTCTCGGGGC
GCAGCCTGTTCGACGGCGATCGCACGCTGTGGGCCTCGTGGACCATCGTCGAGGGCGGCCTGCGCGTGTTCTTCAGCGGC
GACACCGGCTATTTCGACGGCTTTCGCGAGATCGGCGAGCGCTGCGGCCCGTTCGACGTGACGCTGCTGGAGACGGGCGC
CTACGACGCACAATGGCCCTACGTCCACATGCAGCCCGAGCAGACCGTGCAGGCCCACGTGGACCTGCGCGGCCGCTGGC
TGGTGCCGGTCCACAACGGCACCTTCGATCTGGCGATGCACCGCTGGCAGGAGCCGTTCGAGCGCGTGTTCGGGCTCGCC
GCCGCGCGCGGGATCGCGCTCGCCACGCCGCGCATGGGCGAGCGGCTCGATCTGCAGGCGCCGCATCGCGGCGAGCGCTG
GTGGCGCGCCGTGGCCGACGCGCCGGCGAAGCCCGCGCGCTGGCGCGGCTGGCGCGGCGGCCGCGAGGACGCGTCCGGGG
TGTGA

Upstream 100 bases:

>100_bases
GGGAGCGTGGGAATCCATCGGCAAATTTTATACCGGACGGTTTACTTTTCTCGAAAATAAACTACACTGGAGAGTCTACT
TTTTGCGCCGGACCGATTCG

Downstream 100 bases:

>100_bases
GGCCGCCCGCTGCCTGGGCCGGCTGCGCCGGGCGGTGCGCTGGGCCGATGCGTGCGCGGCATCCGCGATCCGCCGCCGCG
CTCGCGAGCCGTGACGGCGG

Product: zinc-dependent hydrolase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 374; Mature: 373

Protein sequence:

>374_residues
MTSVTRRLGRLLGMAAARRSRAWAAASPQHDGERFRNLRPRPAEGAGKRLSIAWNVLFKKPGGTAPAAALPVDALTRAGL
EAAPDRSLFRLGHSTLLLKLRGRFWLTDPVFAERASPLRRFGPKRFHAPPVALADLPPLAGVILSHDHYDHLDRDTVLAL
AAGTGVFLTPLGVGDRLIEWGIDAAKVRQFDWWQGTELHGVAFTATPAQHFSGRSLFDGDRTLWASWTIVEGGLRVFFSG
DTGYFDGFREIGERCGPFDVTLLETGAYDAQWPYVHMQPEQTVQAHVDLRGRWLVPVHNGTFDLAMHRWQEPFERVFGLA
AARGIALATPRMGERLDLQAPHRGERWWRAVADAPAKPARWRGWRGGREDASGV

Sequences:

>Translated_374_residues
MTSVTRRLGRLLGMAAARRSRAWAAASPQHDGERFRNLRPRPAEGAGKRLSIAWNVLFKKPGGTAPAAALPVDALTRAGL
EAAPDRSLFRLGHSTLLLKLRGRFWLTDPVFAERASPLRRFGPKRFHAPPVALADLPPLAGVILSHDHYDHLDRDTVLAL
AAGTGVFLTPLGVGDRLIEWGIDAAKVRQFDWWQGTELHGVAFTATPAQHFSGRSLFDGDRTLWASWTIVEGGLRVFFSG
DTGYFDGFREIGERCGPFDVTLLETGAYDAQWPYVHMQPEQTVQAHVDLRGRWLVPVHNGTFDLAMHRWQEPFERVFGLA
AARGIALATPRMGERLDLQAPHRGERWWRAVADAPAKPARWRGWRGGREDASGV
>Mature_373_residues
TSVTRRLGRLLGMAAARRSRAWAAASPQHDGERFRNLRPRPAEGAGKRLSIAWNVLFKKPGGTAPAAALPVDALTRAGLE
AAPDRSLFRLGHSTLLLKLRGRFWLTDPVFAERASPLRRFGPKRFHAPPVALADLPPLAGVILSHDHYDHLDRDTVLALA
AGTGVFLTPLGVGDRLIEWGIDAAKVRQFDWWQGTELHGVAFTATPAQHFSGRSLFDGDRTLWASWTIVEGGLRVFFSGD
TGYFDGFREIGERCGPFDVTLLETGAYDAQWPYVHMQPEQTVQAHVDLRGRWLVPVHNGTFDLAMHRWQEPFERVFGLAA
ARGIALATPRMGERLDLQAPHRGERWWRAVADAPAKPARWRGWRGGREDASGV

Specific function: Unknown

COG id: COG2220

COG function: function code R; Predicted Zn-dependent hydrolases of the beta-lactamase fold

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To K.pneumoniae romA [H]

Homologues:

Organism=Homo sapiens, GI170932483, Length=230, Percent_Identity=41.304347826087, Blast_Score=192, Evalue=5e-49,
Organism=Homo sapiens, GI170932481, Length=230, Percent_Identity=41.304347826087, Blast_Score=192, Evalue=5e-49,
Organism=Caenorhabditis elegans, GI17543102, Length=366, Percent_Identity=31.1475409836066, Blast_Score=164, Evalue=9e-41,
Organism=Caenorhabditis elegans, GI17543100, Length=282, Percent_Identity=34.3971631205674, Blast_Score=162, Evalue=4e-40,
Organism=Caenorhabditis elegans, GI25148824, Length=333, Percent_Identity=31.8318318318318, Blast_Score=161, Evalue=6e-40,
Organism=Caenorhabditis elegans, GI17543104, Length=284, Percent_Identity=34.8591549295775, Blast_Score=154, Evalue=6e-38,
Organism=Saccharomyces cerevisiae, GI6325154, Length=258, Percent_Identity=31.3953488372093, Blast_Score=111, Evalue=2e-25,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 41533; Mature: 41402

Theoretical pI: Translated: 10.85; Mature: 10.85

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTSVTRRLGRLLGMAAARRSRAWAAASPQHDGERFRNLRPRPAEGAGKRLSIAWNVLFKK
CCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHCCCCCCCCCCCCEEEEEEEEEEEC
PGGTAPAAALPVDALTRAGLEAAPDRSLFRLGHSTLLLKLRGRFWLTDPVFAERASPLRR
CCCCCCCHHCCHHHHHHCCCCCCCCHHHHHHCCCEEEEEECCCEEECCCHHHHHCCHHHH
FGPKRFHAPPVALADLPPLAGVILSHDHYDHLDRDTVLALAAGTGVFLTPLGVGDRLIEW
CCCCCCCCCCEEHHCCCCHHHHEECCCCCCCCCCCEEEEEEECCCEEEEECCCCHHHHHH
GIDAAKVRQFDWWQGTELHGVAFTATPAQHFSGRSLFDGDRTLWASWTIVEGGLRVFFSG
CCCHHHHEECCCCCCCEECEEEEEECCHHHCCCCCCCCCCCEEEEEEEEEECCEEEEECC
DTGYFDGFREIGERCGPFDVTLLETGAYDAQWPYVHMQPEQTVQAHVDLRGRWLVPVHNG
CCCHHHHHHHHHHHCCCCEEEEEECCCCCCCCCEEEECCHHHHEEEEEECCEEEEEEECC
TFDLAMHRWQEPFERVFGLAAARGIALATPRMGERLDLQAPHRGERWWRAVADAPAKPAR
CHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCC
WRGWRGGREDASGV
CCCCCCCCCCCCCC
>Mature Secondary Structure 
TSVTRRLGRLLGMAAARRSRAWAAASPQHDGERFRNLRPRPAEGAGKRLSIAWNVLFKK
CHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHCCCCCCCCCCCCEEEEEEEEEEEC
PGGTAPAAALPVDALTRAGLEAAPDRSLFRLGHSTLLLKLRGRFWLTDPVFAERASPLRR
CCCCCCCHHCCHHHHHHCCCCCCCCHHHHHHCCCEEEEEECCCEEECCCHHHHHCCHHHH
FGPKRFHAPPVALADLPPLAGVILSHDHYDHLDRDTVLALAAGTGVFLTPLGVGDRLIEW
CCCCCCCCCCEEHHCCCCHHHHEECCCCCCCCCCCEEEEEEECCCEEEEECCCCHHHHHH
GIDAAKVRQFDWWQGTELHGVAFTATPAQHFSGRSLFDGDRTLWASWTIVEGGLRVFFSG
CCCHHHHEECCCCCCCEECEEEEEECCHHHCCCCCCCCCCCEEEEEEEEEECCEEEEECC
DTGYFDGFREIGERCGPFDVTLLETGAYDAQWPYVHMQPEQTVQAHVDLRGRWLVPVHNG
CCCHHHHHHHHHHHCCCCEEEEEECCCCCCCCCEEEECCHHHHEEEEEECCEEEEEEECC
TFDLAMHRWQEPFERVFGLAAARGIALATPRMGERLDLQAPHRGERWWRAVADAPAKPAR
CHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCC
WRGWRGGREDASGV
CCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]