Definition | Burkholderia glumae BGR1 chromosome chromosome 2, complete sequence. |
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Accession | NC_012721 |
Length | 2,827,333 |
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The map label for this gene is 238024557
Identifier: 238024557
GI number: 238024557
Start: 1477176
End: 1478546
Strand: Reverse
Name: 238024557
Synonym: bglu_2g11640
Alternate gene names: NA
Gene position: 1478546-1477176 (Counterclockwise)
Preceding gene: 238024558
Following gene: 238024554
Centisome position: 52.29
GC content: 65.57
Gene sequence:
>1371_bases ATGGCCGGAATCGGTTTCGAACTGCGCAAGATGCTCCGTCGCAACACGCTGACGGGGCTGATGCAGGCCTATACCTACGC GGGGCTGATCGGCGCCGGGCCGTGGGTGCTGTCGATCGTCGGGATTTTGCTGATCGGCGTGCTGAGCGTGCCGTTCGCGC AGCCCAACGGCGCCGTCACCCAGTTCCAGGTGTCGGTCACCTACCTGATCGCGGTGTCGCTGGTGCTGACCGGGCCGCTG CAGCTCTGGTACACGCGTTTCACCTCGGACCGCCTGTTCGAGAAGCGCCGCGACCTGGTGCTGCCGAACTTCCATGCCGT GATGGCGGTGGTGACGGTGGTGTCGGCCGTGGCGGGTGCGCTGCTGGTGCTGTTCGCGTTCGGCGGACAGACCGCCGCCT ACCGGCTGCTGATGCTGGCCGGCTTCGTGGTGATGGGCAACATCTGGATCGCCACCATCTTCCTGTCGGGCATGAAGCGC TACGTGGCGATCATCGTGGTGTTCTTCGTCGGCTACGCGGTTACCACGGCGGCCGCGCTGGCGCTCGCCGGCTTCGGCCT GGCGGGCCTGCTGGCCGGCTTCGTGGCGGGCCAGACGCTGCTGCTGTGCGGCCTGCTCGGGCTGATCTACCGCGACTTCG AGAGCGACCGCTTCATCTCGTTCGAGATCTTCGAGAAGCGCTACCGCTATCCGTCGCTGATGCTGATCGGCTTCCTCTAC AACCTCGGCATCTGGATCGACAAGTTCATGTTCTGGTACACCACCGGCACCGGGCAGCCGGTGATCGGGCCGCTGCGCGC GTCGATCATCTACGACATCCCGGTGTTCCTCGCCTATCTCGCCATCATCCCGGGCATGGCGGTGTTCCTGCTGCGCATCG AGACCGATTTCGTCGAATACTACGACGCGTTCTACGACGCGGTGCGCGGCGGCGCCTCGCTGCAGCACATCGAGCGCATG CAGGGCGCGATGGTGGAGGCGCTGCGCGACGGCGTGTGGGAGATCCTCAAGATCCAGGCGATGGCCGCGCTGCTGCTGTT CGCGGCCGCGCCCACGCTGCTGCAATGGCTGCACATTCCCACCCTGTACCTGCCGCTGCTCTACATCGACGTGATCGCCG CGAGCATGCAGGTGGTGTTCATGGGCGTGATCAACGTGTTCTTCTATCTCGACAAGCGGCGCATCGTGCTGTGGCTGGTG GGCGGCTTCGTGCTGCTGAACGTGGCGCTGACGGCGCTGACGCTGGCCTCGAGCCCGGCCGCCTACGGCTACGGCTTCGC CGGCGCGCTGTTCGTGGTGATGCTGGCGAGCCTCTACTGGCTCGACCGCAAGCTCGAGACGCTCGAATACGAGACCTTCA TGCTGCAGTGA
Upstream 100 bases:
>100_bases TTCGTACCGCACGCTGTACCGGCGCCTGATGGACGCGCCGACGCGGCCGGCCGGGGACGGCGCGGCCCTTGCCACGTCGG GTTGAGGGGAGCGGGCAATC
Downstream 100 bases:
>100_bases GCGCGGCGGCGCGCGCGGCCCGACGCGATGCGCGCCGCCGCCTGCCTGCCGGCAAGGCAAGCCGGGCGGCACGCGCCGGC GCCTGCTACAGCACGTTCAG
Product: putative polysaccharide synthase transmembrane protein ragG
Products: NA
Alternate protein names: Inner Membrane Protein; Polysaccharide Synthase Transmembrane Protein; Transmembrane Protein Cog
Number of amino acids: Translated: 456; Mature: 455
Protein sequence:
>456_residues MAGIGFELRKMLRRNTLTGLMQAYTYAGLIGAGPWVLSIVGILLIGVLSVPFAQPNGAVTQFQVSVTYLIAVSLVLTGPL QLWYTRFTSDRLFEKRRDLVLPNFHAVMAVVTVVSAVAGALLVLFAFGGQTAAYRLLMLAGFVVMGNIWIATIFLSGMKR YVAIIVVFFVGYAVTTAAALALAGFGLAGLLAGFVAGQTLLLCGLLGLIYRDFESDRFISFEIFEKRYRYPSLMLIGFLY NLGIWIDKFMFWYTTGTGQPVIGPLRASIIYDIPVFLAYLAIIPGMAVFLLRIETDFVEYYDAFYDAVRGGASLQHIERM QGAMVEALRDGVWEILKIQAMAALLLFAAAPTLLQWLHIPTLYLPLLYIDVIAASMQVVFMGVINVFFYLDKRRIVLWLV GGFVLLNVALTALTLASSPAAYGYGFAGALFVVMLASLYWLDRKLETLEYETFMLQ
Sequences:
>Translated_456_residues MAGIGFELRKMLRRNTLTGLMQAYTYAGLIGAGPWVLSIVGILLIGVLSVPFAQPNGAVTQFQVSVTYLIAVSLVLTGPL QLWYTRFTSDRLFEKRRDLVLPNFHAVMAVVTVVSAVAGALLVLFAFGGQTAAYRLLMLAGFVVMGNIWIATIFLSGMKR YVAIIVVFFVGYAVTTAAALALAGFGLAGLLAGFVAGQTLLLCGLLGLIYRDFESDRFISFEIFEKRYRYPSLMLIGFLY NLGIWIDKFMFWYTTGTGQPVIGPLRASIIYDIPVFLAYLAIIPGMAVFLLRIETDFVEYYDAFYDAVRGGASLQHIERM QGAMVEALRDGVWEILKIQAMAALLLFAAAPTLLQWLHIPTLYLPLLYIDVIAASMQVVFMGVINVFFYLDKRRIVLWLV GGFVLLNVALTALTLASSPAAYGYGFAGALFVVMLASLYWLDRKLETLEYETFMLQ >Mature_455_residues AGIGFELRKMLRRNTLTGLMQAYTYAGLIGAGPWVLSIVGILLIGVLSVPFAQPNGAVTQFQVSVTYLIAVSLVLTGPLQ LWYTRFTSDRLFEKRRDLVLPNFHAVMAVVTVVSAVAGALLVLFAFGGQTAAYRLLMLAGFVVMGNIWIATIFLSGMKRY VAIIVVFFVGYAVTTAAALALAGFGLAGLLAGFVAGQTLLLCGLLGLIYRDFESDRFISFEIFEKRYRYPSLMLIGFLYN LGIWIDKFMFWYTTGTGQPVIGPLRASIIYDIPVFLAYLAIIPGMAVFLLRIETDFVEYYDAFYDAVRGGASLQHIERMQ GAMVEALRDGVWEILKIQAMAALLLFAAAPTLLQWLHIPTLYLPLLYIDVIAASMQVVFMGVINVFFYLDKRRIVLWLVG GFVLLNVALTALTLASSPAAYGYGFAGALFVVMLASLYWLDRKLETLEYETFMLQ
Specific function: Unknown
COG id: COG4267
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 50474; Mature: 50343
Theoretical pI: Translated: 8.92; Mature: 8.92
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAGIGFELRKMLRRNTLTGLMQAYTYAGLIGAGPWVLSIVGILLIGVLSVPFAQPNGAVT CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCCCE QFQVSVTYLIAVSLVLTGPLQLWYTRFTSDRLFEKRRDLVLPNFHAVMAVVTVVSAVAGA EEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHH LLVLFAFGGQTAAYRLLMLAGFVVMGNIWIATIFLSGMKRYVAIIVVFFVGYAVTTAAAL HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ALAGFGLAGLLAGFVAGQTLLLCGLLGLIYRDFESDRFISFEIFEKRYRYPSLMLIGFLY HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHCCCHHHHHHHHH NLGIWIDKFMFWYTTGTGQPVIGPLRASIIYDIPVFLAYLAIIPGMAVFLLRIETDFVEY HHHHHHHHHHHHEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH YDAFYDAVRGGASLQHIERMQGAMVEALRDGVWEILKIQAMAALLLFAAAPTLLQWLHIP HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TLYLPLLYIDVIAASMQVVFMGVINVFFYLDKRRIVLWLVGGFVLLNVALTALTLASSPA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCC AYGYGFAGALFVVMLASLYWLDRKLETLEYETFMLQ CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure AGIGFELRKMLRRNTLTGLMQAYTYAGLIGAGPWVLSIVGILLIGVLSVPFAQPNGAVT CCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCCCE QFQVSVTYLIAVSLVLTGPLQLWYTRFTSDRLFEKRRDLVLPNFHAVMAVVTVVSAVAGA EEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHH LLVLFAFGGQTAAYRLLMLAGFVVMGNIWIATIFLSGMKRYVAIIVVFFVGYAVTTAAAL HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ALAGFGLAGLLAGFVAGQTLLLCGLLGLIYRDFESDRFISFEIFEKRYRYPSLMLIGFLY HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHCCCHHHHHHHHH NLGIWIDKFMFWYTTGTGQPVIGPLRASIIYDIPVFLAYLAIIPGMAVFLLRIETDFVEY HHHHHHHHHHHHEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH YDAFYDAVRGGASLQHIERMQGAMVEALRDGVWEILKIQAMAALLLFAAAPTLLQWLHIP HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TLYLPLLYIDVIAASMQVVFMGVINVFFYLDKRRIVLWLVGGFVLLNVALTALTLASSPA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCC AYGYGFAGALFVVMLASLYWLDRKLETLEYETFMLQ CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA