Definition | Burkholderia glumae BGR1 chromosome chromosome 2, complete sequence. |
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Accession | NC_012721 |
Length | 2,827,333 |
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The map label for this gene is 238024742
Identifier: 238024742
GI number: 238024742
Start: 1767479
End: 1769212
Strand: Direct
Name: 238024742
Synonym: bglu_2g13790
Alternate gene names: NA
Gene position: 1767479-1769212 (Clockwise)
Preceding gene: 238024737
Following gene: 238024743
Centisome position: 62.51
GC content: 71.57
Gene sequence:
>1734_bases ATGAAAATCGAGCGTTTCCACCCCGCCAACCTGCGTGCGGGCCAGCTTCGTACCCTGGCCTCCGTCGTTTCGATGACGCT GGTCGCCTCCGTCATAGCCGGTTGCGGCGGCGGCGGCGACTCGGGCTCCCCGGCGAGCACCGCAGCCGGCACCGGCACCT CGACCTCGGGCACGGCCTCCGGCACCTCGGGCACCTCCACCAGTTCCAGCCAGCTCTGCACCACCGCCCTCGCCACCGCG CAGGGCAACGCCAGCAGCACCTCCACCGCGTCCTCGAGCGGCAATACCAACGGCACGCCGAGCCCGGCCACGGTCGGCAC GCCCGATGCGCCCGTCGATCACCTGATCGTGAAGCTCACCTCCGCCTCATCCACCAGCCTCGCGAACGGCGCCCGCGCCC TGGCCGCCAGCTCCGACGCCGCGCGCGTGGGCGACGTGATCAGCCGCGTGCTCACGCAATGGAACGCGCAGCGCCTGCAG GCCCGCGTGCTGGCCTCGACGGCCGCCGCCCCGGCGCTGCCGAGCTTCGACAACGTGCAGCTGGAACGCACCATGTCGGA CGGCGCGGCGGTAGTGTCGCTCGGCAAGCGCGTGACCCCGGCCGACGCGGTCACGCTCGCGCAGGCCTTCGCGGCCGACA GCGAGGTGGCCTACGCCGAGCCGGACCGGCGCCTGTTCGTCAGCACCGTGCCGACCGACCCGAATTACTCGCAGCAGTGG AACGACTTCGATCCGACCGCGGGCGTGAACATGCCCGCTGCCTGGAACCTCAGCACCGGCTCGTCGAGCGTGGTCACCGC GGTGATCGACACCGGCTACCGCCCGCACGCCGACATCTCCGGCAATCTGCTGCCCGGCTACGACTTCATCTCCGACGTGA ACACCGGCAACAACGGCCACGGCCGCAGCTCGGACGCCACCGACCCGGGCGACTGGGTCACGCAGGCCGAGCTCAATGAT TCGTCGGGCCCGTTCTACCACTGCGCGAGCGCGCCCAGCAACAGCACCTGGCACGGCACGGAAGTGGCCGGCCTGATCGG CGCGTCCGCCAACAACGGCATCGGCATCGCCGGCGTGAGCTGGTTCGGCAAGATCCTGCCGGTGCGCGCGCTCGGCAAGT GCGGCGGCACCACCAGCGACATCGCCGACGCGATGCGCTGGGCGGCCGGCATCCCGGTGGCGGGCGTGCCCAACAACACC ACGCCGGCCAAGATCATCAACCTGAGCCTCGGCGGCAGCGGCCCGTGCGGCAGCACGTTCCAGTCGGCAATCAACGACGT GATCGCACGCGGCGTGACGGTGGTGGTGGCGGCCGGCAACGACGGCCTCGCCAACGCGCAGGACCGCCCGGCGAACTGCA CCGGCGTGATCGCGGTGGGCGCCACCGACTCCACCGGCAAGCGTGCCTGGTACAGCAACTTCAGCAGCGAGATCACGCTG AGCGCGCCGGGTTCGAGCATCCTCTCGACGAGCAACACCGGCACCACCACGCCGGGCAGCGACACCTACGCATACAACAG CGGCACCAGCCTCGCCGCGCCGCAGGTGGCCGGCGTGGCCGCGCTGATGCTGTCGCTGAACCCCAACCTGACGCCCGCGC AGATCGCGCAGAAGCTGGCCGCCACGGCACGCCCGTCGCAGATCACGGCGTCCAACCCCTCGTCGTGCACGGCGATGGCG CCGGGCGCCGGCCTGATGGATGCCGGCGCGGCGGTCGCCTCCGCGACACGCTGA
Upstream 100 bases:
>100_bases CAGGACGATGGCGGCGCACGCGACCGGGGTGTCGCGCCGCCTCGTCGGAAACCGGCCGCCCAGACCGCGGGCTTGCGGTC GCATCGTCAGGATCGAGAAC
Downstream 100 bases:
>100_bases GCTTTCCCCCCGGCCCGCTCCCCTCGGGCCTCACCACGGCTCGCCCGTCGCTGCGGTTGCGGCGGGCGAGCCGTCCTGCA TTCCGCCCCACGCTTGCGCC
Product: Serine metalloprotease MrpA
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 577; Mature: 577
Protein sequence:
>577_residues MKIERFHPANLRAGQLRTLASVVSMTLVASVIAGCGGGGDSGSPASTAAGTGTSTSGTASGTSGTSTSSSQLCTTALATA QGNASSTSTASSSGNTNGTPSPATVGTPDAPVDHLIVKLTSASSTSLANGARALAASSDAARVGDVISRVLTQWNAQRLQ ARVLASTAAAPALPSFDNVQLERTMSDGAAVVSLGKRVTPADAVTLAQAFAADSEVAYAEPDRRLFVSTVPTDPNYSQQW NDFDPTAGVNMPAAWNLSTGSSSVVTAVIDTGYRPHADISGNLLPGYDFISDVNTGNNGHGRSSDATDPGDWVTQAELND SSGPFYHCASAPSNSTWHGTEVAGLIGASANNGIGIAGVSWFGKILPVRALGKCGGTTSDIADAMRWAAGIPVAGVPNNT TPAKIINLSLGGSGPCGSTFQSAINDVIARGVTVVVAAGNDGLANAQDRPANCTGVIAVGATDSTGKRAWYSNFSSEITL SAPGSSILSTSNTGTTTPGSDTYAYNSGTSLAAPQVAGVAALMLSLNPNLTPAQIAQKLAATARPSQITASNPSSCTAMA PGAGLMDAGAAVASATR
Sequences:
>Translated_577_residues MKIERFHPANLRAGQLRTLASVVSMTLVASVIAGCGGGGDSGSPASTAAGTGTSTSGTASGTSGTSTSSSQLCTTALATA QGNASSTSTASSSGNTNGTPSPATVGTPDAPVDHLIVKLTSASSTSLANGARALAASSDAARVGDVISRVLTQWNAQRLQ ARVLASTAAAPALPSFDNVQLERTMSDGAAVVSLGKRVTPADAVTLAQAFAADSEVAYAEPDRRLFVSTVPTDPNYSQQW NDFDPTAGVNMPAAWNLSTGSSSVVTAVIDTGYRPHADISGNLLPGYDFISDVNTGNNGHGRSSDATDPGDWVTQAELND SSGPFYHCASAPSNSTWHGTEVAGLIGASANNGIGIAGVSWFGKILPVRALGKCGGTTSDIADAMRWAAGIPVAGVPNNT TPAKIINLSLGGSGPCGSTFQSAINDVIARGVTVVVAAGNDGLANAQDRPANCTGVIAVGATDSTGKRAWYSNFSSEITL SAPGSSILSTSNTGTTTPGSDTYAYNSGTSLAAPQVAGVAALMLSLNPNLTPAQIAQKLAATARPSQITASNPSSCTAMA PGAGLMDAGAAVASATR >Mature_577_residues MKIERFHPANLRAGQLRTLASVVSMTLVASVIAGCGGGGDSGSPASTAAGTGTSTSGTASGTSGTSTSSSQLCTTALATA QGNASSTSTASSSGNTNGTPSPATVGTPDAPVDHLIVKLTSASSTSLANGARALAASSDAARVGDVISRVLTQWNAQRLQ ARVLASTAAAPALPSFDNVQLERTMSDGAAVVSLGKRVTPADAVTLAQAFAADSEVAYAEPDRRLFVSTVPTDPNYSQQW NDFDPTAGVNMPAAWNLSTGSSSVVTAVIDTGYRPHADISGNLLPGYDFISDVNTGNNGHGRSSDATDPGDWVTQAELND SSGPFYHCASAPSNSTWHGTEVAGLIGASANNGIGIAGVSWFGKILPVRALGKCGGTTSDIADAMRWAAGIPVAGVPNNT TPAKIINLSLGGSGPCGSTFQSAINDVIARGVTVVVAAGNDGLANAQDRPANCTGVIAVGATDSTGKRAWYSNFSSEITL SAPGSSILSTSNTGTTTPGSDTYAYNSGTSLAAPQVAGVAALMLSLNPNLTPAQIAQKLAATARPSQITASNPSSCTAMA PGAGLMDAGAAVASATR
Specific function: Unknown
COG id: COG1404
COG function: function code O; Subtilisin-like serine proteases
Gene ontology:
Cell location: Secreted [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the peptidase S8 family [H]
Homologues:
Organism=Homo sapiens, GI4505579, Length=390, Percent_Identity=26.9230769230769, Blast_Score=85, Evalue=2e-16, Organism=Homo sapiens, GI299523015, Length=377, Percent_Identity=27.8514588859416, Blast_Score=82, Evalue=2e-15, Organism=Homo sapiens, GI76443679, Length=384, Percent_Identity=26.3020833333333, Blast_Score=79, Evalue=1e-14, Organism=Homo sapiens, GI20336246, Length=379, Percent_Identity=28.7598944591029, Blast_Score=74, Evalue=4e-13, Organism=Caenorhabditis elegans, GI71983555, Length=384, Percent_Identity=27.34375, Blast_Score=76, Evalue=5e-14, Organism=Caenorhabditis elegans, GI25141268, Length=384, Percent_Identity=27.34375, Blast_Score=76, Evalue=5e-14, Organism=Saccharomyces cerevisiae, GI6320775, Length=218, Percent_Identity=32.1100917431193, Blast_Score=77, Evalue=5e-15, Organism=Saccharomyces cerevisiae, GI6324576, Length=197, Percent_Identity=32.994923857868, Blast_Score=76, Evalue=1e-14, Organism=Saccharomyces cerevisiae, GI6319893, Length=209, Percent_Identity=32.5358851674641, Blast_Score=64, Evalue=4e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007280 - InterPro: IPR000209 - InterPro: IPR022398 - InterPro: IPR015500 [H]
Pfam domain/function: PF00082 Peptidase_S8; PF04151 PPC [H]
EC number: NA
Molecular weight: Translated: 57386; Mature: 57386
Theoretical pI: Translated: 5.34; Mature: 5.34
Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS00137 SUBTILASE_HIS ; PS00138 SUBTILASE_SER
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKIERFHPANLRAGQLRTLASVVSMTLVASVIAGCGGGGDSGSPASTAAGTGTSTSGTAS CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCC GTSGTSTSSSQLCTTALATAQGNASSTSTASSSGNTNGTPSPATVGTPDAPVDHLIVKLT CCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEE SASSTSLANGARALAASSDAARVGDVISRVLTQWNAQRLQARVLASTAAAPALPSFDNVQ CCCCCHHHCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEE LERTMSDGAAVVSLGKRVTPADAVTLAQAFAADSEVAYAEPDRRLFVSTVPTDPNYSQQW EEEHHCCCHHHHHHCCCCCCHHHHHHHHHHHCCCCEEECCCCCEEEEEECCCCCCCCCCC NDFDPTAGVNMPAAWNLSTGSSSVVTAVIDTGYRPHADISGNLLPGYDFISDVNTGNNGH CCCCCCCCCCCCCEEECCCCCCCEEEEEECCCCCCCCCCCCCCCCCHHHHHCCCCCCCCC GRSSDATDPGDWVTQAELNDSSGPFYHCASAPSNSTWHGTEVAGLIGASANNGIGIAGVS CCCCCCCCCCCCEEEEECCCCCCCEEEECCCCCCCCCCCCHHHHEEECCCCCCEEEEHHH WFGKILPVRALGKCGGTTSDIADAMRWAAGIPVAGVPNNTTPAKIINLSLGGSGPCGSTF HHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEECCCCCCCCHHH QSAINDVIARGVTVVVAAGNDGLANAQDRPANCTGVIAVGATDSTGKRAWYSNFSSEITL HHHHHHHHHCCEEEEEECCCCCCCCCCCCCCCCEEEEEECCCCCCCCHHHHCCCCCEEEE SAPGSSILSTSNTGTTTPGSDTYAYNSGTSLAAPQVAGVAALMLSLNPNLTPAQIAQKLA ECCCCHHEECCCCCCCCCCCCCEEECCCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHH ATARPSQITASNPSSCTAMAPGAGLMDAGAAVASATR HHCCCCEEECCCCCCCEEECCCCCCHHCCHHHHHCCC >Mature Secondary Structure MKIERFHPANLRAGQLRTLASVVSMTLVASVIAGCGGGGDSGSPASTAAGTGTSTSGTAS CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCC GTSGTSTSSSQLCTTALATAQGNASSTSTASSSGNTNGTPSPATVGTPDAPVDHLIVKLT CCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEE SASSTSLANGARALAASSDAARVGDVISRVLTQWNAQRLQARVLASTAAAPALPSFDNVQ CCCCCHHHCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEE LERTMSDGAAVVSLGKRVTPADAVTLAQAFAADSEVAYAEPDRRLFVSTVPTDPNYSQQW EEEHHCCCHHHHHHCCCCCCHHHHHHHHHHHCCCCEEECCCCCEEEEEECCCCCCCCCCC NDFDPTAGVNMPAAWNLSTGSSSVVTAVIDTGYRPHADISGNLLPGYDFISDVNTGNNGH CCCCCCCCCCCCCEEECCCCCCCEEEEEECCCCCCCCCCCCCCCCCHHHHHCCCCCCCCC GRSSDATDPGDWVTQAELNDSSGPFYHCASAPSNSTWHGTEVAGLIGASANNGIGIAGVS CCCCCCCCCCCCEEEEECCCCCCCEEEECCCCCCCCCCCCHHHHEEECCCCCCEEEEHHH WFGKILPVRALGKCGGTTSDIADAMRWAAGIPVAGVPNNTTPAKIINLSLGGSGPCGSTF HHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEECCCCCCCCHHH QSAINDVIARGVTVVVAAGNDGLANAQDRPANCTGVIAVGATDSTGKRAWYSNFSSEITL HHHHHHHHHCCEEEEEECCCCCCCCCCCCCCCCEEEEEECCCCCCCCHHHHCCCCCEEEE SAPGSSILSTSNTGTTTPGSDTYAYNSGTSLAAPQVAGVAALMLSLNPNLTPAQIAQKLA ECCCCHHEECCCCCCCCCCCCCEEECCCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHH ATARPSQITASNPSSCTAMAPGAGLMDAGAAVASATR HHCCCCEEECCCCCCCEEECCCCCCHHCCHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 2187155; 12024217 [H]