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The map label for this gene is ysmA [H]

Identifier: 229918345

GI number: 229918345

Start: 2596460

End: 2596900

Strand: Direct

Name: ysmA [H]

Synonym: EAT1b_2630

Alternate gene names: 229918345

Gene position: 2596460-2596900 (Clockwise)

Preceding gene: 229918344

Following gene: 229918346

Centisome position: 86.55

GC content: 48.98

Gene sequence:

>441_bases
ATGACCAAGTACTTTCGAGAGCCAGGTTGGGAAACACGTGTCAAAAGAGGGATCGCGCTCGATGTGAAAGTTCGCTTTTC
GGAGTGCGACCCGTATGGTCACATGAACAATACAATTCCGTTCATCTATTTCGAAGATGCCCGGATCGAGTTGTTAGAGG
CGACAGGATTCTCCTTGAAGGACGGATTCGTCGTCGTCGCCGATGCGCAATGTGACTATGTTCGACAAGTCATGCCACGT
CAACAGCTGACTGTGCATGCCAATATCTTGACGGTCGGAAACACTTCATGTGATATTCATTACGGGGCATATGACGGAGA
GCAACTCCTCTTCGCCGGACGGACAAGCCTCGTTCATTTAACGAAGGAAGGCCGTCCTACGGAATGGACTCCGGAATATA
AAAACCGCTTGCAGAATTTTTGCGAATCCGCTATCATTTGA

Upstream 100 bases:

>100_bases
TCGCTTCGATGAACCGTCAAACGACGCTTCACTCGTTCAAACAGTTCTTCGGTAGTGACAAAGGTCGCACCGGTTCTGCG
GTCGAGGCGTAAGCGAGCCG

Downstream 100 bases:

>100_bases
TAATGAGTTCACAAACAAAAAATATTCTGCTGGTTCGCCTGTAGAATTGAATTTTGAAGGGAGACCATCATCTCATGGAA
AAAACGTTCACAGTCGTTGC

Product: thioesterase superfamily protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 146; Mature: 145

Protein sequence:

>146_residues
MTKYFREPGWETRVKRGIALDVKVRFSECDPYGHMNNTIPFIYFEDARIELLEATGFSLKDGFVVVADAQCDYVRQVMPR
QQLTVHANILTVGNTSCDIHYGAYDGEQLLFAGRTSLVHLTKEGRPTEWTPEYKNRLQNFCESAII

Sequences:

>Translated_146_residues
MTKYFREPGWETRVKRGIALDVKVRFSECDPYGHMNNTIPFIYFEDARIELLEATGFSLKDGFVVVADAQCDYVRQVMPR
QQLTVHANILTVGNTSCDIHYGAYDGEQLLFAGRTSLVHLTKEGRPTEWTPEYKNRLQNFCESAII
>Mature_145_residues
TKYFREPGWETRVKRGIALDVKVRFSECDPYGHMNNTIPFIYFEDARIELLEATGFSLKDGFVVVADAQCDYVRQVMPRQ
QLTVHANILTVGNTSCDIHYGAYDGEQLLFAGRTSLVHLTKEGRPTEWTPEYKNRLQNFCESAII

Specific function: Unknown

COG id: COG0824

COG function: function code R; Predicted thioesterase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006683 [H]

Pfam domain/function: PF03061 4HBT [H]

EC number: NA

Molecular weight: Translated: 16771; Mature: 16640

Theoretical pI: Translated: 6.10; Mature: 6.10

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.7 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
2.8 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTKYFREPGWETRVKRGIALDVKVRFSECDPYGHMNNTIPFIYFEDARIELLEATGFSLK
CCCCCCCCCHHHHHHCCEEEEEEEEEECCCCCCCCCCCCCEEEECCCEEEEEEECCCEEC
DGFVVVADAQCDYVRQVMPRQQLTVHANILTVGNTSCDIHYGAYDGEQLLFAGRTSLVHL
CCEEEEECCCCHHHHHHCCCCCEEEEEEEEEECCCEEEEEECCCCCCEEEEECCCEEEEE
TKEGRPTEWTPEYKNRLQNFCESAII
ECCCCCCCCCHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
TKYFREPGWETRVKRGIALDVKVRFSECDPYGHMNNTIPFIYFEDARIELLEATGFSLK
CCCCCCCCHHHHHHCCEEEEEEEEEECCCCCCCCCCCCCEEEECCCEEEEEEECCCEEC
DGFVVVADAQCDYVRQVMPRQQLTVHANILTVGNTSCDIHYGAYDGEQLLFAGRTSLVHL
CCEEEEECCCCHHHHHHCCCCCEEEEEEEEEECCCEEEEEECCCCCCEEEEECCCEEEEE
TKEGRPTEWTPEYKNRLQNFCESAII
ECCCCCCCCCHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 3114423; 8969504; 9384377 [H]