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The map label for this gene is gerM [H]

Identifier: 23099562

GI number: 23099562

Start: 2141258

End: 2142316

Strand: Reverse

Name: gerM [H]

Synonym: OB2107

Alternate gene names: 23099562

Gene position: 2142316-2141258 (Counterclockwise)

Preceding gene: 23099563

Following gene: 23099561

Centisome position: 59.01

GC content: 35.51

Gene sequence:

>1059_bases
ATGAAAAAGCGATTAATGCTATTAGCGGGGTCAATCGGTATTGTTACTATTTTATCTGGGTGTTTTGAAGGAGAGCAATC
ACAAACTGAAATTGATCCACCTCAAAACGCACAGGAAGTAGATAATCTTGACAAAGTAGATGAGGAAGATGTTTCAGCTA
CACCTGAAGAAACGGCTGATACTGTATCTAGAGACTTATATCTCCTAGATGCAAATGGTATGGTTGCTTCTCAAACATTA
GAACTTCCAGTACCAGACACAAATGAAGTTGCAGCACAAGTACTAGAGCATCTAGTTAAAGGTGGACCAGTAACACCACT
TCTTCCTAATGGCTTCCAAGCAGTGCTGCCAGAAGGTACTGAAGTACTTGGAGTTAATCTACAAGAAGATGGTACCATTA
TTGTCGATTTGTCAGAAGAATTTACACAGTATGAAGAGAATCAAGAAGTACAAATACTAGAATCTGTGACACATACATTA
ACCCAATTTGAAAGTGTGCATAAAGTTAAATTAAGAGTTAATGGTCAAGATTTAAAAGAAATGCCAGTAAATGGAACGCC
TATTAATTCTGGCTATTCACGAGCAAATGGAATCAATATAATCAACAATGATACACTAGATTATTTACAGAGTGAGCCTG
TAACAATGTATTATCCAGTTGAACAAGAAAATAATCGGTATTATGTACCAGTAACACAGTATATTGAAACGAATGAAGAT
GAAGCAATTGCTAATATAATTAAAGAACTAATCGATGGACCTGGACATCAATCCAAAGTAGTAAACGTATTTAATCCAGA
GGCTGGGCTAGCATCTGAACCAACATTAAATAACGGAATTTTAGAAGTCGTATTTAATAAAGAGATTTTAGCTGATAGTG
AGCAAGGTATTATAGCTGACGAAGTTATGGAAACGATGGTGCGCACACTAACAGAACAGCCAAATATAGATGCAGTTGAT
GTAAAAGTAGAGAATGTGGAAAAAGTTGTAAATGAAAATGGAGAAGCTTATACAGAACCAGTAACAAAACAAGTATTTTC
ACCAAGTGAAGAATTATAA

Upstream 100 bases:

>100_bases
GTAATTCAAAATCATTTATAGGAAATTTATTCTATTATTGGTCTATTTTCTAAGGTGGCTCGTATATATAGTAGTACAAA
CCATCGTGGGAGGTATTTGC

Downstream 100 bases:

>100_bases
ATAATGTTATAATAAAAAAACCTCTATTCCTACATTTTTAAGTAGAATAGAGGTTTTTTAATTTGTTAAGATATGAATAG
TAAGATATAGGGATAATGTT

Product: germination protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 352; Mature: 352

Protein sequence:

>352_residues
MKKRLMLLAGSIGIVTILSGCFEGEQSQTEIDPPQNAQEVDNLDKVDEEDVSATPEETADTVSRDLYLLDANGMVASQTL
ELPVPDTNEVAAQVLEHLVKGGPVTPLLPNGFQAVLPEGTEVLGVNLQEDGTIIVDLSEEFTQYEENQEVQILESVTHTL
TQFESVHKVKLRVNGQDLKEMPVNGTPINSGYSRANGINIINNDTLDYLQSEPVTMYYPVEQENNRYYVPVTQYIETNED
EAIANIIKELIDGPGHQSKVVNVFNPEAGLASEPTLNNGILEVVFNKEILADSEQGIIADEVMETMVRTLTEQPNIDAVD
VKVENVEKVVNENGEAYTEPVTKQVFSPSEEL

Sequences:

>Translated_352_residues
MKKRLMLLAGSIGIVTILSGCFEGEQSQTEIDPPQNAQEVDNLDKVDEEDVSATPEETADTVSRDLYLLDANGMVASQTL
ELPVPDTNEVAAQVLEHLVKGGPVTPLLPNGFQAVLPEGTEVLGVNLQEDGTIIVDLSEEFTQYEENQEVQILESVTHTL
TQFESVHKVKLRVNGQDLKEMPVNGTPINSGYSRANGINIINNDTLDYLQSEPVTMYYPVEQENNRYYVPVTQYIETNED
EAIANIIKELIDGPGHQSKVVNVFNPEAGLASEPTLNNGILEVVFNKEILADSEQGIIADEVMETMVRTLTEQPNIDAVD
VKVENVEKVVNENGEAYTEPVTKQVFSPSEEL
>Mature_352_residues
MKKRLMLLAGSIGIVTILSGCFEGEQSQTEIDPPQNAQEVDNLDKVDEEDVSATPEETADTVSRDLYLLDANGMVASQTL
ELPVPDTNEVAAQVLEHLVKGGPVTPLLPNGFQAVLPEGTEVLGVNLQEDGTIIVDLSEEFTQYEENQEVQILESVTHTL
TQFESVHKVKLRVNGQDLKEMPVNGTPINSGYSRANGINIINNDTLDYLQSEPVTMYYPVEQENNRYYVPVTQYIETNED
EAIANIIKELIDGPGHQSKVVNVFNPEAGLASEPTLNNGILEVVFNKEILADSEQGIIADEVMETMVRTLTEQPNIDAVD
VKVENVEKVVNENGEAYTEPVTKQVFSPSEEL

Specific function: Unknown. Affects both sporulation and germination [H]

COG id: COG5401

COG function: function code R; Spore germination protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR019606 [H]

Pfam domain/function: PF10646 Germane [H]

EC number: NA

Molecular weight: Translated: 38758; Mature: 38758

Theoretical pI: Translated: 3.80; Mature: 3.80

Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS00014 ER_TARGET

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKRLMLLAGSIGIVTILSGCFEGEQSQTEIDPPQNAQEVDNLDKVDEEDVSATPEETAD
CCCEEEEEECCHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHCCCCHHCCCCCHHHHH
TVSRDLYLLDANGMVASQTLELPVPDTNEVAAQVLEHLVKGGPVTPLLPNGFQAVLPEGT
HHHCCEEEEECCCEEEEEEEECCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCEECCCCC
EVLGVNLQEDGTIIVDLSEEFTQYEENQEVQILESVTHTLTQFESVHKVKLRVNGQDLKE
EEEEEEECCCCEEEEECCHHHHHHCCCCHHHHHHHHHHHHHHHHCEEEEEEEECCCCHHH
MPVNGTPINSGYSRANGINIINNDTLDYLQSEPVTMYYPVEQENNRYYVPVTQYIETNED
CCCCCCCCCCCCCCCCCCEEECCCHHHHHCCCCEEEEEECCCCCCEEEEEEHHEECCCCH
EAIANIIKELIDGPGHQSKVVNVFNPEAGLASEPTLNNGILEVVFNKEILADSEQGIIAD
HHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCCCCCEEEEEECHHHHCCCCCCCHHH
EVMETMVRTLTEQPNIDAVDVKVENVEKVVNENGEAYTEPVTKQVFSPSEEL
HHHHHHHHHHHCCCCCCEEEEEHHHHHHHHCCCCCCHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MKKRLMLLAGSIGIVTILSGCFEGEQSQTEIDPPQNAQEVDNLDKVDEEDVSATPEETAD
CCCEEEEEECCHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHCCCCHHCCCCCHHHHH
TVSRDLYLLDANGMVASQTLELPVPDTNEVAAQVLEHLVKGGPVTPLLPNGFQAVLPEGT
HHHCCEEEEECCCEEEEEEEECCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCEECCCCC
EVLGVNLQEDGTIIVDLSEEFTQYEENQEVQILESVTHTLTQFESVHKVKLRVNGQDLKE
EEEEEEECCCCEEEEECCHHHHHHCCCCHHHHHHHHHHHHHHHHCEEEEEEEECCCCHHH
MPVNGTPINSGYSRANGINIINNDTLDYLQSEPVTMYYPVEQENNRYYVPVTQYIETNED
CCCCCCCCCCCCCCCCCCEEECCCHHHHHCCCCEEEEEECCCCCCEEEEEEHHEECCCCH
EAIANIIKELIDGPGHQSKVVNVFNPEAGLASEPTLNNGILEVVFNKEILADSEQGIIAD
HHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCCCCCEEEEEECHHHHCCCCCCCHHH
EVMETMVRTLTEQPNIDAVDVKVENVEKVVNENGEAYTEPVTKQVFSPSEEL
HHHHHHHHHHHCCCCCCEEEEEHHHHHHHHCCCCCCHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8969504; 9384377; 2846748 [H]