| Definition | Brucella suis 1330 chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_004310 |
| Length | 2,107,794 |
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The map label for this gene is lon [H]
Identifier: 23501984
GI number: 23501984
Start: 1081108
End: 1083546
Strand: Reverse
Name: lon [H]
Synonym: BR1106
Alternate gene names: 23501984
Gene position: 1083546-1081108 (Counterclockwise)
Preceding gene: 23501986
Following gene: 23501983
Centisome position: 51.41
GC content: 56.83
Gene sequence:
>2439_bases ATGACGGGTATTGAACAGAAAACACCGGTTGGTGGTTCTGAAACGGGTGGTGCGGACGGGCTCTATGCTGTCTTGCCGCT GCGTGACATCGTCGTCTTTCCCCATATGATCGTCCCGCTTTTTGTGGGCCGCGAAAAATCCATTCGCGCGCTTGAAGAAG TGATGGGCGTTGACAAGCAGATATTGCTTGCCACCCAGAAGAACGCTGCCGATGACGATCCGGCGCCGGACGCGATCTAT GAGATTGGTACGATCGCCAATGTGTTGCAGCTTCTGAAACTGCCGGACGGCACCGTCAAGGTGCTGGTCGAAGGCACGGC ACGCGCCAAAATTTCCAAGTTTACCGATCGTGAAGATTATCACGAGGCTTATGCTGCGGCTCTGCAGGAGCCGGAGGAAG ATGCTGTCGAGATCGAGGCACTGGCCCGCTCGGTGGTTTCCGACTTTGAAAATTACGTCAAGCTGAACAAGAAGATTTCG CCGGAAGTGGTTGGCGCGGCCAGCCAGATCGACGATTATTCCAAGCTTGCCGATACGGTTGCCTCGCACCTTGCGATCAA AATCCCTGAAAAGCAGGAAATGCTGTCGGTTCTTTCGGTGCGCGAGCGCCTTGAGAAAGCCCTTTCCTTCATGGAAGCCG AAATTTCTGTTCTACAGGTTGAGAAGCGTATTCGCAGCCGCGTCAAGCGCCAGATGGAGAAGACGCAGCGCGAATATTAT CTCAATGAGCAGATGAAGGCGATCCAGAAGGAGCTTGGCGACAGTGAGGACGGCCGTGATGAAGTGGCCGAAATCGAAGA GCGCATCACCAAGACCAAGCTCAGCAAGGAAGCGCGCGAAAAAGCTCTGGCCGAGCTGAAGAAACTGCGCAGCATGAGCC CGATGTCCGCTGAAGCGACGGTGGTTCGCAATTATCTCGACTGGTTGCTCTCCATTCCATGGGGCAAGAAGTCGAAGGTG AAGCAGGATCTGAACTTTGCGCAGGAAGTGCTGGATGCGGAGCATTTCGGCCTTGGCAAGGTCAAGGAACGCATCGTCGG ATATCTGGCGGTGCAGGCCCGTTCGACCAAGATCAAGGGTCCGATCCTCTGCCTCGTTGGCCCTCCCGGCGTCGGCAAGA CCTCGCTTGCGCGCTCGATTGCCAAGGCAACGGGCCGCGAATATGTCCGCATGTCGCTTGGCGGCGTACGCGACGAGGCT GAAATCCGCGGTCATCGCCGCACCTATATCGGCTCGATGCCCGGCAAGGTCATCCAGTCGATGAAGAAGGCGAAGAAGTC CAATCCGCTTTTCCTGCTCGATGAAATCGACAAGATGGGCCAGGATTTCCGCGGCGATCCGTCTTCGGCCATGCTGGAGG TGCTGGACCCGGAACAGAACGCGACCTTCATGGATCACTACCTTGAAGTTGAGTATGATCTATCGAACGTCATGTTCGTG ACGACCGCCAATACGATGAATATTCCCGGTCCACTTCTGGATCGTATGGAGATCATCCGTATCGCCGGTTACACGGAAGA CGAAAAGCTGGAGATCGCCAAGCGGCACCTGTTGCCGAAGGCCATCAAGGACCATGCCCTGCAACCGAAGGAGTTTTCGG TTACGGAAGATGCGCTGCGCAACGTTATCCGCCATTATACGCGGGAAGCGGGCGTGCGTAGCCTTGAACGCGAGGTGATG ACCCTTGCGCGCAAGGCCGTGACGGAAATCCTGAAGACGAAGAAGAAGTCGGTAAAGATTACCGACAAGAACCTCTCCGA TTACCTTGGTGTGGAGAAGTTCCGCTTCGGTCAGATCGACGGTGAAGATCAGGTGGGTGTCGTGACTGGCCTTGCCTGGA CCGAAGTCGGCGGTGAGCTTTTGACCATCGAAGGCGTCATGATGCCGGGTAAGGGCCGCATGACGGTTACGGGTAATCTC CGTGACGTGATGAAGGAATCGATTTCGGCCGCGGCATCCTATGTCCGCTCGCGCGCGATCGATTTCGGCATCGAGCCTCC GCTGTTCGACAAGCGCGATATCCACGTGCACGTGCCGGAAGGCGCGACGCCGAAGGATGGTCCTTCTGCCGGTATCGCCA TGGTTACGGCCATCGTCTCCGTGCTGACGGGTATTCCCGTTCGCAAGGACATCGCCATGACGGGTGAAGTCACGTTGCGC GGTCGGGTTCTGCCAATCGGCGGGTTGAAGGAAAAGCTGCTTGCGGCCTTGCGCGGCGGTATCAAGAAGGTTCTGATCCC GGAAGAGAACGCCAAGGATCTGGCGGAAATCCCGGACAATGTGAAGAACAATCTTGAGATCGTTCCGGTATCCCGCGTCG GTGAAGTGCTGAAGCACACGCTCGTGCGCCAGCCTGAACCGATTGAATGGACCGAGCAGGAGAATCCCACTGCCGTGCCT CCGGTGGAGGATGAAGCAGGGGCTTCGCTGGCCCATTAA
Upstream 100 bases:
>100_bases CTCCAAGTATGGACCGAAGCACGCTTTGTGACCTGCCTCACGACAAAAGGGGGCATAGGCGTGGCAGTCGGGTCGGAAGG CCCGAGAAAGGACTAGTGTT
Downstream 100 bases:
>100_bases GGGCACTTGATGTGCCCTGATAATCGAAATGCCGGGCTTCAAGCCCGGCATTTCTGTGTTTAACCCCGGTTTTCCGGGGT TTTTTAGTGTTGACAGGCTT
Product: ATP-dependent protease La
Products: NA
Alternate protein names: ATP-dependent protease La [H]
Number of amino acids: Translated: 812; Mature: 811
Protein sequence:
>812_residues MTGIEQKTPVGGSETGGADGLYAVLPLRDIVVFPHMIVPLFVGREKSIRALEEVMGVDKQILLATQKNAADDDPAPDAIY EIGTIANVLQLLKLPDGTVKVLVEGTARAKISKFTDREDYHEAYAAALQEPEEDAVEIEALARSVVSDFENYVKLNKKIS PEVVGAASQIDDYSKLADTVASHLAIKIPEKQEMLSVLSVRERLEKALSFMEAEISVLQVEKRIRSRVKRQMEKTQREYY LNEQMKAIQKELGDSEDGRDEVAEIEERITKTKLSKEAREKALAELKKLRSMSPMSAEATVVRNYLDWLLSIPWGKKSKV KQDLNFAQEVLDAEHFGLGKVKERIVGYLAVQARSTKIKGPILCLVGPPGVGKTSLARSIAKATGREYVRMSLGGVRDEA EIRGHRRTYIGSMPGKVIQSMKKAKKSNPLFLLDEIDKMGQDFRGDPSSAMLEVLDPEQNATFMDHYLEVEYDLSNVMFV TTANTMNIPGPLLDRMEIIRIAGYTEDEKLEIAKRHLLPKAIKDHALQPKEFSVTEDALRNVIRHYTREAGVRSLEREVM TLARKAVTEILKTKKKSVKITDKNLSDYLGVEKFRFGQIDGEDQVGVVTGLAWTEVGGELLTIEGVMMPGKGRMTVTGNL RDVMKESISAAASYVRSRAIDFGIEPPLFDKRDIHVHVPEGATPKDGPSAGIAMVTAIVSVLTGIPVRKDIAMTGEVTLR GRVLPIGGLKEKLLAALRGGIKKVLIPEENAKDLAEIPDNVKNNLEIVPVSRVGEVLKHTLVRQPEPIEWTEQENPTAVP PVEDEAGASLAH
Sequences:
>Translated_812_residues MTGIEQKTPVGGSETGGADGLYAVLPLRDIVVFPHMIVPLFVGREKSIRALEEVMGVDKQILLATQKNAADDDPAPDAIY EIGTIANVLQLLKLPDGTVKVLVEGTARAKISKFTDREDYHEAYAAALQEPEEDAVEIEALARSVVSDFENYVKLNKKIS PEVVGAASQIDDYSKLADTVASHLAIKIPEKQEMLSVLSVRERLEKALSFMEAEISVLQVEKRIRSRVKRQMEKTQREYY LNEQMKAIQKELGDSEDGRDEVAEIEERITKTKLSKEAREKALAELKKLRSMSPMSAEATVVRNYLDWLLSIPWGKKSKV KQDLNFAQEVLDAEHFGLGKVKERIVGYLAVQARSTKIKGPILCLVGPPGVGKTSLARSIAKATGREYVRMSLGGVRDEA EIRGHRRTYIGSMPGKVIQSMKKAKKSNPLFLLDEIDKMGQDFRGDPSSAMLEVLDPEQNATFMDHYLEVEYDLSNVMFV TTANTMNIPGPLLDRMEIIRIAGYTEDEKLEIAKRHLLPKAIKDHALQPKEFSVTEDALRNVIRHYTREAGVRSLEREVM TLARKAVTEILKTKKKSVKITDKNLSDYLGVEKFRFGQIDGEDQVGVVTGLAWTEVGGELLTIEGVMMPGKGRMTVTGNL RDVMKESISAAASYVRSRAIDFGIEPPLFDKRDIHVHVPEGATPKDGPSAGIAMVTAIVSVLTGIPVRKDIAMTGEVTLR GRVLPIGGLKEKLLAALRGGIKKVLIPEENAKDLAEIPDNVKNNLEIVPVSRVGEVLKHTLVRQPEPIEWTEQENPTAVP PVEDEAGASLAH >Mature_811_residues TGIEQKTPVGGSETGGADGLYAVLPLRDIVVFPHMIVPLFVGREKSIRALEEVMGVDKQILLATQKNAADDDPAPDAIYE IGTIANVLQLLKLPDGTVKVLVEGTARAKISKFTDREDYHEAYAAALQEPEEDAVEIEALARSVVSDFENYVKLNKKISP EVVGAASQIDDYSKLADTVASHLAIKIPEKQEMLSVLSVRERLEKALSFMEAEISVLQVEKRIRSRVKRQMEKTQREYYL NEQMKAIQKELGDSEDGRDEVAEIEERITKTKLSKEAREKALAELKKLRSMSPMSAEATVVRNYLDWLLSIPWGKKSKVK QDLNFAQEVLDAEHFGLGKVKERIVGYLAVQARSTKIKGPILCLVGPPGVGKTSLARSIAKATGREYVRMSLGGVRDEAE IRGHRRTYIGSMPGKVIQSMKKAKKSNPLFLLDEIDKMGQDFRGDPSSAMLEVLDPEQNATFMDHYLEVEYDLSNVMFVT TANTMNIPGPLLDRMEIIRIAGYTEDEKLEIAKRHLLPKAIKDHALQPKEFSVTEDALRNVIRHYTREAGVRSLEREVMT LARKAVTEILKTKKKSVKITDKNLSDYLGVEKFRFGQIDGEDQVGVVTGLAWTEVGGELLTIEGVMMPGKGRMTVTGNLR DVMKESISAAASYVRSRAIDFGIEPPLFDKRDIHVHVPEGATPKDGPSAGIAMVTAIVSVLTGIPVRKDIAMTGEVTLRG RVLPIGGLKEKLLAALRGGIKKVLIPEENAKDLAEIPDNVKNNLEIVPVSRVGEVLKHTLVRQPEPIEWTEQENPTAVPP VEDEAGASLAH
Specific function: ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced
COG id: COG0466
COG function: function code O; ATP-dependent Lon protease, bacterial type
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 Lon domain [H]
Homologues:
Organism=Homo sapiens, GI21396489, Length=656, Percent_Identity=42.8353658536585, Blast_Score=530, Evalue=1e-150, Organism=Homo sapiens, GI31377667, Length=771, Percent_Identity=37.8728923476005, Blast_Score=508, Evalue=1e-144, Organism=Escherichia coli, GI1786643, Length=765, Percent_Identity=64.9673202614379, Blast_Score=1004, Evalue=0.0, Organism=Caenorhabditis elegans, GI17505831, Length=700, Percent_Identity=41, Blast_Score=514, Evalue=1e-146, Organism=Caenorhabditis elegans, GI17556486, Length=737, Percent_Identity=33.921302578019, Blast_Score=422, Evalue=1e-118, Organism=Saccharomyces cerevisiae, GI6319449, Length=714, Percent_Identity=39.6358543417367, Blast_Score=508, Evalue=1e-144, Organism=Drosophila melanogaster, GI221513036, Length=650, Percent_Identity=43.5384615384615, Blast_Score=534, Evalue=1e-151, Organism=Drosophila melanogaster, GI24666867, Length=650, Percent_Identity=43.5384615384615, Blast_Score=533, Evalue=1e-151,
Paralogues:
None
Copy number: 2,000 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003593 - InterPro: IPR003959 - InterPro: IPR008269 - InterPro: IPR004815 - InterPro: IPR003111 - InterPro: IPR008268 - InterPro: IPR001984 - InterPro: IPR015947 - InterPro: IPR020568 [H]
Pfam domain/function: PF00004 AAA; PF02190 LON; PF05362 Lon_C [H]
EC number: =3.4.21.53 [H]
Molecular weight: Translated: 89796; Mature: 89665
Theoretical pI: Translated: 6.37; Mature: 6.37
Prosite motif: PS01046 LON_SER
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.1 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.1 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTGIEQKTPVGGSETGGADGLYAVLPLRDIVVFPHMIVPLFVGREKSIRALEEVMGVDKQ CCCCCCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCE ILLATQKNAADDDPAPDAIYEIGTIANVLQLLKLPDGTVKVLVEGTARAKISKFTDREDY EEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEEECCHHHHHHHHCCHHHH HEAYAAALQEPEEDAVEIEALARSVVSDFENYVKLNKKISPEVVGAASQIDDYSKLADTV HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCHHHHHHHHHHHHHH ASHLAIKIPEKQEMLSVLSVRERLEKALSFMEAEISVLQVEKRIRSRVKRQMEKTQREYY HHHHEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LNEQMKAIQKELGDSEDGRDEVAEIEERITKTKLSKEAREKALAELKKLRSMSPMSAEAT HHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHH VVRNYLDWLLSIPWGKKSKVKQDLNFAQEVLDAEHFGLGKVKERIVGYLAVQARSTKIKG HHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHEEECCCCCCC PILCLVGPPGVGKTSLARSIAKATGREYVRMSLGGVRDEAEIRGHRRTYIGSMPGKVIQS CEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCHHHHCCCCCHHHHHH MKKAKKSNPLFLLDEIDKMGQDFRGDPSSAMLEVLDPEQNATFMDHYLEVEYDLSNVMFV HHHHHCCCCEEEEHHHHHHCCCCCCCCHHHHHHHCCCCCCCHHHHHHEEEEECCCCEEEE TTANTMNIPGPLLDRMEIIRIAGYTEDEKLEIAKRHLLPKAIKDHALQPKEFSVTEDALR EECCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHCHHHHHHHCCCCCCCCCHHHHHH NVIRHYTREAGVRSLEREVMTLARKAVTEILKTKKKSVKITDKNLSDYLGVEKFRFGQID HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCHHHHCCHHHCCCCCC GEDQVGVVTGLAWTEVGGELLTIEGVMMPGKGRMTVTGNLRDVMKESISAAASYVRSRAI CCCCCEEEECCHHHHCCCEEEEEEEEEECCCCCEEEECCHHHHHHHHHHHHHHHHHHHHH DFGIEPPLFDKRDIHVHVPEGATPKDGPSAGIAMVTAIVSVLTGIPVRKDIAMTGEVTLR CCCCCCCCCCCCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCEEEECCEEEE GRVLPIGGLKEKLLAALRGGIKKVLIPEENAKDLAEIPDNVKNNLEIVPVSRVGEVLKHT EEEEECCCHHHHHHHHHHCCCEEEECCCCCCHHHHHCCHHHHCCCEEEEHHHHHHHHHHH LVRQPEPIEWTEQENPTAVPPVEDEAGASLAH HHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure TGIEQKTPVGGSETGGADGLYAVLPLRDIVVFPHMIVPLFVGREKSIRALEEVMGVDKQ CCCCCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCE ILLATQKNAADDDPAPDAIYEIGTIANVLQLLKLPDGTVKVLVEGTARAKISKFTDREDY EEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEEECCHHHHHHHHCCHHHH HEAYAAALQEPEEDAVEIEALARSVVSDFENYVKLNKKISPEVVGAASQIDDYSKLADTV HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCHHHHHHHHHHHHHH ASHLAIKIPEKQEMLSVLSVRERLEKALSFMEAEISVLQVEKRIRSRVKRQMEKTQREYY HHHHEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LNEQMKAIQKELGDSEDGRDEVAEIEERITKTKLSKEAREKALAELKKLRSMSPMSAEAT HHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHH VVRNYLDWLLSIPWGKKSKVKQDLNFAQEVLDAEHFGLGKVKERIVGYLAVQARSTKIKG HHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHEEECCCCCCC PILCLVGPPGVGKTSLARSIAKATGREYVRMSLGGVRDEAEIRGHRRTYIGSMPGKVIQS CEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCHHHHCCCCCHHHHHH MKKAKKSNPLFLLDEIDKMGQDFRGDPSSAMLEVLDPEQNATFMDHYLEVEYDLSNVMFV HHHHHCCCCEEEEHHHHHHCCCCCCCCHHHHHHHCCCCCCCHHHHHHEEEEECCCCEEEE TTANTMNIPGPLLDRMEIIRIAGYTEDEKLEIAKRHLLPKAIKDHALQPKEFSVTEDALR EECCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHCHHHHHHHCCCCCCCCCHHHHHH NVIRHYTREAGVRSLEREVMTLARKAVTEILKTKKKSVKITDKNLSDYLGVEKFRFGQID HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCHHHHCCHHHCCCCCC GEDQVGVVTGLAWTEVGGELLTIEGVMMPGKGRMTVTGNLRDVMKESISAAASYVRSRAI CCCCCEEEECCHHHHCCCEEEEEEEEEECCCCCEEEECCHHHHHHHHHHHHHHHHHHHHH DFGIEPPLFDKRDIHVHVPEGATPKDGPSAGIAMVTAIVSVLTGIPVRKDIAMTGEVTLR CCCCCCCCCCCCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCEEEECCEEEE GRVLPIGGLKEKLLAALRGGIKKVLIPEENAKDLAEIPDNVKNNLEIVPVSRVGEVLKHT EEEEECCCHHHHHHHHHHCCCEEEECCCCCCHHHHHCCHHHHCCCEEEEHHHHHHHHHHH LVRQPEPIEWTEQENPTAVPPVEDEAGASLAH HHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA