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The map label for this gene is lrrA [H]

Identifier: 238024699

GI number: 238024699

Start: 1715483

End: 1716529

Strand: Direct

Name: lrrA [H]

Synonym: bglu_2g13360

Alternate gene names: 238024699

Gene position: 1715483-1716529 (Clockwise)

Preceding gene: 238024695

Following gene: 238024701

Centisome position: 60.67

GC content: 70.77

Gene sequence:

>1047_bases
ATGCAAGTAAGAACTTCCAAGCATCGCGCGCTGCTCGGCCAGCTCAGCGACATGGACCTGCGCCTGCTGCGCGTGTTCAA
GGTGGTCGTGCAGTGCGGCGGGATGGCCGCGGCCGAACTGGAACTCAATATCGGGATCTCGACCATCAGCCGCCACGTGA
AGGACCTCGAAACGCGGCTGGGCCTGGTGCTGTGCCGGCGCGGGCGCGCCGGCTTCACGCTGACGCCGGAGGGGCAGACC
GTCTACGAGGAAACCCTGCGGCTGCTCGCGTCGCTGGAGGCGTTCCGCAGCCGCGTGGACGGCATTCACGACCGGATGGG
CGGCGAGCTGCAGATCGCCATGTTCGACAAGACCGCCACCAATCCGGCCGCGCGCGTCGCCGACGCGATCCGCCGCTTCA
CGCAGGCCGCCCCCGACGTGGGGTTGAACCTGCATGTGGGTTCGATCCAGGAGATCGAGCGCGGCGTGATCGACGGCAGC
TACCAGATCGGCATCATCCCCGAGCACCGCAGCTCGGGCAGCCTCGTCTACACCGCGCTGTTCGACGAGCGGATGCTGCT
CTATTGCGGCGCCGGCCACCCGCTGTTCGGCGCCGCGCACCGGCGGCTGGGCTGGGAGCGGATTCGCGAGCATGCCTTCG
CCGGACTCGGCTTCCATTCGCCGAACCTGCAGCTCACCCATCGCGCCAGGCTCACGCGCAGCGCCACGGCCTCGGACCAG
GAGTCGATCGCCACGCTGATCCTCTCGGGCTGCTTCCTCGGCTTCCTGCCCGACCACTACGCCGAGAGTTTCGAGCGCGC
CGGCCGCATGCAGGCGGTCGCGCCGCACCGCTTCCAGTACCGCTGCCGGTTCGTCAGCCTGCACCGGCGCTCGCCGCAGC
CGTCGCGGGCCGCGCTGCTGTTCCAGGAATGCCTGGGCGCCGCGCATGCGGGCGGTGCGCCCGGGCAGCCGGCGGCGGGC
ACGAGAGAGAAGGACGGGAATGCGGCACCGCGGGCGAACGGCGCACCGGCGGCACGCCGCGCCGCACGCAAGACCGGCAC
GGCCTGA

Upstream 100 bases:

>100_bases
GGCAGGCGCGGCGCGCTCCTCGTGGTTCGGTGTGTTGCGCATTGTTGGGGCGCCGGATAGTCTTTTGAATATCGCAATAT
CAATGTTTACTTGAGCATTC

Downstream 100 bases:

>100_bases
GCGGCGCGCCTTTCGCGCAGGGCCGGCGCGCCGCCCGCCGGCAGGCAGCGCCGCCCTCAGCCCTCGCGCGCGGTGCCGAG
ATGCGTGTCGAGAAACGCGA

Product: LysR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 348; Mature: 348

Protein sequence:

>348_residues
MQVRTSKHRALLGQLSDMDLRLLRVFKVVVQCGGMAAAELELNIGISTISRHVKDLETRLGLVLCRRGRAGFTLTPEGQT
VYEETLRLLASLEAFRSRVDGIHDRMGGELQIAMFDKTATNPAARVADAIRRFTQAAPDVGLNLHVGSIQEIERGVIDGS
YQIGIIPEHRSSGSLVYTALFDERMLLYCGAGHPLFGAAHRRLGWERIREHAFAGLGFHSPNLQLTHRARLTRSATASDQ
ESIATLILSGCFLGFLPDHYAESFERAGRMQAVAPHRFQYRCRFVSLHRRSPQPSRAALLFQECLGAAHAGGAPGQPAAG
TREKDGNAAPRANGAPAARRAARKTGTA

Sequences:

>Translated_348_residues
MQVRTSKHRALLGQLSDMDLRLLRVFKVVVQCGGMAAAELELNIGISTISRHVKDLETRLGLVLCRRGRAGFTLTPEGQT
VYEETLRLLASLEAFRSRVDGIHDRMGGELQIAMFDKTATNPAARVADAIRRFTQAAPDVGLNLHVGSIQEIERGVIDGS
YQIGIIPEHRSSGSLVYTALFDERMLLYCGAGHPLFGAAHRRLGWERIREHAFAGLGFHSPNLQLTHRARLTRSATASDQ
ESIATLILSGCFLGFLPDHYAESFERAGRMQAVAPHRFQYRCRFVSLHRRSPQPSRAALLFQECLGAAHAGGAPGQPAAG
TREKDGNAAPRANGAPAARRAARKTGTA
>Mature_348_residues
MQVRTSKHRALLGQLSDMDLRLLRVFKVVVQCGGMAAAELELNIGISTISRHVKDLETRLGLVLCRRGRAGFTLTPEGQT
VYEETLRLLASLEAFRSRVDGIHDRMGGELQIAMFDKTATNPAARVADAIRRFTQAAPDVGLNLHVGSIQEIERGVIDGS
YQIGIIPEHRSSGSLVYTALFDERMLLYCGAGHPLFGAAHRRLGWERIREHAFAGLGFHSPNLQLTHRARLTRSATASDQ
ESIATLILSGCFLGFLPDHYAESFERAGRMQAVAPHRFQYRCRFVSLHRRSPQPSRAALLFQECLGAAHAGGAPGQPAAG
TREKDGNAAPRANGAPAARRAARKTGTA

Specific function: Unknown

COG id: COG0583

COG function: function code K; Transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH lysR-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000847
- InterPro:   IPR005119
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00126 HTH_1; PF03466 LysR_substrate [H]

EC number: NA

Molecular weight: Translated: 37979; Mature: 37979

Theoretical pI: Translated: 10.41; Mature: 10.41

Prosite motif: PS50931 HTH_LYSR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQVRTSKHRALLGQLSDMDLRLLRVFKVVVQCGGMAAAELELNIGISTISRHVKDLETRL
CCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCEEEEEEEECCHHHHHHHHHHHHHHH
GLVLCRRGRAGFTLTPEGQTVYEETLRLLASLEAFRSRVDGIHDRMGGELQIAMFDKTAT
HHHHHCCCCCCCEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCC
NPAARVADAIRRFTQAAPDVGLNLHVGSIQEIERGVIDGSYQIGIIPEHRSSGSLVYTAL
CHHHHHHHHHHHHHHCCCCCCCEEECCCHHHHHHHHCCCCEEEEEEECCCCCCCEEEEEE
FDERMLLYCGAGHPLFGAAHRRLGWERIREHAFAGLGFHSPNLQLTHRARLTRSATASDQ
CCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEHHHHHHHHCCCCCH
ESIATLILSGCFLGFLPDHYAESFERAGRMQAVAPHRFQYRCRFVSLHRRSPQPSRAALL
HHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCCCHHHHEEEEEHHCCCCCCHHHHHH
FQECLGAAHAGGAPGQPAAGTREKDGNAAPRANGAPAARRAARKTGTA
HHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCC
>Mature Secondary Structure
MQVRTSKHRALLGQLSDMDLRLLRVFKVVVQCGGMAAAELELNIGISTISRHVKDLETRL
CCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCEEEEEEEECCHHHHHHHHHHHHHHH
GLVLCRRGRAGFTLTPEGQTVYEETLRLLASLEAFRSRVDGIHDRMGGELQIAMFDKTAT
HHHHHCCCCCCCEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCC
NPAARVADAIRRFTQAAPDVGLNLHVGSIQEIERGVIDGSYQIGIIPEHRSSGSLVYTAL
CHHHHHHHHHHHHHHCCCCCCCEEECCCHHHHHHHHCCCCEEEEEEECCCCCCCEEEEEE
FDERMLLYCGAGHPLFGAAHRRLGWERIREHAFAGLGFHSPNLQLTHRARLTRSATASDQ
CCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEHHHHHHHHCCCCCH
ESIATLILSGCFLGFLPDHYAESFERAGRMQAVAPHRFQYRCRFVSLHRRSPQPSRAALL
HHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCCCHHHHEEEEEHHCCCCCCHHHHHH
FQECLGAAHAGGAPGQPAAGTREKDGNAAPRANGAPAARRAARKTGTA
HHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8661945 [H]