Definition | Exiguobacterium sp. AT1b, complete genome. |
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Accession | NC_012673 |
Length | 2,999,895 |
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The map label for this gene is phnB [H]
Identifier: 229918242
GI number: 229918242
Start: 2484996
End: 2485409
Strand: Reverse
Name: phnB [H]
Synonym: EAT1b_2523
Alternate gene names: 229918242
Gene position: 2485409-2484996 (Counterclockwise)
Preceding gene: 229918245
Following gene: 229918230
Centisome position: 82.85
GC content: 55.31
Gene sequence:
>414_bases ATGCCGATCAATCCGTATCTCAACTTTAATGGGAATTGCCGCGACGCCGTGAACTTCTATGCCGATGTGTTCAACCACGC TGCTCCAGACATCATGACGTTCGGTGATCAACCTGGTCCAGACGGTCAACCGGTGCCGAGTGAAATGGCCAATCTCGTGC TGCATACCCGACTCTCGATTCACGGCTCATCGCTCATGTTTTCCGATGCGATGCCTGACGGACCGGTCACGTTCGGGGAC AATGTCACGCTCGCCGTCGTCACGGACGACCTCGATGCCATCCACCGTGAGTTCGAGGCGCTCTCTGTGAACGGACGTGT TTTGATGCCGCTCCAAGAAACGTTTTGGAGCAAGGCGTACGGCATGCTCGAAGATCAGTTCGGTGTCCAATGGCAGTTCA GCCACGAAGCATAA
Upstream 100 bases:
>100_bases AATCGCGTTCAACCTATACGATGTAATTTAGTTAGACACATTTGCATTTTGCGAACATATGTTCTATAATGAATATTATG AATCCGAGGAGGAACTTGCT
Downstream 100 bases:
>100_bases GAACGACAAAAATCCCCGATTCTGCCGAATCGGGGATTTGCTTATTTTTGGGCAACGAAGAAGATGCGCTCGGCATCCGC TCCTGGTGCATGTTCGGTAA
Product: 3-demethylubiquinone-9 3-methyltransferase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 137; Mature: 136
Protein sequence:
>137_residues MPINPYLNFNGNCRDAVNFYADVFNHAAPDIMTFGDQPGPDGQPVPSEMANLVLHTRLSIHGSSLMFSDAMPDGPVTFGD NVTLAVVTDDLDAIHREFEALSVNGRVLMPLQETFWSKAYGMLEDQFGVQWQFSHEA
Sequences:
>Translated_137_residues MPINPYLNFNGNCRDAVNFYADVFNHAAPDIMTFGDQPGPDGQPVPSEMANLVLHTRLSIHGSSLMFSDAMPDGPVTFGD NVTLAVVTDDLDAIHREFEALSVNGRVLMPLQETFWSKAYGMLEDQFGVQWQFSHEA >Mature_136_residues PINPYLNFNGNCRDAVNFYADVFNHAAPDIMTFGDQPGPDGQPVPSEMANLVLHTRLSIHGSSLMFSDAMPDGPVTFGDN VTLAVVTDDLDAIHREFEALSVNGRVLMPLQETFWSKAYGMLEDQFGVQWQFSHEA
Specific function: Unknown
COG id: COG2764
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1790546, Length=137, Percent_Identity=35.036496350365, Blast_Score=96, Evalue=1e-21,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15178; Mature: 15047
Theoretical pI: Translated: 4.09; Mature: 4.09
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 5.1 %Met (Translated Protein) 5.8 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 4.4 %Met (Mature Protein) 5.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPINPYLNFNGNCRDAVNFYADVFNHAAPDIMTFGDQPGPDGQPVPSEMANLVLHTRLSI CCCCCCCCCCCCCHHHHHHHHHHHHCCCCCEEECCCCCCCCCCCCHHHHHHHHHHHHEEE HGSSLMFSDAMPDGPVTFGDNVTLAVVTDDLDAIHREFEALSVNGRVLMPLQETFWSKAY CCCEEEEECCCCCCCEEECCCEEEEEEECCHHHHHHHHHHEECCCEEEECHHHHHHHHHH GMLEDQFGVQWQFSHEA CCCCCCCCCEEEECCCC >Mature Secondary Structure PINPYLNFNGNCRDAVNFYADVFNHAAPDIMTFGDQPGPDGQPVPSEMANLVLHTRLSI CCCCCCCCCCCCHHHHHHHHHHHHCCCCCEEECCCCCCCCCCCCHHHHHHHHHHHHEEE HGSSLMFSDAMPDGPVTFGDNVTLAVVTDDLDAIHREFEALSVNGRVLMPLQETFWSKAY CCCEEEEECCCCCCCEEECCCEEEEEEECCHHHHHHHHHHEECCCEEEECHHHHHHHHHH GMLEDQFGVQWQFSHEA CCCCCCCCCEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 2155230; 7610040; 9278503 [H]