Definition | Burkholderia glumae BGR1 chromosome chromosome 2, complete sequence. |
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Accession | NC_012721 |
Length | 2,827,333 |
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The map label for this gene is 238024558
Identifier: 238024558
GI number: 238024558
Start: 1478562
End: 1480136
Strand: Reverse
Name: 238024558
Synonym: bglu_2g11650
Alternate gene names: NA
Gene position: 1480136-1478562 (Counterclockwise)
Preceding gene: 238024559
Following gene: 238024557
Centisome position: 52.35
GC content: 70.03
Gene sequence:
>1575_bases ATGTCCACACCCCCCTCCTGCGCGCTGCCGCGCGCCGCCTCCGCCGACGTGCTGCTGCTGCTCGAGGGCACGTTTCCATA CGTGAGCGGCGGCGTGTCGAGCTGGGTCAACCAGATGATCCGCGCGTTTCCCGAGCAGAGCTTCGCGCTGTGCTTCCTCG GCAGCCGGCCGCAGGACTACACGAAGCAGCACTATGCGCTGCCCGACAACGTGGTGCATCTGGAGACCCACTATCTCTAC GATTTCGCGCCGCCGCCGCTGGTCAAGAAGATGGGCGGCGACGCCGACGCCTTCGCGCGCTCGGCGCAGCTGCACGAGAC GATGCGCAACCCGGCGCTGCGCACGGTGGGCGCGCAGCTGCTCAAGCAGATGCTGGCCGACCTGAAGCCGGGCGGCGCGC TCGCCGAGGACGCCTTCCTCTACTCGAAGCAAGCCTGGGATTACCTGACCGAGCAATACCGGGCGCGCTGCACCGATCCC TCGTTCGTCGACTACTTCTGGACCGTGCGCATCATGCACAAGCCGCTCTGGCAGCTCGCGCGCGTGGCCGAGGGGCTGCC GGCGGGCCGCGTGCTGCACACCGTCTCCACCGGTTACGCGGGCTTCCTGGGGGCGCTCGCGCATTACCGCACCGGGCGCC CGCTGCTGGTGTCCGAGCACGGCATCTACACGAAGGAACGCAAGATCGACCTGTTCCAGAGCGAGTGGATTCGCGACAAT CGCAGCATCTTCGAGCGCGACGTCTCGCAGGTCGGCTACTTCCGCGACCTGTGGGTGCGCTTCTTCCAGGCGCTCGGGCG TGCCTGCTACGACGCGGCCGACGACATCATCGCGCTCTACGAGGGCAACCGGCAGCGCCAGATTCTCGACGGCGCGCCGG CGCCGCGCACCGGCACGATTCCGAACGGCGTGAATCTGGCGCGCCTCGCGCCGCTGCGCGAGCGCCGCGCGGCCGAGGTG CCCAAGACGCTGTGCCTGATCGGCCGCGTGGTGCCGATCAAGGACATCAAGACCTTCATCCGCGCGATGCTGACCGTGCT GCGCCGGATGCCCGAGGCCGAGGCCTGGATCGCCGGCCCCGAGGACGAGGATCTGGCCTACGCGCAGGAGTGCCGCGCGC TGGTGGACAGCCTCGGCCTGAAGGACAAGGTGAAGTTCCTCGGCTTCCAGAAGATCGACGAGCTGCTGCCCAAGTGCGGG CTGCTGGTGCTCAGCTCGATCTCCGAGGCGCTGCCGCTGGTGGTGCTGGAAGGGTTCGCGGCCGGCGTGCCGTCGGTGAC CACCGACGTCGGCTCGTGCCGCCAGCTGATCGAGGGGCTGCCCGGCGAGGACGCCGCGCTCGGCGCGGCCGGGCGCGTGG TGCAGATCGCCGATCCGCGCGCGCTCGCCGAGGCCGCCATCGACCTGTTCGACGACGCCAACTGGCATGCGGCGCAGGCC GCCGGCGTGGCGCGCGTCGAGCGCTACTACACGCAGGACCAGATGGTCGATTCGTACCGCACGCTGTACCGGCGCCTGAT GGACGCGCCGACGCGGCCGGCCGGGGACGGCGCGGCCCTTGCCACGTCGGGTTGA
Upstream 100 bases:
>100_bases GCGATGGAGGCGAGCGGCGTGCCGCCCGCGCTGCGCGCCGCGCTCGAATTCTGGCAGCCGGCCGCGGCCGCGCCGGCGCC GCATGCCGATGAGTGAGCCG
Downstream 100 bases:
>100_bases GGGGAGCGGGCAATCATGGCCGGAATCGGTTTCGAACTGCGCAAGATGCTCCGTCGCAACACGCTGACGGGGCTGATGCA GGCCTATACCTACGCGGGGC
Product: glycosyl transferase
Products: NA
Alternate protein names: Stealth protein SCO2592 [H]
Number of amino acids: Translated: 524; Mature: 523
Protein sequence:
>524_residues MSTPPSCALPRAASADVLLLLEGTFPYVSGGVSSWVNQMIRAFPEQSFALCFLGSRPQDYTKQHYALPDNVVHLETHYLY DFAPPPLVKKMGGDADAFARSAQLHETMRNPALRTVGAQLLKQMLADLKPGGALAEDAFLYSKQAWDYLTEQYRARCTDP SFVDYFWTVRIMHKPLWQLARVAEGLPAGRVLHTVSTGYAGFLGALAHYRTGRPLLVSEHGIYTKERKIDLFQSEWIRDN RSIFERDVSQVGYFRDLWVRFFQALGRACYDAADDIIALYEGNRQRQILDGAPAPRTGTIPNGVNLARLAPLRERRAAEV PKTLCLIGRVVPIKDIKTFIRAMLTVLRRMPEAEAWIAGPEDEDLAYAQECRALVDSLGLKDKVKFLGFQKIDELLPKCG LLVLSSISEALPLVVLEGFAAGVPSVTTDVGSCRQLIEGLPGEDAALGAAGRVVQIADPRALAEAAIDLFDDANWHAAQA AGVARVERYYTQDQMVDSYRTLYRRLMDAPTRPAGDGAALATSG
Sequences:
>Translated_524_residues MSTPPSCALPRAASADVLLLLEGTFPYVSGGVSSWVNQMIRAFPEQSFALCFLGSRPQDYTKQHYALPDNVVHLETHYLY DFAPPPLVKKMGGDADAFARSAQLHETMRNPALRTVGAQLLKQMLADLKPGGALAEDAFLYSKQAWDYLTEQYRARCTDP SFVDYFWTVRIMHKPLWQLARVAEGLPAGRVLHTVSTGYAGFLGALAHYRTGRPLLVSEHGIYTKERKIDLFQSEWIRDN RSIFERDVSQVGYFRDLWVRFFQALGRACYDAADDIIALYEGNRQRQILDGAPAPRTGTIPNGVNLARLAPLRERRAAEV PKTLCLIGRVVPIKDIKTFIRAMLTVLRRMPEAEAWIAGPEDEDLAYAQECRALVDSLGLKDKVKFLGFQKIDELLPKCG LLVLSSISEALPLVVLEGFAAGVPSVTTDVGSCRQLIEGLPGEDAALGAAGRVVQIADPRALAEAAIDLFDDANWHAAQA AGVARVERYYTQDQMVDSYRTLYRRLMDAPTRPAGDGAALATSG >Mature_523_residues STPPSCALPRAASADVLLLLEGTFPYVSGGVSSWVNQMIRAFPEQSFALCFLGSRPQDYTKQHYALPDNVVHLETHYLYD FAPPPLVKKMGGDADAFARSAQLHETMRNPALRTVGAQLLKQMLADLKPGGALAEDAFLYSKQAWDYLTEQYRARCTDPS FVDYFWTVRIMHKPLWQLARVAEGLPAGRVLHTVSTGYAGFLGALAHYRTGRPLLVSEHGIYTKERKIDLFQSEWIRDNR SIFERDVSQVGYFRDLWVRFFQALGRACYDAADDIIALYEGNRQRQILDGAPAPRTGTIPNGVNLARLAPLRERRAAEVP KTLCLIGRVVPIKDIKTFIRAMLTVLRRMPEAEAWIAGPEDEDLAYAQECRALVDSLGLKDKVKFLGFQKIDELLPKCGL LVLSSISEALPLVVLEGFAAGVPSVTTDVGSCRQLIEGLPGEDAALGAAGRVVQIADPRALAEAAIDLFDDANWHAAQAA GVARVERYYTQDQMVDSYRTLYRRLMDAPTRPAGDGAALATSG
Specific function: Unknown
COG id: COG0438
COG function: function code M; Glycosyltransferase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the stealth family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001296 [H]
Pfam domain/function: PF00534 Glycos_transf_1 [H]
EC number: NA
Molecular weight: Translated: 57879; Mature: 57748
Theoretical pI: Translated: 6.78; Mature: 6.78
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTPPSCALPRAASADVLLLLEGTFPYVSGGVSSWVNQMIRAFPEQSFALCFLGSRPQDY CCCCCCCCCCCCCCCCEEEEEECCCCHHCCCHHHHHHHHHHHCCCCCEEEEEECCCCHHH TKQHYALPDNVVHLETHYLYDFAPPPLVKKMGGDADAFARSAQLHETMRNPALRTVGAQL HHHHCCCCCCEEEEEEEEEEECCCCHHHHHCCCCHHHHHHHHHHHHHHHCHHHHHHHHHH LKQMLADLKPGGALAEDAFLYSKQAWDYLTEQYRARCTDPSFVDYFWTVRIMHKPLWQLA HHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHH RVAEGLPAGRVLHTVSTGYAGFLGALAHYRTGRPLLVSEHGIYTKERKIDLFQSEWIRDN HHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCHHHHHHHHHHHHHHHH RSIFERDVSQVGYFRDLWVRFFQALGRACYDAADDIIALYEGNRQRQILDGAPAPRTGTI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEECCCCCCCHHCCCCCCCCCCC PNGVNLARLAPLRERRAAEVPKTLCLIGRVVPIKDIKTFIRAMLTVLRRMPEAEAWIAGP CCCCCHHHHCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCEEECCC EDEDLAYAQECRALVDSLGLKDKVKFLGFQKIDELLPKCGLLVLSSISEALPLVVLEGFA CCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AGVPSVTTDVGSCRQLIEGLPGEDAALGAAGRVVQIADPRALAEAAIDLFDDANWHAAQA CCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEECCCHHHHHHHHHHHCCCCCHHHHH AGVARVERYYTQDQMVDSYRTLYRRLMDAPTRPAGDGAALATSG HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC >Mature Secondary Structure STPPSCALPRAASADVLLLLEGTFPYVSGGVSSWVNQMIRAFPEQSFALCFLGSRPQDY CCCCCCCCCCCCCCCEEEEEECCCCHHCCCHHHHHHHHHHHCCCCCEEEEEECCCCHHH TKQHYALPDNVVHLETHYLYDFAPPPLVKKMGGDADAFARSAQLHETMRNPALRTVGAQL HHHHCCCCCCEEEEEEEEEEECCCCHHHHHCCCCHHHHHHHHHHHHHHHCHHHHHHHHHH LKQMLADLKPGGALAEDAFLYSKQAWDYLTEQYRARCTDPSFVDYFWTVRIMHKPLWQLA HHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHH RVAEGLPAGRVLHTVSTGYAGFLGALAHYRTGRPLLVSEHGIYTKERKIDLFQSEWIRDN HHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCHHHHHHHHHHHHHHHH RSIFERDVSQVGYFRDLWVRFFQALGRACYDAADDIIALYEGNRQRQILDGAPAPRTGTI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEECCCCCCCHHCCCCCCCCCCC PNGVNLARLAPLRERRAAEVPKTLCLIGRVVPIKDIKTFIRAMLTVLRRMPEAEAWIAGP CCCCCHHHHCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCEEECCC EDEDLAYAQECRALVDSLGLKDKVKFLGFQKIDELLPKCGLLVLSSISEALPLVVLEGFA CCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AGVPSVTTDVGSCRQLIEGLPGEDAALGAAGRVVQIADPRALAEAAIDLFDDANWHAAQA CCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEECCCHHHHHHHHHHHCCCCCHHHHH AGVARVERYYTQDQMVDSYRTLYRRLMDAPTRPAGDGAALATSG HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 12000953 [H]