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The map label for this gene is ygbK [C]

Identifier: 23100715

GI number: 23100715

Start: 3395955

End: 3397295

Strand: Reverse

Name: ygbK [C]

Synonym: OB3260

Alternate gene names: 23100715

Gene position: 3397295-3395955 (Counterclockwise)

Preceding gene: 23100716

Following gene: 23100714

Centisome position: 93.58

GC content: 37.96

Gene sequence:

>1341_bases
ATGAAAAGGCTTTTATTAGGGTTTTATGGTGATGATTTCACCGGATCAACGGATGCAATGGAAGCACTGGATCAATACGG
TTTGAAAACAATACTTTTTCTCAAGATTCCAGACCAGGAAATGATCGATCGCTTTCGACACGTAGATTGTATAGGGGTTG
CAGGAACTGCTAGAGCAAAAGGTACCAAGGGTATGGAGGAAGAATTGTCTCCAGTCTATGAATTCTTACGTCAACTAAAT
CCAACCTTTGTCCATTATAAAGTTTGTTCTACATTCGACTCTGCTCCAGAGGTTGGGAGTATCGGTTTTGCTATTGATAT
AGCAAGAAACTATTTTACAAAAGGAAGTTATCCACTTCTTGTAGCAGCCCCGAATTTGGGAAGGTATACAGTCTTTGGTG
AACATTTTGCAAAATTCCAGGAAGAAATATATCGATTGGATAAACATCCAGTGATGTCCAAACATCCAGTTACTCCAATG
GATGAGGCAGATTTAGCAAAACATTTGCAAGCGCAGACAAAACAAAAGATCGCAAAAGTAAATGTATTAGATTTAGAGGC
TAACACTGCCCAACAAATAATAAATCAAGAAAATAATGAAGCTGATATTATACTCTATGATGCATTGAATGCTTCTCACA
TGAAAAAAGTTTCAGAAGTATTGTGGGAAAAGCGAAGCGATGAGCCTCAGTTTATAGTCGGATCATCCGGTGTAGAATAT
GCAATTGGCGATGCAGTAAGACGGGAAGGCGTAATAGCAAAAGAAAATAAAGCCACCAGTCCAAGCAATGTTCATCAACT
ATTCGCTGTTTCTGGAAGTGTCTCTGATGTAACAAAGCAACAATTAGAGAATGCAGAAGAAGCTGGGTTTGAATTAATTC
AAATACCATTTGAAATGTATACAGATCCTTCTCTCGTTGAAGCATTCTTAGATAACATCATTCAGCAAATAGAAGAAAAG
AAAAAAGTAATAATGTATACAGCAAAAGGTAACGAGGATCCAATTATTGCTCGTACAAAAGAGCATCTACTAAATAACGG
CATCAATAAACAAGATATAGGCATATACATTGGCGAAAAATTAGGCGAGTGGACAAAGTCAGTTATTGATCGAGCTGATT
TGCGAAGAGTAATCATATCTGGTGGTGACACATCGGGCTTTGTTACTTCAAATCTTGATATTTATGGACTAGAAGTGCTC
GATTCTATTGCGCCCGGGGCACCTTTATGTATAGCATATTCAGAGAGAGCAAAATATGATGGACTAGAAATTGCATTAAA
GAGTGGTCAACTTGGAGGACCAGCGTTTTTCGAGAAAGTCTATCAGTCAGGCTCTAAATAA

Upstream 100 bases:

>100_bases
TAAAAATAATTTTCGGATTATTGACAGTTTTTCAGTTAACTGTTAATATCTTTTTTAGATACAACATAGATCTAAGTTAG
ATATTTTGGTGGTGATAAGG

Downstream 100 bases:

>100_bases
TTTTGTTAAAGGATGTATTTGAATATGTTATTAAAAGACGTTGCCTATCAGGAAATAAAATCCAAAATTTTAGAAGAGCA
TTATGAAGCGGGACAATTTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 446; Mature: 446

Protein sequence:

>446_residues
MKRLLLGFYGDDFTGSTDAMEALDQYGLKTILFLKIPDQEMIDRFRHVDCIGVAGTARAKGTKGMEEELSPVYEFLRQLN
PTFVHYKVCSTFDSAPEVGSIGFAIDIARNYFTKGSYPLLVAAPNLGRYTVFGEHFAKFQEEIYRLDKHPVMSKHPVTPM
DEADLAKHLQAQTKQKIAKVNVLDLEANTAQQIINQENNEADIILYDALNASHMKKVSEVLWEKRSDEPQFIVGSSGVEY
AIGDAVRREGVIAKENKATSPSNVHQLFAVSGSVSDVTKQQLENAEEAGFELIQIPFEMYTDPSLVEAFLDNIIQQIEEK
KKVIMYTAKGNEDPIIARTKEHLLNNGINKQDIGIYIGEKLGEWTKSVIDRADLRRVIISGGDTSGFVTSNLDIYGLEVL
DSIAPGAPLCIAYSERAKYDGLEIALKSGQLGGPAFFEKVYQSGSK

Sequences:

>Translated_446_residues
MKRLLLGFYGDDFTGSTDAMEALDQYGLKTILFLKIPDQEMIDRFRHVDCIGVAGTARAKGTKGMEEELSPVYEFLRQLN
PTFVHYKVCSTFDSAPEVGSIGFAIDIARNYFTKGSYPLLVAAPNLGRYTVFGEHFAKFQEEIYRLDKHPVMSKHPVTPM
DEADLAKHLQAQTKQKIAKVNVLDLEANTAQQIINQENNEADIILYDALNASHMKKVSEVLWEKRSDEPQFIVGSSGVEY
AIGDAVRREGVIAKENKATSPSNVHQLFAVSGSVSDVTKQQLENAEEAGFELIQIPFEMYTDPSLVEAFLDNIIQQIEEK
KKVIMYTAKGNEDPIIARTKEHLLNNGINKQDIGIYIGEKLGEWTKSVIDRADLRRVIISGGDTSGFVTSNLDIYGLEVL
DSIAPGAPLCIAYSERAKYDGLEIALKSGQLGGPAFFEKVYQSGSK
>Mature_446_residues
MKRLLLGFYGDDFTGSTDAMEALDQYGLKTILFLKIPDQEMIDRFRHVDCIGVAGTARAKGTKGMEEELSPVYEFLRQLN
PTFVHYKVCSTFDSAPEVGSIGFAIDIARNYFTKGSYPLLVAAPNLGRYTVFGEHFAKFQEEIYRLDKHPVMSKHPVTPM
DEADLAKHLQAQTKQKIAKVNVLDLEANTAQQIINQENNEADIILYDALNASHMKKVSEVLWEKRSDEPQFIVGSSGVEY
AIGDAVRREGVIAKENKATSPSNVHQLFAVSGSVSDVTKQQLENAEEAGFELIQIPFEMYTDPSLVEAFLDNIIQQIEEK
KKVIMYTAKGNEDPIIARTKEHLLNNGINKQDIGIYIGEKLGEWTKSVIDRADLRRVIISGGDTSGFVTSNLDIYGLEVL
DSIAPGAPLCIAYSERAKYDGLEIALKSGQLGGPAFFEKVYQSGSK

Specific function: Unknown

COG id: COG3395

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To E.coli ygbK [H]

Homologues:

Organism=Escherichia coli, GI1789093, Length=419, Percent_Identity=24.8210023866348, Blast_Score=79, Evalue=6e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010737 [H]

Pfam domain/function: PF07005 DUF1537 [H]

EC number: NA

Molecular weight: Translated: 49537; Mature: 49537

Theoretical pI: Translated: 4.92; Mature: 4.92

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRLLLGFYGDDFTGSTDAMEALDQYGLKTILFLKIPDQEMIDRFRHVDCIGVAGTARAK
CCCEEEEECCCCCCCCHHHHHHHHHCCCEEEEEEECCCHHHHHHHHCCEEEECCCCCCCC
GTKGMEEELSPVYEFLRQLNPTFVHYKVCSTFDSAPEVGSIGFAIDIARNYFTKGSYPLL
CCCCHHHHHHHHHHHHHHCCCCEEEEEHHHCCCCCCCCCCCCEEEEEHHHHHCCCCCEEE
VAAPNLGRYTVFGEHFAKFQEEIYRLDKHPVMSKHPVTPMDEADLAKHLQAQTKQKIAKV
EECCCCCCEEEHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHE
NVLDLEANTAQQIINQENNEADIILYDALNASHMKKVSEVLWEKRSDEPQFIVGSSGVEY
EEEEECCHHHHHHHCCCCCCCCEEEEECCCHHHHHHHHHHHHHCCCCCCCEEECCCCCCH
AIGDAVRREGVIAKENKATSPSNVHQLFAVSGSVSDVTKQQLENAEEAGFELIQIPFEMY
HHHHHHHHCCCEECCCCCCCCHHHHHHEEECCCHHHHHHHHHHCHHHCCCEEEEECHHHC
TDPSLVEAFLDNIIQQIEEKKKVIMYTAKGNEDPIIARTKEHLLNNGINKQDIGIYIGEK
CCHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCEEEHHHHHHHHCCCCCCCCEEEECHH
LGEWTKSVIDRADLRRVIISGGDTSGFVTSNLDIYGLEVLDSIAPGAPLCIAYSERAKYD
HHHHHHHHHHHHHHHEEEEECCCCCCEEECCCCEEHHHHHHHHCCCCCEEEEECCCCCCC
GLEIALKSGQLGGPAFFEKVYQSGSK
CEEEEEECCCCCCHHHHHHHHHCCCC
>Mature Secondary Structure
MKRLLLGFYGDDFTGSTDAMEALDQYGLKTILFLKIPDQEMIDRFRHVDCIGVAGTARAK
CCCEEEEECCCCCCCCHHHHHHHHHCCCEEEEEEECCCHHHHHHHHCCEEEECCCCCCCC
GTKGMEEELSPVYEFLRQLNPTFVHYKVCSTFDSAPEVGSIGFAIDIARNYFTKGSYPLL
CCCCHHHHHHHHHHHHHHCCCCEEEEEHHHCCCCCCCCCCCCEEEEEHHHHHCCCCCEEE
VAAPNLGRYTVFGEHFAKFQEEIYRLDKHPVMSKHPVTPMDEADLAKHLQAQTKQKIAKV
EECCCCCCEEEHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHE
NVLDLEANTAQQIINQENNEADIILYDALNASHMKKVSEVLWEKRSDEPQFIVGSSGVEY
EEEEECCHHHHHHHCCCCCCCCEEEEECCCHHHHHHHHHHHHHCCCCCCCEEECCCCCCH
AIGDAVRREGVIAKENKATSPSNVHQLFAVSGSVSDVTKQQLENAEEAGFELIQIPFEMY
HHHHHHHHCCCEECCCCCCCCHHHHHHEEECCCHHHHHHHHHHCHHHCCCEEEEECHHHC
TDPSLVEAFLDNIIQQIEEKKKVIMYTAKGNEDPIIARTKEHLLNNGINKQDIGIYIGEK
CCHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCEEEHHHHHHHHCCCCCCCCEEEECHH
LGEWTKSVIDRADLRRVIISGGDTSGFVTSNLDIYGLEVLDSIAPGAPLCIAYSERAKYD
HHHHHHHHHHHHHHHEEEEECCCCCCEEECCCCEEHHHHHHHHCCCCCEEEEECCCCCCC
GLEIALKSGQLGGPAFFEKVYQSGSK
CEEEEEECCCCCCHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]