Definition | Burkholderia glumae BGR1 chromosome chromosome 2, complete sequence. |
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Accession | NC_012721 |
Length | 2,827,333 |
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The map label for this gene is 238024648
Identifier: 238024648
GI number: 238024648
Start: 1625408
End: 1627522
Strand: Direct
Name: 238024648
Synonym: bglu_2g12630
Alternate gene names: NA
Gene position: 1625408-1627522 (Clockwise)
Preceding gene: 238024647
Following gene: 238024653
Centisome position: 57.49
GC content: 71.77
Gene sequence:
>2115_bases ATGCCAAGACTTCCGCAACTTCGCCAGGAGCTGACGCTCTCGCCCGGCGCGGCCACGCCCGACGGCGCACCGACCTGGAT GCTGCACGACCCCGCCGCCAACCGTTTCTTCCAGATCGGCTGGCCGGCCTTCGAGATGCTCTCGCGCTGGCCGCTCGACG ACGCGCAGGCGATCGTCGAGGCCGTCAATCGCGAAACCACGCTGCACGTGACGCTCGACGAGCTCGAGGCGCTCGCGCGC ATGCTGCGCCAGCAGAACCTGCTGGTATCCGCGAGCGCCGCCGACACCGCGCGGCTCGAACAGCACGACGCCGCGCAGCG CACCTCGCACGCGATGTGGCTGCTCAAGCATTACCTGATGATCCGGATTCCGCTCTGGCATCCGATGCCGCTGCTGCGCG CCACCGAACGCTACGTGCGCTTCGCGTTCCGGCCGGTGTCGTGGATCGTGGTGGCCGCCGTCGCGCTGATCGGGCTGATC CTCGCCTCGCGCCACTGGGACGAGTTCGTTCACACCTTCCACGGCTACGCCGACTGGCGCGGCCTGGTCGGCGTGGGCAT CGCGCTCGGCTTCGCGAAGATCCTGCACGAGTTCGCGCACGCCTACACGGCGCAGCGCCACGGCTGCCGCGTGCCCACCA TGGGGGTGGCGCTGCTGGTGATGCTGCCGGTGCTCTACACCGACACCACCGAGGCCTGGAAGGTGCCGGCGCGGCGCGAC CGGCTCTGGATCGGCGCGGCCGGCATGTTGAGCGAGATCGCGCTGGCCGCGTTCGCGACGCTGGCCTGGAGCCTGCTGCC CGACGGGCCGCTGCGCGGCGGCGCGTTCATGCTCGCCACCACCACCTGGGTGGCCACGCTCGCCATCAACGCCAGCCCGT TCATGCGCTTCGACGGCTATTTCCTGCTGTCGGACTGGCTCGACATGCCGAACCTGCACGACCGCGCGTTCGCGCTCGGC CGCTGGTGGCTGCGCGAGTGGCTGTTCGGCTTCGGCGACCCGCAGCCCGAGCCGTGCCGCGCCTCGCGGCGGCGCTTCCT GATCGCGTTCTCGTTCGCCACCTGGCTCTACCGGCTGGTGGTGTTCATGTCGATCGCGCTGGTGGTCTATCACGCGTTCT TCAAGCTGCTCGGCATGCTGCTGTTCTGCGTCGAGTTCGGCTGGTTCATCGTGCGCCCGGTCTGGCGCGAGGCGACGCTC ACCTGGCGGCGCCGCGATGCGCTGCGCTGGTGCCGCGAGACACGCCGCAGCGCGCTGCTCGGCGCCGCGCTGCTGGGCTT GCTGGTGCTGCCGTGGCATGCCGGCGTGAGCGCACCGGCCGTGCTCGCGCCGCAACGCGCGCAGGGCCTCTACACCGTCG CGCCCGGCTATCTCGCCGCCACCCCGACGCCGGCGCGCGACGGCCAGCGGGTGCGCGCCGGCGACACGCTCGCCGTGCTG GTGTCGCCCGAACTCGACGCGAAGCTGGCCGCCGCCAGCGCCGACGAGGCGATGCTGCATTGGGAAGTGGACCAGCAGCC GTTCGACGAGCGGCTGCAAAAGCAGGGCACCGCGCTCTCGCATCGCTGGGCCTCGGCGCGCCAGACCGTGGCCGGGCTGC AGGCGCAGATCGCGCAGCTGACGATCCGCGCGCCATTCGACGGCACCGTGCAGGCCAACGACGACGCGCAGGCGCCCGGC ACCTGGCTGCCGCGCGGCGAACGGATCTACGACCTGATCGCGCCCGGCGCCGTGAAGGGCGACGCCTACGTGGGCGAGAA CGACGTGGCACGCCTGAAGGCCGGGCAGTCGGCCAGCTTCGTGGCGAGCCTGCCCGAACTCGCGGCGCGCCGCTGCCGGA TCGACGCGATCGACAAGGTCAACCTGGCCACGCTCGACGCGCCGTCGGTGGCCAGCACCTACGGCGGCCCGATCCCGGCC GAGCAGGACGCGAGGACGCATCAGCTGGTGCCGCTCGCCGCCACCTGGCAGGTGCGTTTCGGTGAATGCAGCGGCGGCGA CGGACTGGGGCGCGAGGTGCCGGGTACGGTGCAGCTCGGCGCGGGGCGCGAGAGCTACCTCGGCCAGGGCATTCGGTTCG TGGCGGCGGTGCTGCAGCGCGAAGCGGGGTTTTGA
Upstream 100 bases:
>100_bases CGCATCCGCGGCCCGTGGGTGCCGGCGATCTATTACGTGCTGCGCCGCCCGCTGACGCTCGCGCGTCAATGGCTCGGCTG GTGACGCCACGCTTGCCGCC
Downstream 100 bases:
>100_bases GGGCGCGGCGGCGCCCGCTGGCCTTGCCGCCGGCGCGGCCGCGAGCTCCGGGGCCGCGGGCGGCCGCGCCGCCGGGCGCG GGCCGGGCCACGCTCAGAAC
Product: peptidase family M50
Products: NA
Alternate protein names: M50 Family Peptidase; Peptidase; Membrane-Fusion Protein; Peptidase Family M; HlyD Domain-Containing Protein; Transmembrane Protein; Membrane-Fusion Domain; Zinc Metallopeptidase; Secretion Protein HlyD Family Protein; Membrane Zinc Metallopeptidase; Membrane-Fusion Protein Contains Peptidase Family; Zinc Metallopeptidase Family Protein; Integral Membrane Protein; Zn-Dependent Protease
Number of amino acids: Translated: 704; Mature: 703
Protein sequence:
>704_residues MPRLPQLRQELTLSPGAATPDGAPTWMLHDPAANRFFQIGWPAFEMLSRWPLDDAQAIVEAVNRETTLHVTLDELEALAR MLRQQNLLVSASAADTARLEQHDAAQRTSHAMWLLKHYLMIRIPLWHPMPLLRATERYVRFAFRPVSWIVVAAVALIGLI LASRHWDEFVHTFHGYADWRGLVGVGIALGFAKILHEFAHAYTAQRHGCRVPTMGVALLVMLPVLYTDTTEAWKVPARRD RLWIGAAGMLSEIALAAFATLAWSLLPDGPLRGGAFMLATTTWVATLAINASPFMRFDGYFLLSDWLDMPNLHDRAFALG RWWLREWLFGFGDPQPEPCRASRRRFLIAFSFATWLYRLVVFMSIALVVYHAFFKLLGMLLFCVEFGWFIVRPVWREATL TWRRRDALRWCRETRRSALLGAALLGLLVLPWHAGVSAPAVLAPQRAQGLYTVAPGYLAATPTPARDGQRVRAGDTLAVL VSPELDAKLAAASADEAMLHWEVDQQPFDERLQKQGTALSHRWASARQTVAGLQAQIAQLTIRAPFDGTVQANDDAQAPG TWLPRGERIYDLIAPGAVKGDAYVGENDVARLKAGQSASFVASLPELAARRCRIDAIDKVNLATLDAPSVASTYGGPIPA EQDARTHQLVPLAATWQVRFGECSGGDGLGREVPGTVQLGAGRESYLGQGIRFVAAVLQREAGF
Sequences:
>Translated_704_residues MPRLPQLRQELTLSPGAATPDGAPTWMLHDPAANRFFQIGWPAFEMLSRWPLDDAQAIVEAVNRETTLHVTLDELEALAR MLRQQNLLVSASAADTARLEQHDAAQRTSHAMWLLKHYLMIRIPLWHPMPLLRATERYVRFAFRPVSWIVVAAVALIGLI LASRHWDEFVHTFHGYADWRGLVGVGIALGFAKILHEFAHAYTAQRHGCRVPTMGVALLVMLPVLYTDTTEAWKVPARRD RLWIGAAGMLSEIALAAFATLAWSLLPDGPLRGGAFMLATTTWVATLAINASPFMRFDGYFLLSDWLDMPNLHDRAFALG RWWLREWLFGFGDPQPEPCRASRRRFLIAFSFATWLYRLVVFMSIALVVYHAFFKLLGMLLFCVEFGWFIVRPVWREATL TWRRRDALRWCRETRRSALLGAALLGLLVLPWHAGVSAPAVLAPQRAQGLYTVAPGYLAATPTPARDGQRVRAGDTLAVL VSPELDAKLAAASADEAMLHWEVDQQPFDERLQKQGTALSHRWASARQTVAGLQAQIAQLTIRAPFDGTVQANDDAQAPG TWLPRGERIYDLIAPGAVKGDAYVGENDVARLKAGQSASFVASLPELAARRCRIDAIDKVNLATLDAPSVASTYGGPIPA EQDARTHQLVPLAATWQVRFGECSGGDGLGREVPGTVQLGAGRESYLGQGIRFVAAVLQREAGF >Mature_703_residues PRLPQLRQELTLSPGAATPDGAPTWMLHDPAANRFFQIGWPAFEMLSRWPLDDAQAIVEAVNRETTLHVTLDELEALARM LRQQNLLVSASAADTARLEQHDAAQRTSHAMWLLKHYLMIRIPLWHPMPLLRATERYVRFAFRPVSWIVVAAVALIGLIL ASRHWDEFVHTFHGYADWRGLVGVGIALGFAKILHEFAHAYTAQRHGCRVPTMGVALLVMLPVLYTDTTEAWKVPARRDR LWIGAAGMLSEIALAAFATLAWSLLPDGPLRGGAFMLATTTWVATLAINASPFMRFDGYFLLSDWLDMPNLHDRAFALGR WWLREWLFGFGDPQPEPCRASRRRFLIAFSFATWLYRLVVFMSIALVVYHAFFKLLGMLLFCVEFGWFIVRPVWREATLT WRRRDALRWCRETRRSALLGAALLGLLVLPWHAGVSAPAVLAPQRAQGLYTVAPGYLAATPTPARDGQRVRAGDTLAVLV SPELDAKLAAASADEAMLHWEVDQQPFDERLQKQGTALSHRWASARQTVAGLQAQIAQLTIRAPFDGTVQANDDAQAPGT WLPRGERIYDLIAPGAVKGDAYVGENDVARLKAGQSASFVASLPELAARRCRIDAIDKVNLATLDAPSVASTYGGPIPAE QDARTHQLVPLAATWQVRFGECSGGDGLGREVPGTVQLGAGRESYLGQGIRFVAAVLQREAGF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 77976; Mature: 77845
Theoretical pI: Translated: 8.75; Mature: 8.75
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPRLPQLRQELTLSPGAATPDGAPTWMLHDPAANRFFQIGWPAFEMLSRWPLDDAQAIVE CCCCHHHHHHHCCCCCCCCCCCCCEEEEECCCCCCEEEECCHHHHHHHHCCCCHHHHHHH AVNRETTLHVTLDELEALARMLRQQNLLVSASAADTARLEQHDAAQRTSHAMWLLKHYLM HHCCCCEEEEEHHHHHHHHHHHHHCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHH IRIPLWHPMPLLRATERYVRFAFRPVSWIVVAAVALIGLILASRHWDEFVHTFHGYADWR EEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHH GLVGVGIALGFAKILHEFAHAYTAQRHGCRVPTMGVALLVMLPVLYTDTTEAWKVPARRD HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCHHHHCCCCCCC RLWIGAAGMLSEIALAAFATLAWSLLPDGPLRGGAFMLATTTWVATLAINASPFMRFDGY CEEEEHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEHHHHHHHEEECCCCCEEECCE FLLSDWLDMPNLHDRAFALGRWWLREWLFGFGDPQPEPCRASRRRFLIAFSFATWLYRLV EEEHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCCEEEEEEHHHHHHHHHH VFMSIALVVYHAFFKLLGMLLFCVEFGWFIVRPVWREATLTWRRRDALRWCRETRRSALL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GAALLGLLVLPWHAGVSAPAVLAPQRAQGLYTVAPGYLAATPTPARDGQRVRAGDTLAVL HHHHHHHHHHHHCCCCCCCCEECCHHHCCEEEECCCCEECCCCCCCCCCEEECCCEEEEE VSPELDAKLAAASADEAMLHWEVDQQPFDERLQKQGTALSHRWASARQTVAGLQAQIAQL ECCCCCCHHHHCCCCCEEEEEECCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHE TIRAPFDGTVQANDDAQAPGTWLPRGERIYDLIAPGAVKGDAYVGENDVARLKAGQSASF EEECCCCCCEECCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCEECCCCHHHHCCCCCHHH VASLPELAARRCRIDAIDKVNLATLDAPSVASTYGGPIPAEQDARTHQLVPLAATWQVRF HHHHHHHHHHHCCCCCCCCCCEEECCCCCHHHHCCCCCCCCCCCCCCEEEEEEEEEEEEE GECSGGDGLGREVPGTVQLGAGRESYLGQGIRFVAAVLQREAGF CCCCCCCCCCCCCCCCEEECCCCHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure PRLPQLRQELTLSPGAATPDGAPTWMLHDPAANRFFQIGWPAFEMLSRWPLDDAQAIVE CCCHHHHHHHCCCCCCCCCCCCCEEEEECCCCCCEEEECCHHHHHHHHCCCCHHHHHHH AVNRETTLHVTLDELEALARMLRQQNLLVSASAADTARLEQHDAAQRTSHAMWLLKHYLM HHCCCCEEEEEHHHHHHHHHHHHHCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHH IRIPLWHPMPLLRATERYVRFAFRPVSWIVVAAVALIGLILASRHWDEFVHTFHGYADWR EEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHH GLVGVGIALGFAKILHEFAHAYTAQRHGCRVPTMGVALLVMLPVLYTDTTEAWKVPARRD HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCHHHHCCCCCCC RLWIGAAGMLSEIALAAFATLAWSLLPDGPLRGGAFMLATTTWVATLAINASPFMRFDGY CEEEEHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEHHHHHHHEEECCCCCEEECCE FLLSDWLDMPNLHDRAFALGRWWLREWLFGFGDPQPEPCRASRRRFLIAFSFATWLYRLV EEEHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCCEEEEEEHHHHHHHHHH VFMSIALVVYHAFFKLLGMLLFCVEFGWFIVRPVWREATLTWRRRDALRWCRETRRSALL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GAALLGLLVLPWHAGVSAPAVLAPQRAQGLYTVAPGYLAATPTPARDGQRVRAGDTLAVL HHHHHHHHHHHHCCCCCCCCEECCHHHCCEEEECCCCEECCCCCCCCCCEEECCCEEEEE VSPELDAKLAAASADEAMLHWEVDQQPFDERLQKQGTALSHRWASARQTVAGLQAQIAQL ECCCCCCHHHHCCCCCEEEEEECCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHE TIRAPFDGTVQANDDAQAPGTWLPRGERIYDLIAPGAVKGDAYVGENDVARLKAGQSASF EEECCCCCCEECCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCEECCCCHHHHCCCCCHHH VASLPELAARRCRIDAIDKVNLATLDAPSVASTYGGPIPAEQDARTHQLVPLAATWQVRF HHHHHHHHHHHCCCCCCCCCCEEECCCCCHHHHCCCCCCCCCCCCCCEEEEEEEEEEEEE GECSGGDGLGREVPGTVQLGAGRESYLGQGIRFVAAVLQREAGF CCCCCCCCCCCCCCCCEEECCCCHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA