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The map label for this gene is yitU [H]

Identifier: 229918230

GI number: 229918230

Start: 2477233

End: 2478045

Strand: Reverse

Name: yitU [H]

Synonym: EAT1b_2511

Alternate gene names: 229918230

Gene position: 2478045-2477233 (Counterclockwise)

Preceding gene: 229918242

Following gene: 229918221

Centisome position: 82.6

GC content: 50.55

Gene sequence:

>813_bases
ATGTCACGTTATTTAATCGCAGTCGATTTAGATGGAACGTTATTAAGAGATGATAAAACAATCAGCGAACGAAACCTCCG
CGCTCTTCAAGCAGCGCGTGAAGCTGGTCATGAAGTCATGATCGCCACAGGGCGTCCAAAGCGCCATTCAATCATGTACT
ATGAGCAAATGGGATTGACGACACCGCTCGTCAACTTCAACGGGGCGCTCGTACACCATCCAAAAGATGCAAGCTATGCG
GTGACACACCGCCCAATCCCGCTCAAGACCGCCCATGACATCATTGAAGAAGTGGCGGATACGAAAGCACACAACATCGT
CGTCGAAGTGACGGACCACGTGTACTTCCAAAAGGACCCGCAAGAGTTCTATAGTCCGTATGCAGAACGTGCGCTCAGCG
TCACATCAGGTAACTTGTTGAAACACTTGCAGGACGAACCGACGTCCCTATTGATTCATGCGACAAAAGATCACGTCGCG
CACGTCCGCTCCCAACTCGATGACATTCATGCGGAGGCGGTATTGAACCGTCAGTGGCGTATGCCCGAACATATGATTGA
AGTCATGAGCAAGAACACATCGAAGGCACTTGGGCTTCAAGAGGTCTCGAAGCACTTGAACATCGACCGGAAGCACATTA
TCGCGTTCGGTGACGAAGAGAACGACCTCGAGATGCTCGACTATGTCGGTACCGGTGTCGCGATGGGGAACGCCATCGAC
CAATTGAAGAATGTAGCCAACGAAGTGACGGCTTCAAATATGGATGACGGAATCGCCCTCTTCTTAGAAGAGCGACTTGG
CATCAAAGCATAA

Upstream 100 bases:

>100_bases
TTCGAATAGAATATGCGACTTCGATTGTATATTCTTTCCGTCAAATCGAAAAATGTGATACGGTCTTAGAAACATCATTG
TGAAGAAAAGAGGATGACTG

Downstream 100 bases:

>100_bases
CGAAAGCACCGACTAGAACTGAACCATTATCAAACAGAGGCTTTTCTTCCTGATTAGGATGAATTGCCTCTGTTTTTGTA
TCTGTGCATACGCCGGATTT

Product: Cof-like hydrolase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 270; Mature: 269

Protein sequence:

>270_residues
MSRYLIAVDLDGTLLRDDKTISERNLRALQAAREAGHEVMIATGRPKRHSIMYYEQMGLTTPLVNFNGALVHHPKDASYA
VTHRPIPLKTAHDIIEEVADTKAHNIVVEVTDHVYFQKDPQEFYSPYAERALSVTSGNLLKHLQDEPTSLLIHATKDHVA
HVRSQLDDIHAEAVLNRQWRMPEHMIEVMSKNTSKALGLQEVSKHLNIDRKHIIAFGDEENDLEMLDYVGTGVAMGNAID
QLKNVANEVTASNMDDGIALFLEERLGIKA

Sequences:

>Translated_270_residues
MSRYLIAVDLDGTLLRDDKTISERNLRALQAAREAGHEVMIATGRPKRHSIMYYEQMGLTTPLVNFNGALVHHPKDASYA
VTHRPIPLKTAHDIIEEVADTKAHNIVVEVTDHVYFQKDPQEFYSPYAERALSVTSGNLLKHLQDEPTSLLIHATKDHVA
HVRSQLDDIHAEAVLNRQWRMPEHMIEVMSKNTSKALGLQEVSKHLNIDRKHIIAFGDEENDLEMLDYVGTGVAMGNAID
QLKNVANEVTASNMDDGIALFLEERLGIKA
>Mature_269_residues
SRYLIAVDLDGTLLRDDKTISERNLRALQAAREAGHEVMIATGRPKRHSIMYYEQMGLTTPLVNFNGALVHHPKDASYAV
THRPIPLKTAHDIIEEVADTKAHNIVVEVTDHVYFQKDPQEFYSPYAERALSVTSGNLLKHLQDEPTSLLIHATKDHVAH
VRSQLDDIHAEAVLNRQWRMPEHMIEVMSKNTSKALGLQEVSKHLNIDRKHIIAFGDEENDLEMLDYVGTGVAMGNAIDQ
LKNVANEVTASNMDDGIALFLEERLGIKA

Specific function: Unknown

COG id: COG0561

COG function: function code R; Predicted hydrolases of the HAD superfamily

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the HAD-like hydrolase superfamily. Cof family [H]

Homologues:

Organism=Escherichia coli, GI1786982, Length=276, Percent_Identity=29.3478260869565, Blast_Score=101, Evalue=5e-23,
Organism=Escherichia coli, GI2367265, Length=291, Percent_Identity=28.5223367697594, Blast_Score=97, Evalue=2e-21,
Organism=Escherichia coli, GI48994981, Length=269, Percent_Identity=26.7657992565056, Blast_Score=73, Evalue=2e-14,
Organism=Escherichia coli, GI1787043, Length=271, Percent_Identity=26.5682656826568, Blast_Score=64, Evalue=1e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR023214
- InterPro:   IPR013200
- InterPro:   IPR006379
- InterPro:   IPR000150 [H]

Pfam domain/function: PF08282 Hydrolase_3 [H]

EC number: NA

Molecular weight: Translated: 30328; Mature: 30197

Theoretical pI: Translated: 6.07; Mature: 6.07

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSRYLIAVDLDGTLLRDDKTISERNLRALQAAREAGHEVMIATGRPKRHSIMYYEQMGLT
CCCEEEEEECCCEEECCCCCHHHHHHHHHHHHHHCCCEEEEECCCCCCCEEEEEHHCCCC
TPLVNFNGALVHHPKDASYAVTHRPIPLKTAHDIIEEVADTKAHNIVVEVTDHVYFQKDP
CCEECCCCEEEECCCCCCEEEECCCCCCHHHHHHHHHHHCCCCCEEEEEEECCEEECCCH
QEFYSPYAERALSVTSGNLLKHLQDEPTSLLIHATKDHVAHVRSQLDDIHAEAVLNRQWR
HHHHCHHHHHHHHCCCCHHHHHHCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHCCCC
MPEHMIEVMSKNTSKALGLQEVSKHLNIDRKHIIAFGDEENDLEMLDYVGTGVAMGNAID
CHHHHHHHHHCCCHHHHCHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHCCHHHHHHHH
QLKNVANEVTASNMDDGIALFLEERLGIKA
HHHHHHHHHHHCCCCCHHHHHHHHHCCCCC
>Mature Secondary Structure 
SRYLIAVDLDGTLLRDDKTISERNLRALQAAREAGHEVMIATGRPKRHSIMYYEQMGLT
CCEEEEEECCCEEECCCCCHHHHHHHHHHHHHHCCCEEEEECCCCCCCEEEEEHHCCCC
TPLVNFNGALVHHPKDASYAVTHRPIPLKTAHDIIEEVADTKAHNIVVEVTDHVYFQKDP
CCEECCCCEEEECCCCCCEEEECCCCCCHHHHHHHHHHHCCCCCEEEEEEECCEEECCCH
QEFYSPYAERALSVTSGNLLKHLQDEPTSLLIHATKDHVAHVRSQLDDIHAEAVLNRQWR
HHHHCHHHHHHHHCCCCHHHHHHCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHCCCC
MPEHMIEVMSKNTSKALGLQEVSKHLNIDRKHIIAFGDEENDLEMLDYVGTGVAMGNAID
CHHHHHHHHHCCCHHHHCHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHCCHHHHHHHH
QLKNVANEVTASNMDDGIALFLEERLGIKA
HHHHHHHHHHHCCCCCHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9353931; 9025291; 9384377 [H]