Definition | Burkholderia glumae BGR1 chromosome chromosome 2, complete sequence. |
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Accession | NC_012721 |
Length | 2,827,333 |
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The map label for this gene is bioC [C]
Identifier: 238024703
GI number: 238024703
Start: 1720752
End: 1721489
Strand: Direct
Name: bioC [C]
Synonym: bglu_2g13400
Alternate gene names: 238024703
Gene position: 1720752-1721489 (Clockwise)
Preceding gene: 238024701
Following gene: 238024705
Centisome position: 60.86
GC content: 70.05
Gene sequence:
>738_bases GTGACACAGAACATCTACGACGATCCGGCTTTCTTCGCCAGCTACGCCCAGCTGAACCGCTCGATTCACGGGCTCGACGG CGCCCCGGAATGGCCGGCGCTGCGCGCGCTGCTGCCCGACCCGCGCGAGCTGCGCATCGTTGATCTCGGCTGCGGCTACG GCTGGTTCTGCCGCTGGGCGGCCGAGCACGGCGCGGCCAGCGTGCTCGGCATCGACGTCTCGGAGCGCATGCTCGAACGC GCCGCCGCCTCCACCAGCGACACGCGCGTCGCCTACCGCCGCACCGATCTCGAACGGCTCGACCTGCCGGCCGCCGCATT CGATCTCGTCTACAGCTCGCTGGTGTTCCACTACATCGAGAACCTGCCCGGGCTGATGCAGGCGATCCACCACGCGCTGG TGCCCGACGGCCGGCTGGTGTTCTCGATGGAGCATCCGGTGCTGACCGCGCCGGCGCATCCCGGCTTTCGCAGCGACGCC GACGGCGGCCGCTTCTGGCCGCTGGAGGGCTATCAGCGCGAGGGGCGGCGCGAGGTGAACTGGCTGACCGAGGGCGTGAT CAAGCAGCATCGCACGCTCGGCACGCTGCTGAATCTGCTGGTGGAGTCGGGGTTCGTGTTCGAACATCTGACCGAATGGG GGCCGACGCCGGCGCAGGTGGCGGCGCAGCCCGAACTGGAGAAGGAACGCGAGCGGCCGATGATGATGCTGGTGGCCGCG CGCCGGCGCGCCCGCTGA
Upstream 100 bases:
>100_bases TCCCCGAGCATTCATCACCTCGCCGCCGCGCGGCTCGCCGGGCGTGCCCGCCGGACAGCCGGGCGCGGACGGCTGCGAAT CGATCTCGGGAGCCCCAGCG
Downstream 100 bases:
>100_bases AGACGGCCGCGGGCCGATTACATCTTCACCTGGTCGACGAAGGTCTTCTTGCCGGCCTTGTAGCCGTACAGCGAGATCAC GCCGTGCTTCAGGTCGCCCT
Product: type 11 methyltransferase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 245; Mature: 244
Protein sequence:
>245_residues MTQNIYDDPAFFASYAQLNRSIHGLDGAPEWPALRALLPDPRELRIVDLGCGYGWFCRWAAEHGAASVLGIDVSERMLER AAASTSDTRVAYRRTDLERLDLPAAAFDLVYSSLVFHYIENLPGLMQAIHHALVPDGRLVFSMEHPVLTAPAHPGFRSDA DGGRFWPLEGYQREGRREVNWLTEGVIKQHRTLGTLLNLLVESGFVFEHLTEWGPTPAQVAAQPELEKERERPMMMLVAA RRRAR
Sequences:
>Translated_245_residues MTQNIYDDPAFFASYAQLNRSIHGLDGAPEWPALRALLPDPRELRIVDLGCGYGWFCRWAAEHGAASVLGIDVSERMLER AAASTSDTRVAYRRTDLERLDLPAAAFDLVYSSLVFHYIENLPGLMQAIHHALVPDGRLVFSMEHPVLTAPAHPGFRSDA DGGRFWPLEGYQREGRREVNWLTEGVIKQHRTLGTLLNLLVESGFVFEHLTEWGPTPAQVAAQPELEKERERPMMMLVAA RRRAR >Mature_244_residues TQNIYDDPAFFASYAQLNRSIHGLDGAPEWPALRALLPDPRELRIVDLGCGYGWFCRWAAEHGAASVLGIDVSERMLERA AASTSDTRVAYRRTDLERLDLPAAAFDLVYSSLVFHYIENLPGLMQAIHHALVPDGRLVFSMEHPVLTAPAHPGFRSDAD GGRFWPLEGYQREGRREVNWLTEGVIKQHRTLGTLLNLLVESGFVFEHLTEWGPTPAQVAAQPELEKERERPMMMLVAAR RRAR
Specific function: Bioc Is Involved In An Early, But Chemically Unexplored, Step In The Conversion Of Pimelic Acid To Biotin. [C]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1786994, Length=111, Percent_Identity=34.2342342342342, Blast_Score=61, Evalue=8e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013216 [H]
Pfam domain/function: PF08241 Methyltransf_11 [H]
EC number: NA
Molecular weight: Translated: 27631; Mature: 27500
Theoretical pI: Translated: 6.24; Mature: 6.24
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTQNIYDDPAFFASYAQLNRSIHGLDGAPEWPALRALLPDPRELRIVDLGCGYGWFCRWA CCCCCCCCHHHHHHHHHHHCHHCCCCCCCCCCHHHHHCCCCCCEEEEEECCCCHHHHHHH AEHGAASVLGIDVSERMLERAAASTSDTRVAYRRTDLERLDLPAAAFDLVYSSLVFHYIE HHCCCCEEEECCHHHHHHHHHHCCCCCCCHHHHHCCHHHHCCCHHHHHHHHHHHHHHHHH NLPGLMQAIHHALVPDGRLVFSMEHPVLTAPAHPGFRSDADGGRFWPLEGYQREGRREVN CCHHHHHHHHHHHCCCCCEEEEECCCEEECCCCCCCCCCCCCCEECCCCCHHHCCCHHHH WLTEGVIKQHRTLGTLLNLLVESGFVFEHLTEWGPTPAQVAAQPELEKERERPMMMLVAA HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCHHHHCCCCCHHHHHCCHHHHHHHH RRRAR HHHCC >Mature Secondary Structure TQNIYDDPAFFASYAQLNRSIHGLDGAPEWPALRALLPDPRELRIVDLGCGYGWFCRWA CCCCCCCHHHHHHHHHHHCHHCCCCCCCCCCHHHHHCCCCCCEEEEEECCCCHHHHHHH AEHGAASVLGIDVSERMLERAAASTSDTRVAYRRTDLERLDLPAAAFDLVYSSLVFHYIE HHCCCCEEEECCHHHHHHHHHHCCCCCCCHHHHHCCHHHHCCCHHHHHHHHHHHHHHHHH NLPGLMQAIHHALVPDGRLVFSMEHPVLTAPAHPGFRSDADGGRFWPLEGYQREGRREVN CCHHHHHHHHHHHCCCCCEEEEECCCEEECCCCCCCCCCCCCCEECCCCCHHHCCCHHHH WLTEGVIKQHRTLGTLLNLLVESGFVFEHLTEWGPTPAQVAAQPELEKERERPMMMLVAA HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCHHHHCCCCCHHHHHCCHHHHHHHH RRRAR HHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7542800 [H]