Definition | Burkholderia glumae BGR1 chromosome chromosome 2, complete sequence. |
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Accession | NC_012721 |
Length | 2,827,333 |
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The map label for this gene is 238024590
Identifier: 238024590
GI number: 238024590
Start: 1536510
End: 1538408
Strand: Reverse
Name: 238024590
Synonym: bglu_2g12010
Alternate gene names: NA
Gene position: 1538408-1536510 (Counterclockwise)
Preceding gene: 238024592
Following gene: 238024589
Centisome position: 54.41
GC content: 71.99
Gene sequence:
>1899_bases ATGAACCGAATCCTCCGCTGCCCGAGGGCAGCCGCCGTGCCGCGTGCGTCGTTCCTCGCGTTGGTCCTGGCGCCGTGGTG CGTGGCCGCGCATGCGGCCGCCTACCAGCCGGACATCACCATGCTGACGCAGGACATCGCCTACGACGTCCATGCCGACG GCACCTATACGAAGGACCTGGCCGAAAGCTGGCGGATCGACACCGAGAAGGGCGTGCGCGAGGACGGCGAGGGGCGGCTT TCCTACAGCACCGCGCTGCAGGCGCTCGAGGTGACCGAGGCCTACACGCTCACGAAGGACGGCCGGCGCATCGCCGTCGA GGCCGGACAGATCCGCGAGCAGCAGAGCCCGGAGAGCGCGCGGGCGCCGATGTTCGACGATCACAAGGTGAAGGTCGTGG TGTTTCCGGCCGTCGAGGTGGGCGCGACGCTGGTGCTGCATTCGCGGCTCACGCAGAAGCTGCCGATCTTCCCGGGCCAG TTCTCGGCGATGCACGATTTCACCGACGACGTGCGCCGCGAATCGATGCACCTGACGGTGCGCGCGCCGGCCGCGATGCC GCTGCAGGCCGACGCCGTCGATCTGCCGGGCGGTCGCGCCGGCTCCGACGCGCCCGACACGCAGCTGTGGCGCTGGTCGC TGTCCGGGCGGCCGGCGCGCATGCCGGAGCTGTCGGCGACGGCCAAGCTCGATCACAGCCCGCGCGTGGCGATCACGAGC TTCGCCGACTACGCGCAGATCGGCGCCGCCTACCAGCAGCGCGCGCTCGCCCGGGCGGCGGTGACGCCGCGCGTGCGCGC GCTTGCCGAGCAGCTCACGCGGGGCGTGAGCGATCGCCGCAGGCAGGCCGAGATCCTCTACGACTGGGTCAGCACGCAGA TCCGCTACGTGGCGATCCATCTCGGCTTCGGCGGCGTGGTGCCGCATGATGCCGACGCGATCCTGGCCGCCGGCTACGGC GACTGCAAGGACCACGTCACGCTGCTGGAGGCGCTGCTCGCCGCCAGGTCGATCCGCGGCGAGCCGGTGCTGATCCACCT CGGCAGCGCCTACTGGGTGCCGAAGGTGGCGCTGCCGCTCGGCGTGTTCGACCACGTCATCAGCTGGCTGCCCGAGTTCG GCCTGTACCTCGATTCCACCGCCGGCTTCGCGCGCTTCGGCGTGCTGCCGCCGGGCGAGCTCGGCAAGACGGCGCTCGTG GCGGGCGGCGAGGGCAGCCCGGGCGGGCTGCGCACGCTGCCGCTCGCGAATCCCGAGGCGGCGCGCGTGAGCGTGACCAC GCGCCTGAGCGTGGACCGCGAGGGCACCGTCACCGGCCATGCCCGCATCGAGAACGGCGGCTATTTCGATCTGGCCGCGC GGCAGCTGATGGCGTCCGTGCCGCCGGGCATGGAGGAGCAGCTCGCCGAGCGCGTGCTGTTCGTCACCGGGCAGGACGGC TCGGGCACCTATCACCACGGCGACGTGCGCGACCTGACGGTGCCGTTCGACTACGGCACCGAGTTCCGGCTGCCCGACTA TGCGCTGTTGCCCGGGCCGGGCGCGTTCAAGGTGCCGCCGGGACTCGGCAGCCTCGAGGGCATCAGCGGCACCTTCATGG CGGCCGGGCCCAGCACGCGGCAGTTTCCGATCGTCGTGCCGGCGCGCCACCTGACCGAGATCTCGATCATCACGCTGCCC GCCTCGATCCGCGTGCCGCGCCTGCCGCAGCCGGTGTCGGTGTCGTCGCCGCTCGGCACCTACACGGCCAGCTACCGCGC GAAGGGCGCGACCGTGACCGTCAGGCGCGAGCTGTGGCTGGCGCCGCCCGGGCCGGTGATCACGCCGGCCGACTATCCGG CGTTCCGCAAACTGGCGCTGGCCGTGAAGCGGGACCTGCGCACCCAGCTCGTCTATTGA
Upstream 100 bases:
>100_bases GTGCGCCGCCGGCTGTGCCCGGCCGGTCCGATCCATCGGCCCGACGCCTCGTCGTGCCGATTGACGGGCGCCGGACCCGC TGCCGTCAACCAGGATCACC
Downstream 100 bases:
>100_bases ACGGATGGCCGCGCCGGACGGCCCGAGGCGCGCGCCCGCCGACTGCCGGCGGGGTTGCCCGCCGGGGCGGCGGACCGCGC CGGCCCGCCCGACGGCGCCA
Product: transglutaminase
Products: NA
Alternate protein names: Transmembrane Protein; TPR Repeat-Containing Protein; Secreted Protein; Tetratricopeptide Protein; Transglutaminase-Like; Transglutaminase Domain-Containing Protein; Tetratricopeptide Repeat Domain Protein; Lipoprotein
Number of amino acids: Translated: 632; Mature: 632
Protein sequence:
>632_residues MNRILRCPRAAAVPRASFLALVLAPWCVAAHAAAYQPDITMLTQDIAYDVHADGTYTKDLAESWRIDTEKGVREDGEGRL SYSTALQALEVTEAYTLTKDGRRIAVEAGQIREQQSPESARAPMFDDHKVKVVVFPAVEVGATLVLHSRLTQKLPIFPGQ FSAMHDFTDDVRRESMHLTVRAPAAMPLQADAVDLPGGRAGSDAPDTQLWRWSLSGRPARMPELSATAKLDHSPRVAITS FADYAQIGAAYQQRALARAAVTPRVRALAEQLTRGVSDRRRQAEILYDWVSTQIRYVAIHLGFGGVVPHDADAILAAGYG DCKDHVTLLEALLAARSIRGEPVLIHLGSAYWVPKVALPLGVFDHVISWLPEFGLYLDSTAGFARFGVLPPGELGKTALV AGGEGSPGGLRTLPLANPEAARVSVTTRLSVDREGTVTGHARIENGGYFDLAARQLMASVPPGMEEQLAERVLFVTGQDG SGTYHHGDVRDLTVPFDYGTEFRLPDYALLPGPGAFKVPPGLGSLEGISGTFMAAGPSTRQFPIVVPARHLTEISIITLP ASIRVPRLPQPVSVSSPLGTYTASYRAKGATVTVRRELWLAPPGPVITPADYPAFRKLALAVKRDLRTQLVY
Sequences:
>Translated_632_residues MNRILRCPRAAAVPRASFLALVLAPWCVAAHAAAYQPDITMLTQDIAYDVHADGTYTKDLAESWRIDTEKGVREDGEGRL SYSTALQALEVTEAYTLTKDGRRIAVEAGQIREQQSPESARAPMFDDHKVKVVVFPAVEVGATLVLHSRLTQKLPIFPGQ FSAMHDFTDDVRRESMHLTVRAPAAMPLQADAVDLPGGRAGSDAPDTQLWRWSLSGRPARMPELSATAKLDHSPRVAITS FADYAQIGAAYQQRALARAAVTPRVRALAEQLTRGVSDRRRQAEILYDWVSTQIRYVAIHLGFGGVVPHDADAILAAGYG DCKDHVTLLEALLAARSIRGEPVLIHLGSAYWVPKVALPLGVFDHVISWLPEFGLYLDSTAGFARFGVLPPGELGKTALV AGGEGSPGGLRTLPLANPEAARVSVTTRLSVDREGTVTGHARIENGGYFDLAARQLMASVPPGMEEQLAERVLFVTGQDG SGTYHHGDVRDLTVPFDYGTEFRLPDYALLPGPGAFKVPPGLGSLEGISGTFMAAGPSTRQFPIVVPARHLTEISIITLP ASIRVPRLPQPVSVSSPLGTYTASYRAKGATVTVRRELWLAPPGPVITPADYPAFRKLALAVKRDLRTQLVY >Mature_632_residues MNRILRCPRAAAVPRASFLALVLAPWCVAAHAAAYQPDITMLTQDIAYDVHADGTYTKDLAESWRIDTEKGVREDGEGRL SYSTALQALEVTEAYTLTKDGRRIAVEAGQIREQQSPESARAPMFDDHKVKVVVFPAVEVGATLVLHSRLTQKLPIFPGQ FSAMHDFTDDVRRESMHLTVRAPAAMPLQADAVDLPGGRAGSDAPDTQLWRWSLSGRPARMPELSATAKLDHSPRVAITS FADYAQIGAAYQQRALARAAVTPRVRALAEQLTRGVSDRRRQAEILYDWVSTQIRYVAIHLGFGGVVPHDADAILAAGYG DCKDHVTLLEALLAARSIRGEPVLIHLGSAYWVPKVALPLGVFDHVISWLPEFGLYLDSTAGFARFGVLPPGELGKTALV AGGEGSPGGLRTLPLANPEAARVSVTTRLSVDREGTVTGHARIENGGYFDLAARQLMASVPPGMEEQLAERVLFVTGQDG SGTYHHGDVRDLTVPFDYGTEFRLPDYALLPGPGAFKVPPGLGSLEGISGTFMAAGPSTRQFPIVVPARHLTEISIITLP ASIRVPRLPQPVSVSSPLGTYTASYRAKGATVTVRRELWLAPPGPVITPADYPAFRKLALAVKRDLRTQLVY
Specific function: Unknown
COG id: COG1305
COG function: function code E; Transglutaminase-like enzymes, putative cysteine proteases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 68315; Mature: 68315
Theoretical pI: Translated: 7.81; Mature: 7.81
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNRILRCPRAAAVPRASFLALVLAPWCVAAHAAAYQPDITMLTQDIAYDVHADGTYTKDL CCCCCCCCCHHCCCHHHHHHHHHHHHHHHHHHHHCCCCHHEEEHHHEEEEECCCCCHHHH AESWRIDTEKGVREDGEGRLSYSTALQALEVTEAYTLTKDGRRIAVEAGQIREQQSPESA HHHCCCCCHHCCCCCCCCCEEHHHHHHHHHHHHHEEEECCCCEEEEECHHHHHHCCCCHH RAPMFDDHKVKVVVFPAVEVGATLVLHSRLTQKLPIFPGQFSAMHDFTDDVRRESMHLTV CCCCCCCCEEEEEEECCHHHCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCEEEEE RAPAAMPLQADAVDLPGGRAGSDAPDTQLWRWSLSGRPARMPELSATAKLDHSPRVAITS ECCCCCCCCCCCEECCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCEECCCCCCEEEEC FADYAQIGAAYQQRALARAAVTPRVRALAEQLTRGVSDRRRQAEILYDWVSTQIRYVAIH HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCEEEEEEE LGFGGVVPHDADAILAAGYGDCKDHVTLLEALLAARSIRGEPVLIHLGSAYWVPKVALPL ECCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCHHHHHH GVFDHVISWLPEFGLYLDSTAGFARFGVLPPGELGKTALVAGGEGSPGGLRTLPLANPEA HHHHHHHHHHHHHCCEEECCCCCEEECCCCCCCCCCEEEEECCCCCCCCEEEECCCCCCC ARVSVTTRLSVDREGTVTGHARIENGGYFDLAARQLMASVPPGMEEQLAERVLFVTGQDG EEEEEEEEEEECCCCCEEEEEEECCCCEEHHHHHHHHHHCCCCHHHHHHCEEEEEECCCC SGTYHHGDVRDLTVPFDYGTEFRLPDYALLPGPGAFKVPPGLGSLEGISGTFMAAGPSTR CCCEECCCCEEEEEECCCCCCCCCCCEEECCCCCCEECCCCCCCCCCCCCEEEECCCCCC QFPIVVPARHLTEISIITLPASIRVPRLPQPVSVSSPLGTYTASYRAKGATVTVRRELWL CEEEEECCHHCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCEECCCCEEEEEEEEEE APPGPVITPADYPAFRKLALAVKRDLRTQLVY CCCCCEECCCCCHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MNRILRCPRAAAVPRASFLALVLAPWCVAAHAAAYQPDITMLTQDIAYDVHADGTYTKDL CCCCCCCCCHHCCCHHHHHHHHHHHHHHHHHHHHCCCCHHEEEHHHEEEEECCCCCHHHH AESWRIDTEKGVREDGEGRLSYSTALQALEVTEAYTLTKDGRRIAVEAGQIREQQSPESA HHHCCCCCHHCCCCCCCCCEEHHHHHHHHHHHHHEEEECCCCEEEEECHHHHHHCCCCHH RAPMFDDHKVKVVVFPAVEVGATLVLHSRLTQKLPIFPGQFSAMHDFTDDVRRESMHLTV CCCCCCCCEEEEEEECCHHHCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCEEEEE RAPAAMPLQADAVDLPGGRAGSDAPDTQLWRWSLSGRPARMPELSATAKLDHSPRVAITS ECCCCCCCCCCCEECCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCEECCCCCCEEEEC FADYAQIGAAYQQRALARAAVTPRVRALAEQLTRGVSDRRRQAEILYDWVSTQIRYVAIH HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCEEEEEEE LGFGGVVPHDADAILAAGYGDCKDHVTLLEALLAARSIRGEPVLIHLGSAYWVPKVALPL ECCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCHHHHHH GVFDHVISWLPEFGLYLDSTAGFARFGVLPPGELGKTALVAGGEGSPGGLRTLPLANPEA HHHHHHHHHHHHHCCEEECCCCCEEECCCCCCCCCCEEEEECCCCCCCCEEEECCCCCCC ARVSVTTRLSVDREGTVTGHARIENGGYFDLAARQLMASVPPGMEEQLAERVLFVTGQDG EEEEEEEEEEECCCCCEEEEEEECCCCEEHHHHHHHHHHCCCCHHHHHHCEEEEEECCCC SGTYHHGDVRDLTVPFDYGTEFRLPDYALLPGPGAFKVPPGLGSLEGISGTFMAAGPSTR CCCEECCCCEEEEEECCCCCCCCCCCEEECCCCCCEECCCCCCCCCCCCCEEEECCCCCC QFPIVVPARHLTEISIITLPASIRVPRLPQPVSVSSPLGTYTASYRAKGATVTVRRELWL CEEEEECCHHCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCEECCCCEEEEEEEEEE APPGPVITPADYPAFRKLALAVKRDLRTQLVY CCCCCEECCCCCHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA