Definition | Oceanobacillus iheyensis HTE831, complete genome. |
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Accession | NC_004193 |
Length | 3,630,528 |
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The map label for this gene is fdhC [H]
Identifier: 23098225
GI number: 23098225
Start: 822986
End: 823840
Strand: Direct
Name: fdhC [H]
Synonym: OB0770
Alternate gene names: 23098225
Gene position: 822986-823840 (Clockwise)
Preceding gene: 23098223
Following gene: 23098226
Centisome position: 22.67
GC content: 35.2
Gene sequence:
>855_bases ATGGATGATAATGGTAACAAAGAATCTACAAACCAAACAAAAGAAACGAAAGAAATCCCAGAAAGGCAATTTTTATTTCC AGTCCAGGTAATGCAGTCCTTTAGTAATAAAGGAAAAGAACATCTTGATACAAATACTCCCTCACAGTTAGTGCTTGCAT TAAAAGCAGGTTCATTTATGACCTTTGGCGCTGTCTTTTCTGTATTGTTAGCTATTGGTGTGGATGCAAAAGGACTAACA TATATTTTACAGGGAATTGGCTTTACTGCAGGTTATCTAATGGTATTTATGTCACAATCCGTATTGTTTACGGAAGTTAA TGTTCTTTTGCCAACATATTATTTACAAAAGTCTTACTGGATAAAGCATAAGTTTATCAAATTCTGGGCGGTCGCATATA TTGGCAATCTTATAGGTGCGTTATTTGTGGCGTTATTAATTATTATCTCAAACTCTTTAACACCTGAATTCTCAAAAGAG CTTGAAACACTAATCTCACATAAAATGAAATTTGCCGATTATGGATGGGCAGGCTGGTTCCAAGTACTGCTGTCAGGAAT TTTAGCCAATTGGCTTATCGGTATGGCTACATTTCTAACAACATCTGCTAGGGACGTAGTAGGTAAGATATTAGGAACAG CTCTTCCAGTTATTTTGTTTGTGGCAGGTAATTTTCAACATAGTGCAGCAAATATGGGATATTTCAGTTTAGGGATTTTA ACATCTGATAACTATGCGTGGTATGAATATATATTGTTAAATTTAATCCCAGCTAGTATCGGAAATATTATTGGTGGAGC TATATTCATCTCCTTGTTGTTCTTATATGCTTTTCGGAAAGAGATGCGAAGCTAA
Upstream 100 bases:
>100_bases AAAGAATGAATGTATAATTATTCGGGTACATATATGGATAGGCTTTTAAGATATTAATTGTCCCAATTAACATAAAGTCA ATGAAAATTGGAGGATATTT
Downstream 100 bases:
>100_bases ACAAATTTATGGATCTCTCTAACCTGAAAAAGTGTGACGTTTATTGTCTCTCTTTTTTAGGCCTTTTACCTAAAATGTAC AACTAAATAAATTATTACTA
Product: formate dehydrogenase
Products: CO2; NADH
Alternate protein names: NA
Number of amino acids: Translated: 284; Mature: 284
Protein sequence:
>284_residues MDDNGNKESTNQTKETKEIPERQFLFPVQVMQSFSNKGKEHLDTNTPSQLVLALKAGSFMTFGAVFSVLLAIGVDAKGLT YILQGIGFTAGYLMVFMSQSVLFTEVNVLLPTYYLQKSYWIKHKFIKFWAVAYIGNLIGALFVALLIIISNSLTPEFSKE LETLISHKMKFADYGWAGWFQVLLSGILANWLIGMATFLTTSARDVVGKILGTALPVILFVAGNFQHSAANMGYFSLGIL TSDNYAWYEYILLNLIPASIGNIIGGAIFISLLFLYAFRKEMRS
Sequences:
>Translated_284_residues MDDNGNKESTNQTKETKEIPERQFLFPVQVMQSFSNKGKEHLDTNTPSQLVLALKAGSFMTFGAVFSVLLAIGVDAKGLT YILQGIGFTAGYLMVFMSQSVLFTEVNVLLPTYYLQKSYWIKHKFIKFWAVAYIGNLIGALFVALLIIISNSLTPEFSKE LETLISHKMKFADYGWAGWFQVLLSGILANWLIGMATFLTTSARDVVGKILGTALPVILFVAGNFQHSAANMGYFSLGIL TSDNYAWYEYILLNLIPASIGNIIGGAIFISLLFLYAFRKEMRS >Mature_284_residues MDDNGNKESTNQTKETKEIPERQFLFPVQVMQSFSNKGKEHLDTNTPSQLVLALKAGSFMTFGAVFSVLLAIGVDAKGLT YILQGIGFTAGYLMVFMSQSVLFTEVNVLLPTYYLQKSYWIKHKFIKFWAVAYIGNLIGALFVALLIIISNSLTPEFSKE LETLISHKMKFADYGWAGWFQVLLSGILANWLIGMATFLTTSARDVVGKILGTALPVILFVAGNFQHSAANMGYFSLGIL TSDNYAWYEYILLNLIPASIGNIIGGAIFISLLFLYAFRKEMRS
Specific function: May act as a formate transporter [H]
COG id: COG2116
COG function: function code P; Formate/nitrite family of transporters
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the FNT transporter (TC 2.A.44) family [H]
Homologues:
Organism=Escherichia coli, GI1787132, Length=282, Percent_Identity=26.5957446808511, Blast_Score=88, Evalue=5e-19, Organism=Escherichia coli, GI1788837, Length=258, Percent_Identity=25.968992248062, Blast_Score=70, Evalue=1e-13, Organism=Saccharomyces cerevisiae, GI6321779, Length=226, Percent_Identity=28.3185840707965, Blast_Score=74, Evalue=2e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000292 [H]
Pfam domain/function: PF01226 Form_Nir_trans [H]
EC number: 1.2.1.2
Molecular weight: Translated: 31603; Mature: 31603
Theoretical pI: Translated: 9.05; Mature: 9.05
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDDNGNKESTNQTKETKEIPERQFLFPVQVMQSFSNKGKEHLDTNTPSQLVLALKAGSFM CCCCCCCCCCCHHHHHHHCCHHHHHHHHHHHHHHHHCCHHHCCCCCHHHHHHHHHCCCHH TFGAVFSVLLAIGVDAKGLTYILQGIGFTAGYLMVFMSQSVLFTEVNVLLPTYYLQKSYW HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IKHKFIKFWAVAYIGNLIGALFVALLIIISNSLTPEFSKELETLISHKMKFADYGWAGWF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCHHHHH QVLLSGILANWLIGMATFLTTSARDVVGKILGTALPVILFVAGNFQHSAANMGYFSLGIL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCEEEEEEE TSDNYAWYEYILLNLIPASIGNIIGGAIFISLLFLYAFRKEMRS ECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MDDNGNKESTNQTKETKEIPERQFLFPVQVMQSFSNKGKEHLDTNTPSQLVLALKAGSFM CCCCCCCCCCCHHHHHHHCCHHHHHHHHHHHHHHHHCCHHHCCCCCHHHHHHHHHCCCHH TFGAVFSVLLAIGVDAKGLTYILQGIGFTAGYLMVFMSQSVLFTEVNVLLPTYYLQKSYW HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IKHKFIKFWAVAYIGNLIGALFVALLIIISNSLTPEFSKELETLISHKMKFADYGWAGWF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCHHHHH QVLLSGILANWLIGMATFLTTSARDVVGKILGTALPVILFVAGNFQHSAANMGYFSLGIL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCEEEEEEE TSDNYAWYEYILLNLIPASIGNIIGGAIFISLLFLYAFRKEMRS ECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: formate; NAD+
Specific reaction: formate + NAD+ = CO2 + NADH
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9006048 [H]