Definition | Burkholderia glumae BGR1 chromosome chromosome 2, complete sequence. |
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Accession | NC_012721 |
Length | 2,827,333 |
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The map label for this gene is 238024653
Identifier: 238024653
GI number: 238024653
Start: 1635108
End: 1635950
Strand: Direct
Name: 238024653
Synonym: bglu_2g12680
Alternate gene names: NA
Gene position: 1635108-1635950 (Clockwise)
Preceding gene: 238024648
Following gene: 238024656
Centisome position: 57.83
GC content: 68.56
Gene sequence:
>843_bases ATGTCGGCTTCCATCCATCCGTTTCGCAACAAGCGCGAAAAACCGTATCAATGGGCGATGATCGTGATCGGCGTCCTGTT GTGGATCGCGATCGCTCAATGGCTCCGCTCGCACTGGTATCAGCCGAAGTTCGGGCACGTGATCCGGCTCTACGCAGGCT ACGCGATGGTGCTAGCGGTCGGGCGCTGGCTGGCGGGCGGCGCCTATCGGGCGACGGCGTTCGGCAATATGGTGCTGGTC GGCCCGAGCCAGTTTCCGGCGCTGCATGCGATGGTGGTGGAGGCGTCGCGGGAAATCGGTCTGAGCGAGCCGCCGCGAAC CTTCATCCACAACGCGAACGGCGTGTTCAACGCGTTCGCGCGGCGGCTGTTCGGCGGCCGCTACGTGTTCCTGACCGCCG CGCTGGTGGAAGCCAACAACGACGCGCAGGTGCGCTTCGTGATCGGCCACGAGCTCGGCCATCACGCGGCGGGCCACCTG AATCCGTGGCTCAACGCGCTCCGGCTGCCCGCCCATCTCGTCCCCTTCCTCGGCAAGGCCTATTCCCGCTCGCGCGAATA CACGTGCGACAGCATCGGCGCCTACCTGGCGAAGGACGCGGCCGCCTCGCGCGGCGCGCTGCAGATGCTGGGCTGCGGAT GCCGCCGCCTGAACGGCTCGATGAACTGCGAGGCCTTCGTGGCCCAGGAGCAGCAGGTGCCGCCGATCTTCGGCTTCCTC ACCGAGATCAACCGCTCCCACCCGCGCCTGACGCGCCGCGTCGCCGCGATCCACCGCGGCACGACGCACGCCGGCGCGGC CGAGGCGCGCGAGCCGCAACTGCCGACCGGCAGCCTGGCCTGA
Upstream 100 bases:
>100_bases TCCAGGCCCTGCCGCGCATCGGCGCAAGCGGCAGGGCCGGCTTCGAGCGCGCCACGCAGCACCCATCATCCAACAAGCAT TTATCCATCGGGGAAATTCC
Downstream 100 bases:
>100_bases CGGCTGCCGCCGCGCCCGGCGCCCGGCGCCCGGGCGCTCAGCGGCTCGCGCGCCGCGATACCAGCCGGTATGCGGCGATC GATCCGCCCACCGCGAGCAG
Product: Zn-dependent protease
Products: NA
Alternate protein names: Peptidase M; Zn-Dependent Protease; Protease; Zn-Dependent Protease With Chaperone Function
Number of amino acids: Translated: 280; Mature: 279
Protein sequence:
>280_residues MSASIHPFRNKREKPYQWAMIVIGVLLWIAIAQWLRSHWYQPKFGHVIRLYAGYAMVLAVGRWLAGGAYRATAFGNMVLV GPSQFPALHAMVVEASREIGLSEPPRTFIHNANGVFNAFARRLFGGRYVFLTAALVEANNDAQVRFVIGHELGHHAAGHL NPWLNALRLPAHLVPFLGKAYSRSREYTCDSIGAYLAKDAAASRGALQMLGCGCRRLNGSMNCEAFVAQEQQVPPIFGFL TEINRSHPRLTRRVAAIHRGTTHAGAAEAREPQLPTGSLA
Sequences:
>Translated_280_residues MSASIHPFRNKREKPYQWAMIVIGVLLWIAIAQWLRSHWYQPKFGHVIRLYAGYAMVLAVGRWLAGGAYRATAFGNMVLV GPSQFPALHAMVVEASREIGLSEPPRTFIHNANGVFNAFARRLFGGRYVFLTAALVEANNDAQVRFVIGHELGHHAAGHL NPWLNALRLPAHLVPFLGKAYSRSREYTCDSIGAYLAKDAAASRGALQMLGCGCRRLNGSMNCEAFVAQEQQVPPIFGFL TEINRSHPRLTRRVAAIHRGTTHAGAAEAREPQLPTGSLA >Mature_279_residues SASIHPFRNKREKPYQWAMIVIGVLLWIAIAQWLRSHWYQPKFGHVIRLYAGYAMVLAVGRWLAGGAYRATAFGNMVLVG PSQFPALHAMVVEASREIGLSEPPRTFIHNANGVFNAFARRLFGGRYVFLTAALVEANNDAQVRFVIGHELGHHAAGHLN PWLNALRLPAHLVPFLGKAYSRSREYTCDSIGAYLAKDAAASRGALQMLGCGCRRLNGSMNCEAFVAQEQQVPPIFGFLT EINRSHPRLTRRVAAIHRGTTHAGAAEAREPQLPTGSLA
Specific function: Unknown
COG id: COG0501
COG function: function code O; Zn-dependent protease with chaperone function
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30863; Mature: 30732
Theoretical pI: Translated: 10.60; Mature: 10.60
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSASIHPFRNKREKPYQWAMIVIGVLLWIAIAQWLRSHWYQPKFGHVIRLYAGYAMVLAV CCCCCCCHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH GRWLAGGAYRATAFGNMVLVGPSQFPALHAMVVEASREIGLSEPPRTFIHNANGVFNAFA HHHHCCCCEEEHCCCCEEEECCCCCHHHHHHHHHHHHHCCCCCCCHHHHCCCCHHHHHHH RRLFGGRYVFLTAALVEANNDAQVRFVIGHELGHHAAGHLNPWLNALRLPAHLVPFLGKA HHHHCCCHHHEEHHHHCCCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH YSRSREYTCDSIGAYLAKDAAASRGALQMLGCGCRRLNGSMNCEAFVAQEQQVPPIFGFL HHCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCEEECCCCCCCHHHHHH TEINRSHPRLTRRVAAIHRGTTHAGAAEAREPQLPTGSLA HHHCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure SASIHPFRNKREKPYQWAMIVIGVLLWIAIAQWLRSHWYQPKFGHVIRLYAGYAMVLAV CCCCCCHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH GRWLAGGAYRATAFGNMVLVGPSQFPALHAMVVEASREIGLSEPPRTFIHNANGVFNAFA HHHHCCCCEEEHCCCCEEEECCCCCHHHHHHHHHHHHHCCCCCCCHHHHCCCCHHHHHHH RRLFGGRYVFLTAALVEANNDAQVRFVIGHELGHHAAGHLNPWLNALRLPAHLVPFLGKA HHHHCCCHHHEEHHHHCCCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH YSRSREYTCDSIGAYLAKDAAASRGALQMLGCGCRRLNGSMNCEAFVAQEQQVPPIFGFL HHCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCEEECCCCCCCHHHHHH TEINRSHPRLTRRVAAIHRGTTHAGAAEAREPQLPTGSLA HHHCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA