Definition | Burkholderia glumae BGR1 chromosome chromosome 2, complete sequence. |
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Accession | NC_012721 |
Length | 2,827,333 |
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The map label for this gene is 238024569
Identifier: 238024569
GI number: 238024569
Start: 1497290
End: 1498417
Strand: Reverse
Name: 238024569
Synonym: bglu_2g11760
Alternate gene names: NA
Gene position: 1498417-1497290 (Counterclockwise)
Preceding gene: 238024570
Following gene: 238024567
Centisome position: 53.0
GC content: 67.64
Gene sequence:
>1128_bases ATGACGACCTCGCTTTCCTTCCAGCCGCTCACCGGCGTGCGCGGTTTTCTCGTGCCGATGTCGTGCTCCGATCTTTCCGC GACGACGCAGTTCTTCATCGAGCGGCTCGGTTTTCGCATCGATGCGATTTTCCCCGCCGACAGCCCTCGCACCGCGATCC TGTTCGGCTGCAACCTGGCGCTGCGCATCACGCTCGGCGCGCCCGACGGGGTGACCAAGCTCGACGTGCTGTGCGACGAC GAACGGCAACTCGGCGAAACGCAGCGCACGCTGATCGCGCCGAACGGTGTCGAGATCAGGCTCGTCGCGGCCGAGCCGCG TATGAAGGAACCCGTCAACCGCCAGGAACTCGTGCTGTCGCGCGCGCAGGAGGGCGCCGAATGGAGCGTCGGACGCGCGG GGCTGCGCTACCGCGATCTGCTGCCGAAGCGCCAGGGCGGCGCGTTCATCGCGTCGCACATCCGCATTCTGGAAGGCGGC CCGGTGCCCGACTACGTGCACTTCCACAAGATTCGCTTCCAGATGATCTTCTGCCGCAAGGGCTGGGTGCGCGTCGTCTA CGAAGGCCAGGGCGAGCCGTTCGTGCTCGATGCCGGCGATTGCGTGCTGCAGCCGCCGTGCATCCGGCACCGCGTCCTCG AGAGTTCGGCGGGCGCGGAGGTGGTCGAGATCGGCACGCCGGCCGAGCACATCACGATTGCCGATCACGACATGACGCTG CCGACGCCGACGCTGCAAGCGGGCCGAGAATTTGACGGACAGCGCTTCGTGCGCTATGAAAAGCGGGGCGCGGACTGGGC GCCGTGGCGGATGCCCGGCTTCATCGCCTCCGATACCGGCATCGGCCAGGCAACCGGCGGCCTGGCCGGCGTGCGCCTCG TGCGCCCTGCGCAAGGCGAGAGGGCGGCGCCGCTCGCGCAGCAGCGGCACGCGTCGGAATTCTGCTTCTTCTTCGTGCTG TCGGGACGGTTGACGGTGTGGCAAGGCGCGCGCGCCTATCCGCTGGCGGCCGACGACAGCATGGCGATTCCCGGCGAAAC GCCGTATGGCTTCGCGCAATGCAGCGCCGATCTCGAACTGCTCGAAGTGACGCTGCCGGCCGATCTGACGGTTTCGACCA GCCAATGA
Upstream 100 bases:
>100_bases AGGCATGCCGTGTGGGGCGAGCGGGCCGCCTCGGGCCGCCTGGTGAACCCCACGCCTCCTGCCTGTTCCATCACGATCGC AACCCCGGGATACCTTGTCC
Downstream 100 bases:
>100_bases GCGGGGCGAGACGGCGGACGCCGGGCCTGGCTTGCCGCTGCGACCGGCAGCAAAAAGGCGCGACCCGCGCCGCGCCTTTT CGTGTGGTTCCCGACGGCAG
Product: Cupin 2 conserved barrel domain-containing protein
Products: NA
Alternate protein names: Cupin 2 Conserved Barrel Domain-Containing Protein; Cupin Domain-Containing Protein; Cupin 2 Conserved Barrel Domain Protein
Number of amino acids: Translated: 375; Mature: 374
Protein sequence:
>375_residues MTTSLSFQPLTGVRGFLVPMSCSDLSATTQFFIERLGFRIDAIFPADSPRTAILFGCNLALRITLGAPDGVTKLDVLCDD ERQLGETQRTLIAPNGVEIRLVAAEPRMKEPVNRQELVLSRAQEGAEWSVGRAGLRYRDLLPKRQGGAFIASHIRILEGG PVPDYVHFHKIRFQMIFCRKGWVRVVYEGQGEPFVLDAGDCVLQPPCIRHRVLESSAGAEVVEIGTPAEHITIADHDMTL PTPTLQAGREFDGQRFVRYEKRGADWAPWRMPGFIASDTGIGQATGGLAGVRLVRPAQGERAAPLAQQRHASEFCFFFVL SGRLTVWQGARAYPLAADDSMAIPGETPYGFAQCSADLELLEVTLPADLTVSTSQ
Sequences:
>Translated_375_residues MTTSLSFQPLTGVRGFLVPMSCSDLSATTQFFIERLGFRIDAIFPADSPRTAILFGCNLALRITLGAPDGVTKLDVLCDD ERQLGETQRTLIAPNGVEIRLVAAEPRMKEPVNRQELVLSRAQEGAEWSVGRAGLRYRDLLPKRQGGAFIASHIRILEGG PVPDYVHFHKIRFQMIFCRKGWVRVVYEGQGEPFVLDAGDCVLQPPCIRHRVLESSAGAEVVEIGTPAEHITIADHDMTL PTPTLQAGREFDGQRFVRYEKRGADWAPWRMPGFIASDTGIGQATGGLAGVRLVRPAQGERAAPLAQQRHASEFCFFFVL SGRLTVWQGARAYPLAADDSMAIPGETPYGFAQCSADLELLEVTLPADLTVSTSQ >Mature_374_residues TTSLSFQPLTGVRGFLVPMSCSDLSATTQFFIERLGFRIDAIFPADSPRTAILFGCNLALRITLGAPDGVTKLDVLCDDE RQLGETQRTLIAPNGVEIRLVAAEPRMKEPVNRQELVLSRAQEGAEWSVGRAGLRYRDLLPKRQGGAFIASHIRILEGGP VPDYVHFHKIRFQMIFCRKGWVRVVYEGQGEPFVLDAGDCVLQPPCIRHRVLESSAGAEVVEIGTPAEHITIADHDMTLP TPTLQAGREFDGQRFVRYEKRGADWAPWRMPGFIASDTGIGQATGGLAGVRLVRPAQGERAAPLAQQRHASEFCFFFVLS GRLTVWQGARAYPLAADDSMAIPGETPYGFAQCSADLELLEVTLPADLTVSTSQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 41110; Mature: 40978
Theoretical pI: Translated: 6.18; Mature: 6.18
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTSLSFQPLTGVRGFLVPMSCSDLSATTQFFIERLGFRIDAIFPADSPRTAILFGCNLA CCCCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHCCEEEEEECCCCCCEEEEEECCEE LRITLGAPDGVTKLDVLCDDERQLGETQRTLIAPNGVEIRLVAAEPRMKEPVNRQELVLS EEEEECCCCCCEEEEEEECCHHHHCCCHHEEECCCCCEEEEEECCCCCCCCCCHHHHHHH RAQEGAEWSVGRAGLRYRDLLPKRQGGAFIASHIRILEGGPVPDYVHFHKIRFQMIFCRK HHCCCCCCCCCCCCCHHHHCCCCCCCCEEEEEEEEEEECCCCCCHHEEEEEEEEEEEECC GWVRVVYEGQGEPFVLDAGDCVLQPPCIRHRVLESSAGAEVVEIGTPAEHITIADHDMTL CEEEEEEECCCCEEEEECCCCEECCHHHHHHHHHCCCCCEEEEECCCCCEEEEECCCCCC PTPTLQAGREFDGQRFVRYEKRGADWAPWRMPGFIASDTGIGQATGGLAGVRLVRPAQGE CCCCHHCCCCCCCCCEEEEHHCCCCCCCCCCCCEEECCCCCCCCCCCCCEEEEECCCCCC RAAPLAQQRHASEFCFFFVLSGRLTVWQGARAYPLAADDSMAIPGETPYGFAQCSADLEL CCCCHHHHHHHHHEEEEEEECCCEEEECCCCCCCCCCCCCEECCCCCCCCHHHHCCCEEE LEVTLPADLTVSTSQ EEEEECCCEEEECCC >Mature Secondary Structure TTSLSFQPLTGVRGFLVPMSCSDLSATTQFFIERLGFRIDAIFPADSPRTAILFGCNLA CCCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHCCEEEEEECCCCCCEEEEEECCEE LRITLGAPDGVTKLDVLCDDERQLGETQRTLIAPNGVEIRLVAAEPRMKEPVNRQELVLS EEEEECCCCCCEEEEEEECCHHHHCCCHHEEECCCCCEEEEEECCCCCCCCCCHHHHHHH RAQEGAEWSVGRAGLRYRDLLPKRQGGAFIASHIRILEGGPVPDYVHFHKIRFQMIFCRK HHCCCCCCCCCCCCCHHHHCCCCCCCCEEEEEEEEEEECCCCCCHHEEEEEEEEEEEECC GWVRVVYEGQGEPFVLDAGDCVLQPPCIRHRVLESSAGAEVVEIGTPAEHITIADHDMTL CEEEEEEECCCCEEEEECCCCEECCHHHHHHHHHCCCCCEEEEECCCCCEEEEECCCCCC PTPTLQAGREFDGQRFVRYEKRGADWAPWRMPGFIASDTGIGQATGGLAGVRLVRPAQGE CCCCHHCCCCCCCCCEEEEHHCCCCCCCCCCCCEEECCCCCCCCCCCCCEEEEECCCCCC RAAPLAQQRHASEFCFFFVLSGRLTVWQGARAYPLAADDSMAIPGETPYGFAQCSADLEL CCCCHHHHHHHHHEEEEEEECCCEEEECCCCCCCCCCCCCEECCCCCCCCHHHHCCCEEE LEVTLPADLTVSTSQ EEEEECCCEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA