Definition | Burkholderia glumae BGR1 chromosome chromosome 2, complete sequence. |
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Accession | NC_012721 |
Length | 2,827,333 |
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The map label for this gene is 238024589
Identifier: 238024589
GI number: 238024589
Start: 1535689
End: 1536513
Strand: Reverse
Name: 238024589
Synonym: bglu_2g12000
Alternate gene names: NA
Gene position: 1536513-1535689 (Counterclockwise)
Preceding gene: 238024590
Following gene: 238024588
Centisome position: 54.34
GC content: 79.64
Gene sequence:
>825_bases TTGAACGGATGGCCGCGCCGGACGGCCCGAGGCGCGCGCCCGCCGACTGCCGGCGGGGTTGCCCGCCGGGGCGGCGGACC GCGCCGGCCCGCCCGACGGCGCCATGCCCTTGCGCCGCCGGGCCGACGGCCCCGCTTCGCCCCACGCGCCCGGCGTTCGG GTGTGCCGCGCCAGGCCGCCGGGTTCGGGCGTATACCAACGCGCAACGGCAGGGCGCGCGCGGCATCGCCGCGACGAGCG CGCCTGCCGGCCCACTGCGACCCGACGCGTATGACCCGAATCCCGCCCTCGAACCTGCCGCTCGCCCAGGCGCCGCCGGC CGCCGACGCTTCCGCGCCGGGCCCGGCACCGGACGCGCCCGGCCCGGCGAGCGCGCCGGGCGGCTCGCTCGCCGGGCTGC GGAGCATCACGGCGGACGGAACACGCGCGCGCGGCGCGCTGGCCGCCTTGCGCAGCGAGGCCACCCGCGAGCGGCTCGGC CGCCTGCGCCGCGAACTCGCGCGCATCAGCCCGCCGCCCGCCACCGCCGAGGCGGCGCACGCGGCGGTGCTTGCCGCCCT GGCGCGCGCGAATCTGGCCGGCTGGACCATGCCGGCGCTCGACGAGGCCGAGGTGCTGGCCTATCCGGACGGCTCGCGCC GCATCATGCTGATCGCGCACGCGATCATCTTCAATCCGTCGGGCGCGTTCCGGATCGTCGATCTGCGCGCGAACGCGCCG GTCTATTTCGAGGCGGCGGGCGAGGGCGCGTGCCGCTTCGTGATGCCGCGCGATCGGCGCGGCGCGGGCGTGGCGAACGG CCGGCGGCGCAGCGGGGCGCGCTAG
Upstream 100 bases:
>100_bases GGCTGGCGCCGCCCGGGCCGGTGATCACGCCGGCCGACTATCCGGCGTTCCGCAAACTGGCGCTGGCCGTGAAGCGGGAC CTGCGCACCCAGCTCGTCTA
Downstream 100 bases:
>100_bases CGCGGCGGCGCGGCCCGCGTCGTTTCGCCGGCCTCGCACGGTCCGGTCCCGGGCCGGGACCGGGCCGGAACCAGGCGCGT GGCTCGGCCGCCGCGATGGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 274; Mature: 274
Protein sequence:
>274_residues MNGWPRRTARGARPPTAGGVARRGGGPRRPARRRHALAPPGRRPRFAPRARRSGVPRQAAGFGRIPTRNGRARAASPRRA RLPAHCDPTRMTRIPPSNLPLAQAPPAADASAPGPAPDAPGPASAPGGSLAGLRSITADGTRARGALAALRSEATRERLG RLRRELARISPPPATAEAAHAAVLAALARANLAGWTMPALDEAEVLAYPDGSRRIMLIAHAIIFNPSGAFRIVDLRANAP VYFEAAGEGACRFVMPRDRRGAGVANGRRRSGAR
Sequences:
>Translated_274_residues MNGWPRRTARGARPPTAGGVARRGGGPRRPARRRHALAPPGRRPRFAPRARRSGVPRQAAGFGRIPTRNGRARAASPRRA RLPAHCDPTRMTRIPPSNLPLAQAPPAADASAPGPAPDAPGPASAPGGSLAGLRSITADGTRARGALAALRSEATRERLG RLRRELARISPPPATAEAAHAAVLAALARANLAGWTMPALDEAEVLAYPDGSRRIMLIAHAIIFNPSGAFRIVDLRANAP VYFEAAGEGACRFVMPRDRRGAGVANGRRRSGAR >Mature_274_residues MNGWPRRTARGARPPTAGGVARRGGGPRRPARRRHALAPPGRRPRFAPRARRSGVPRQAAGFGRIPTRNGRARAASPRRA RLPAHCDPTRMTRIPPSNLPLAQAPPAADASAPGPAPDAPGPASAPGGSLAGLRSITADGTRARGALAALRSEATRERLG RLRRELARISPPPATAEAAHAAVLAALARANLAGWTMPALDEAEVLAYPDGSRRIMLIAHAIIFNPSGAFRIVDLRANAP VYFEAAGEGACRFVMPRDRRGAGVANGRRRSGAR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28786; Mature: 28786
Theoretical pI: Translated: 12.64; Mature: 12.64
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNGWPRRTARGARPPTAGGVARRGGGPRRPARRRHALAPPGRRPRFAPRARRSGVPRQAA CCCCCCCCCCCCCCCCCCCHHHCCCCCCCHHHHHCCCCCCCCCCCCCCHHHHCCCCHHHC GFGRIPTRNGRARAASPRRARLPAHCDPTRMTRIPPSNLPLAQAPPAADASAPGPAPDAP CCCCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC GPASAPGGSLAGLRSITADGTRARGALAALRSEATRERLGRLRRELARISPPPATAEAAH CCCCCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHH AAVLAALARANLAGWTMPALDEAEVLAYPDGSRRIMLIAHAIIFNPSGAFRIVDLRANAP HHHHHHHHHHCCCCCCCCCCCCCEEEECCCCCCEEEEEEEEEEECCCCCEEEEEEECCCC VYFEAAGEGACRFVMPRDRRGAGVANGRRRSGAR EEEEECCCCEEEEECCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MNGWPRRTARGARPPTAGGVARRGGGPRRPARRRHALAPPGRRPRFAPRARRSGVPRQAA CCCCCCCCCCCCCCCCCCCHHHCCCCCCCHHHHHCCCCCCCCCCCCCCHHHHCCCCHHHC GFGRIPTRNGRARAASPRRARLPAHCDPTRMTRIPPSNLPLAQAPPAADASAPGPAPDAP CCCCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC GPASAPGGSLAGLRSITADGTRARGALAALRSEATRERLGRLRRELARISPPPATAEAAH CCCCCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHH AAVLAALARANLAGWTMPALDEAEVLAYPDGSRRIMLIAHAIIFNPSGAFRIVDLRANAP HHHHHHHHHHCCCCCCCCCCCCCEEEECCCCCCEEEEEEEEEEECCCCCEEEEEEECCCC VYFEAAGEGACRFVMPRDRRGAGVANGRRRSGAR EEEEECCCCEEEEECCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA