Definition | Burkholderia glumae BGR1 chromosome chromosome 2, complete sequence. |
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Accession | NC_012721 |
Length | 2,827,333 |
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The map label for this gene is 238024567
Identifier: 238024567
GI number: 238024567
Start: 1494774
End: 1495646
Strand: Reverse
Name: 238024567
Synonym: bglu_2g11740
Alternate gene names: NA
Gene position: 1495646-1494774 (Counterclockwise)
Preceding gene: 238024569
Following gene: 238024566
Centisome position: 52.9
GC content: 65.41
Gene sequence:
>873_bases ATGCCCACTCCCGAGCAGGCCAACGTCGATCTCGTGACCGCCAACAAGGTGCGCGATCTGCTGAGCCGGCATGGCATTCC GCCACGAAGCCAAAACACGACGATCGCGAACGTGCTGGGCCTGAGCTTTTCGGTCGTCACGCGCAAGATGAAAGGCCTGA TCCCGTGGAATCTGTCGCAGTTGCAGGATATTGCGACGCACTTCGGCGTGCCGCCTGCGATCCTGCTCGACGACAAGGGC ACCCAGCCGGCCGCGGCCGACATGATCGACGCGACCTTCGTGGTGGAATCGCGGCGCTTTCGCTGCCGCGCCGCGATCTC GACGAAGGCCAGCAGCCAGGTCGAAACGGATTTCGTCGCGTCGCAGTGGCAGGGCGCCTGGATCGTCACCGAGCGGGCCC ACGCGCACCAGGGCCGCACCTATCCGGTCGAACTGATCGAACTGCGCTCGGCCCAGCCGACCGCCTATGCCGCGCGGATC GCCGTGGTCGACGATGCGCCGGATGTCGCCGAGACGGTGTGCGAGTATTTCATCGAGAAAGGGGTGAACGCGATTCCGTA TTTCGACGGCGCGAGCTTCCGCAAGGCGCTGGCGAGCGAGGATTTCGACGCCTACATCCTCGACTGGATGCTCGGCGACC AGACGGCCGCCGAACTCGTGCGGGGCATCCGCTCGAGCGAGAACAGCGGCGCGCCGATCTTCCTGCTGACGGGCAAGATC TCGACCGGCGAGGCGAGCGAGGAGGAGATCGCGCACATCGTGTCGCACTACAATGCGCGCTGCGAAGAAAAACCGGTGCG CCTGCCGATCCTGTTTGCCGAAGTCGCACGCGAACTGAAGATCACGTCGCCGGCCGCGGCCGGCTCGAGCTGA
Upstream 100 bases:
>100_bases GAGAAAAATGGCCTGTCAAGGCCATTTTGATCTTAAAACTTGCGCAATGCGTCAGTTTTGGTATGCTTTTCCCTTCCCGC CTTTCTGAGACCCCATCGAG
Downstream 100 bases:
>100_bases GCCCGCCGCGACGCGCCATCGCATCAAGCACACGGGAGAAAGTCATGCGCAAGTCAAGCATCTGGACCAGAAGCCTTCTG GCGGCCTGCCTGCTCGGAAT
Product: response regulator receiver protein
Products: NA
Alternate protein names: Response Regulator; Two-Component Response Regulator; Response Regulator Receiver
Number of amino acids: Translated: 290; Mature: 289
Protein sequence:
>290_residues MPTPEQANVDLVTANKVRDLLSRHGIPPRSQNTTIANVLGLSFSVVTRKMKGLIPWNLSQLQDIATHFGVPPAILLDDKG TQPAAADMIDATFVVESRRFRCRAAISTKASSQVETDFVASQWQGAWIVTERAHAHQGRTYPVELIELRSAQPTAYAARI AVVDDAPDVAETVCEYFIEKGVNAIPYFDGASFRKALASEDFDAYILDWMLGDQTAAELVRGIRSSENSGAPIFLLTGKI STGEASEEEIAHIVSHYNARCEEKPVRLPILFAEVARELKITSPAAAGSS
Sequences:
>Translated_290_residues MPTPEQANVDLVTANKVRDLLSRHGIPPRSQNTTIANVLGLSFSVVTRKMKGLIPWNLSQLQDIATHFGVPPAILLDDKG TQPAAADMIDATFVVESRRFRCRAAISTKASSQVETDFVASQWQGAWIVTERAHAHQGRTYPVELIELRSAQPTAYAARI AVVDDAPDVAETVCEYFIEKGVNAIPYFDGASFRKALASEDFDAYILDWMLGDQTAAELVRGIRSSENSGAPIFLLTGKI STGEASEEEIAHIVSHYNARCEEKPVRLPILFAEVARELKITSPAAAGSS >Mature_289_residues PTPEQANVDLVTANKVRDLLSRHGIPPRSQNTTIANVLGLSFSVVTRKMKGLIPWNLSQLQDIATHFGVPPAILLDDKGT QPAAADMIDATFVVESRRFRCRAAISTKASSQVETDFVASQWQGAWIVTERAHAHQGRTYPVELIELRSAQPTAYAARIA VVDDAPDVAETVCEYFIEKGVNAIPYFDGASFRKALASEDFDAYILDWMLGDQTAAELVRGIRSSENSGAPIFLLTGKIS TGEASEEEIAHIVSHYNARCEEKPVRLPILFAEVARELKITSPAAAGSS
Specific function: Unknown
COG id: COG0745
COG function: function code TK; Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31595; Mature: 31464
Theoretical pI: Translated: 5.19; Mature: 5.19
Prosite motif: PS50110 RESPONSE_REGULATORY
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPTPEQANVDLVTANKVRDLLSRHGIPPRSQNTTIANVLGLSFSVVTRKMKGLIPWNLSQ CCCCCCCCEEEEEHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHH LQDIATHFGVPPAILLDDKGTQPAAADMIDATFVVESRRFRCRAAISTKASSQVETDFVA HHHHHHHCCCCCEEEECCCCCCCHHHHHHHHHHEECCCCCEEHHHHHCCCCCHHHHHHHH SQWQGAWIVTERAHAHQGRTYPVELIELRSAQPTAYAARIAVVDDAPDVAETVCEYFIEK HCCCCEEEEEECHHHCCCCCCCHHHEEECCCCCCEEEEEEEEECCCCHHHHHHHHHHHHC GVNAIPYFDGASFRKALASEDFDAYILDWMLGDQTAAELVRGIRSSENSGAPIFLLTGKI CCCCCCCCCCHHHHHHHHCCCCCCEEHHHHHCCHHHHHHHHHHHCCCCCCCEEEEEECCC STGEASEEEIAHIVSHYNARCEEKPVRLPILFAEVARELKITSPAAAGSS CCCCCCHHHHHHHHHHHCCCCCCCCCEEEHHHHHHHHHHCCCCCCCCCCC >Mature Secondary Structure PTPEQANVDLVTANKVRDLLSRHGIPPRSQNTTIANVLGLSFSVVTRKMKGLIPWNLSQ CCCCCCCEEEEEHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHH LQDIATHFGVPPAILLDDKGTQPAAADMIDATFVVESRRFRCRAAISTKASSQVETDFVA HHHHHHHCCCCCEEEECCCCCCCHHHHHHHHHHEECCCCCEEHHHHHCCCCCHHHHHHHH SQWQGAWIVTERAHAHQGRTYPVELIELRSAQPTAYAARIAVVDDAPDVAETVCEYFIEK HCCCCEEEEEECHHHCCCCCCCHHHEEECCCCCCEEEEEEEEECCCCHHHHHHHHHHHHC GVNAIPYFDGASFRKALASEDFDAYILDWMLGDQTAAELVRGIRSSENSGAPIFLLTGKI CCCCCCCCCCHHHHHHHHCCCCCCEEHHHHHCCHHHHHHHHHHHCCCCCCCEEEEEECCC STGEASEEEIAHIVSHYNARCEEKPVRLPILFAEVARELKITSPAAAGSS CCCCCCHHHHHHHHHHHCCCCCCCCCEEEHHHHHHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA