Definition | Burkholderia glumae BGR1 chromosome chromosome 2, complete sequence. |
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Accession | NC_012721 |
Length | 2,827,333 |
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The map label for this gene is 238024743
Identifier: 238024743
GI number: 238024743
Start: 1769512
End: 1770180
Strand: Direct
Name: 238024743
Synonym: bglu_2g13800
Alternate gene names: NA
Gene position: 1769512-1770180 (Clockwise)
Preceding gene: 238024742
Following gene: 238024748
Centisome position: 62.59
GC content: 73.39
Gene sequence:
>669_bases ATGCCGAGCTCAGCGCGCGCGTCGCAATCCGTCCATGCGATCACCAGCCGGGTGCTGACGACCAGCCTGGTCGTCAACCT GCTGCTGATGACCGCGCAGGCCGGTGCCGCCTGCGCCACCCATTCGTCGGGGCTGTTCGCCGATACCATCCACGCGGCGA TCGACCTGATCGCCGACGCGCTGCTGCTGCTCGCCTGCCGGCTCGACGCGAAGCTGCCGCCCGAACAGCGGCCGACCTAC GAGCCGCTCGCGCTGACCGGCCTGGGCATGCTGCTGCTCGCCGCCGGCGCGCAGATGATCTGGCAGGCCGCCACCGGCCT GTCGGCACCGCCCGACATCTCGCCCGACGCGATCTCGTTGGCGGTGCTGGGCATGACGCTGGCCGGCAAGGAATCGCTGT CGCGCTGGATGCTGGGCCGCGCGCGTGCGATCGGCGGCGCCGCGCTGATCGAGGCGAGCGCCTGGCATATCCGCGTCGAC GCGCTGACGCTGCTGCTGGCCACGCTGGCGCTGGCCGGCGCGCGCCTCGGCCTGCCGCGCCTCGACCCGCTCGCGGCCAC GCTGATCGGCGTGATGATCCTGCGCACCGGCTACACGTTCGCGAAGCGCGGCCATCAGCTGCGCGCCGACCACGGCGGCT GGGCCAACCGCGCGACGCCCCCGCGCTGA
Upstream 100 bases:
>100_bases TTGGCTGCGCGCCGGCCCCGTACCCGGCTTGTCATCGGTCTGCCATTTGCCGCCGATACAGTCCGGCTTCGACCTGCAGA ACAGACCACCCCCACGCCCC
Downstream 100 bases:
>100_bases GCGCGCGCGAGCGGGCCTGGTCGCCAGGCCGGCACGCCCGGCAGTCGCCGCGGCGCCTCGCGCAGGAACACTGCGGCATG GGCCACCGGCCTAGGAAGGC
Product: Cation efflux protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 222; Mature: 221
Protein sequence:
>222_residues MPSSARASQSVHAITSRVLTTSLVVNLLLMTAQAGAACATHSSGLFADTIHAAIDLIADALLLLACRLDAKLPPEQRPTY EPLALTGLGMLLLAAGAQMIWQAATGLSAPPDISPDAISLAVLGMTLAGKESLSRWMLGRARAIGGAALIEASAWHIRVD ALTLLLATLALAGARLGLPRLDPLAATLIGVMILRTGYTFAKRGHQLRADHGGWANRATPPR
Sequences:
>Translated_222_residues MPSSARASQSVHAITSRVLTTSLVVNLLLMTAQAGAACATHSSGLFADTIHAAIDLIADALLLLACRLDAKLPPEQRPTY EPLALTGLGMLLLAAGAQMIWQAATGLSAPPDISPDAISLAVLGMTLAGKESLSRWMLGRARAIGGAALIEASAWHIRVD ALTLLLATLALAGARLGLPRLDPLAATLIGVMILRTGYTFAKRGHQLRADHGGWANRATPPR >Mature_221_residues PSSARASQSVHAITSRVLTTSLVVNLLLMTAQAGAACATHSSGLFADTIHAAIDLIADALLLLACRLDAKLPPEQRPTYE PLALTGLGMLLLAAGAQMIWQAATGLSAPPDISPDAISLAVLGMTLAGKESLSRWMLGRARAIGGAALIEASAWHIRVDA LTLLLATLALAGARLGLPRLDPLAATLIGVMILRTGYTFAKRGHQLRADHGGWANRATPPR
Specific function: Unknown
COG id: COG0053
COG function: function code P; Predicted Co/Zn/Cd cation transporters
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23087; Mature: 22956
Theoretical pI: Translated: 10.30; Mature: 10.30
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPSSARASQSVHAITSRVLTTSLVVNLLLMTAQAGAACATHSSGLFADTIHAAIDLIADA CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCCCHHHHHHHHHHHHHHH LLLLACRLDAKLPPEQRPTYEPLALTGLGMLLLAAGAQMIWQAATGLSAPPDISPDAISL HHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHH AVLGMTLAGKESLSRWMLGRARAIGGAALIEASAWHIRVDALTLLLATLALAGARLGLPR HHHHHHHHCHHHHHHHHHHHHHHHCCHHHEECCCCEEHHHHHHHHHHHHHHHHHHCCCCC LDPLAATLIGVMILRTGYTFAKRGHQLRADHGGWANRATPPR CHHHHHHHHHHHHHHCCCHHHHCCCEEECCCCCCCCCCCCCC >Mature Secondary Structure PSSARASQSVHAITSRVLTTSLVVNLLLMTAQAGAACATHSSGLFADTIHAAIDLIADA CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCCCHHHHHHHHHHHHHHH LLLLACRLDAKLPPEQRPTYEPLALTGLGMLLLAAGAQMIWQAATGLSAPPDISPDAISL HHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHH AVLGMTLAGKESLSRWMLGRARAIGGAALIEASAWHIRVDALTLLLATLALAGARLGLPR HHHHHHHHCHHHHHHHHHHHHHHHCCHHHEECCCCEEHHHHHHHHHHHHHHHHHHCCCCC LDPLAATLIGVMILRTGYTFAKRGHQLRADHGGWANRATPPR CHHHHHHHHHHHHHHCCCHHHHCCCEEECCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA