Definition Burkholderia glumae BGR1 chromosome chromosome 2, complete sequence.
Accession NC_012721
Length 2,827,333

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The map label for this gene is 238024701

Identifier: 238024701

GI number: 238024701

Start: 1718736

End: 1719524

Strand: Direct

Name: 238024701

Synonym: bglu_2g13380

Alternate gene names: NA

Gene position: 1718736-1719524 (Clockwise)

Preceding gene: 238024699

Following gene: 238024703

Centisome position: 60.79

GC content: 61.09

Gene sequence:

>789_bases
GTGGATACTGATCGAACCATTGCTGCCACCTGCGAAGCTTCGAGCGAAGAGCGATCCTGGTCGCCCGCGCGTGTCCGACC
GTGCGGCTCTCAACGGCATCCTGTTCGTGTTCAAAACGGGAATTCGTTGGAACCACTTGCCGACTCGTCTGGGCTTTGGC
TCGGGCGCCACATGCTGGCGGCGATTGAGCGACTGGCAAAAGGCTGGTGTATGGGACCAACTGCACGAGTTGCTACTCGA
CAAGTTGCGTGCGGCCGGCCAAATCGATCTGTCATACGCTGCGGTCGATTCGTCGTCCGTGCGCGCCGTTGGGGCGGGCG
AAAAACTGGCCCGAACCCCACCGATCGCGCGCGACCCGGTTCCAAGCACCACGTCCTCGTAGACGCCAACGGCGTTCCTC
TCGTTGCGATCCTGACTGGCGCGAACACCAACGACGTCACGCAGTTGCTGCCGCTCGTTGATGCGATTCCACCCATTCGC
GGCGTTCGTGGCCGACCGCTTCAGAAGCCCGGCGTCGTCTACGCCGATCGCGGCTACGATTCCACCCGACATCGTCGCGC
GTTGCGTGAACGCGGTATCAAGCCCGTGATCGCCAAGCGCCGGACCGAGCATGGCAGTGGTCTGGGCAAGTATCGTTGGG
TGGTCGAACGTACGCATTCCTGGCTCCACAATTTCCGGCGCCTACGCACTCGCTTCGAGCGACGTGCCTACATTCACGAA
GCATTCCTCAAACTTGGCTGCTCGCTCATCTGTTGGAACATCTTCAGACGAGCTGAGCAGGGTTTTTGA

Upstream 100 bases:

>100_bases
CTCCCGAGAGGGGCTGTTTACTTCCTCGGCAAGCTGTTAACCTTGGGCATCAGAACAACGGAAGTCCAAGGATGGAAGCG
CCAATCATTGACGACGAACT

Downstream 100 bases:

>100_bases
ACTGGCCTCTTAGCGCACGGAACCCGGCGCGGCATCGCGCGCGCAGGGCACGGCCGCGCCGAGCCGCTCGCGCAGCGTCT
CGACGGCGCGCGCCATGCGG

Product: transposase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 262; Mature: 262

Protein sequence:

>262_residues
MDTDRTIAATCEASSEERSWSPARVRPCGSQRHPVRVQNGNSLEPLADSSGLWLGRHMLAAIERLAKGWCMGPTARVATR
QVACGRPNRSVIRCGRFVVRARRWGGRKTGPNPTDRARPGSKHHVLVDANGVPLVAILTGANTNDVTQLLPLVDAIPPIR
GVRGRPLQKPGVVYADRGYDSTRHRRALRERGIKPVIAKRRTEHGSGLGKYRWVVERTHSWLHNFRRLRTRFERRAYIHE
AFLKLGCSLICWNIFRRAEQGF

Sequences:

>Translated_262_residues
MDTDRTIAATCEASSEERSWSPARVRPCGSQRHPVRVQNGNSLEPLADSSGLWLGRHMLAAIERLAKGWCMGPTARVATR
QVACGRPNRSVIRCGRFVVRARRWGGRKTGPNPTDRARPGSKHHVLVDANGVPLVAILTGANTNDVTQLLPLVDAIPPIR
GVRGRPLQKPGVVYADRGYDSTRHRRALRERGIKPVIAKRRTEHGSGLGKYRWVVERTHSWLHNFRRLRTRFERRAYIHE
AFLKLGCSLICWNIFRRAEQGF
>Mature_262_residues
MDTDRTIAATCEASSEERSWSPARVRPCGSQRHPVRVQNGNSLEPLADSSGLWLGRHMLAAIERLAKGWCMGPTARVATR
QVACGRPNRSVIRCGRFVVRARRWGGRKTGPNPTDRARPGSKHHVLVDANGVPLVAILTGANTNDVTQLLPLVDAIPPIR
GVRGRPLQKPGVVYADRGYDSTRHRRALRERGIKPVIAKRRTEHGSGLGKYRWVVERTHSWLHNFRRLRTRFERRAYIHE
AFLKLGCSLICWNIFRRAEQGF

Specific function: Involved in the transposition of the insertion sequence [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the transposase 11 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002559 [H]

Pfam domain/function: PF01609 Transposase_11 [H]

EC number: NA

Molecular weight: Translated: 29571; Mature: 29571

Theoretical pI: Translated: 11.98; Mature: 11.98

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.7 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
2.7 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDTDRTIAATCEASSEERSWSPARVRPCGSQRHPVRVQNGNSLEPLADSSGLWLGRHMLA
CCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCHHHHHHHH
AIERLAKGWCMGPTARVATRQVACGRPNRSVIRCGRFVVRARRWGGRKTGPNPTDRARPG
HHHHHHHCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC
SKHHVLVDANGVPLVAILTGANTNDVTQLLPLVDAIPPIRGVRGRPLQKPGVVYADRGYD
CCCEEEEECCCCEEEEEEECCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEECCCCC
STRHRRALRERGIKPVIAKRRTEHGSGLGKYRWVVERTHSWLHNFRRLRTRFERRAYIHE
HHHHHHHHHHCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AFLKLGCSLICWNIFRRAEQGF
HHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MDTDRTIAATCEASSEERSWSPARVRPCGSQRHPVRVQNGNSLEPLADSSGLWLGRHMLA
CCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCHHHHHHHH
AIERLAKGWCMGPTARVATRQVACGRPNRSVIRCGRFVVRARRWGGRKTGPNPTDRARPG
HHHHHHHCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC
SKHHVLVDANGVPLVAILTGANTNDVTQLLPLVDAIPPIRGVRGRPLQKPGVVYADRGYD
CCCEEEEECCCCEEEEEEECCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEECCCCC
STRHRRALRERGIKPVIAKRRTEHGSGLGKYRWVVERTHSWLHNFRRLRTRFERRAYIHE
HHHHHHHHHHCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AFLKLGCSLICWNIFRRAEQGF
HHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1650732 [H]